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The map label for this gene is hypA [H]

Identifier: 74317400

GI number: 74317400

Start: 1461050

End: 1461466

Strand: Direct

Name: hypA [H]

Synonym: Tbd_1382

Alternate gene names: 74317400

Gene position: 1461050-1461466 (Clockwise)

Preceding gene: 74317399

Following gene: 74317401

Centisome position: 50.21

GC content: 68.11

Gene sequence:

>417_bases
ATGCGCGCAGCGCGTGGGAATTGCTCGACCAGATCCTGGAGGAAAACGGTGCATGAGCTGTCGATCGCGCAGGCGCTGGT
CGAGCAGGTCGAAGCGGTGATTCGCACGCATCACGCGCTCCGGGCGAGCCTCATTCGCGTGCGCGTCGGGCCCTTGGCCG
GTGTCGTGCCCGAGCTGCTGGCGCATGCCTTTCCGCTCGCCGCCGCCGGCAGCCGCATGGAGCACGCGGAACTCGCCCTC
GTCAAGGCCCCGGTCCGGGTGCTGTGCGAGCGCTGCGGCGCGGAAAGCGAAGCGGCGATGAACCGGCTGCTGTGCGCCGA
ATGCGGGGACTGGCATACCCGCATCGTCTCCGGAGACGAATTGCTGCTCGAAAGCGTCGAACTCGAAACCGCCGCTTCCC
CGTCCCCTGCATCCTGA

Upstream 100 bases:

>100_bases
CGCGACGTCAGCCTGTTCATGATGCAGGATGCGCCGCCCGAGGTGGGCGACTTCGTCATGGTGCATGTGGGCTACGCGAT
CCAGAAGGTCACCGAAGCCG

Downstream 100 bases:

>100_bases
GCCCCCCGAAAAATGTGCGACACCTGCGGCTGCAACCTCACCCCGGGCAACAGGCATCTTGCCTACAAGCCGGTCGCCCG
CGGCGCGACCGCGGTTTCCG

Product: hydrogenase expression/formation protein HypA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MRAARGNCSTRSWRKTVHELSIAQALVEQVEAVIRTHHALRASLIRVRVGPLAGVVPELLAHAFPLAAAGSRMEHAELAL
VKAPVRVLCERCGAESEAAMNRLLCAECGDWHTRIVSGDELLLESVELETAASPSPAS

Sequences:

>Translated_138_residues
MRAARGNCSTRSWRKTVHELSIAQALVEQVEAVIRTHHALRASLIRVRVGPLAGVVPELLAHAFPLAAAGSRMEHAELAL
VKAPVRVLCERCGAESEAAMNRLLCAECGDWHTRIVSGDELLLESVELETAASPSPAS
>Mature_138_residues
MRAARGNCSTRSWRKTVHELSIAQALVEQVEAVIRTHHALRASLIRVRVGPLAGVVPELLAHAFPLAAAGSRMEHAELAL
VKAPVRVLCERCGAESEAAMNRLLCAECGDWHTRIVSGDELLLESVELETAASPSPAS

Specific function: Probably plays a role in an hydrogenase nickel cofactor insertion step [H]

COG id: COG0375

COG function: function code R; Zn finger protein HypA/HybF (possibly regulating hydrogenase expression)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hypA/hybF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000688 [H]

Pfam domain/function: PF01155 HypA [H]

EC number: NA

Molecular weight: Translated: 14824; Mature: 14824

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: PS01249 HYPA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAARGNCSTRSWRKTVHELSIAQALVEQVEAVIRTHHALRASLIRVRVGPLAGVVPELL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
AHAFPLAAAGSRMEHAELALVKAPVRVLCERCGAESEAAMNRLLCAECGDWHTRIVSGDE
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHCCCHH
LLLESVELETAASPSPAS
HHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRAARGNCSTRSWRKTVHELSIAQALVEQVEAVIRTHHALRASLIRVRVGPLAGVVPELL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
AHAFPLAAAGSRMEHAELALVKAPVRVLCERCGAESEAAMNRLLCAECGDWHTRIVSGDE
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHCCCHH
LLLESVELETAASPSPAS
HHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA