| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is ylcC [C]
Identifier: 74317344
GI number: 74317344
Start: 1405824
End: 1406228
Strand: Direct
Name: ylcC [C]
Synonym: Tbd_1326
Alternate gene names: 74317344
Gene position: 1405824-1406228 (Clockwise)
Preceding gene: 74317343
Following gene: 74317357
Centisome position: 48.31
GC content: 57.28
Gene sequence:
>405_bases ATGGAAAAGACTTTTCCGCTTCTGCTCAACAACGCAATCGAAAGGAACGCAATCATGAAAGGCGTATTTTTGTTAGGGCT TTCCAGCATGGTCGTTCTAGGGATGGGGCTCGCTCATGCCGCGCCGGCCGGCTCGGCCGAACCGCTCAGGGTCGCGGCGG CCGATGCGAAACAGGCGGCGGTGTCGGGAACCGGCGTCGTCGAGCAGGTCAAGGCCGAACAGAGCAAGATCAAGATCAAC CATGAGCCGATCCCGGCACTGGATTGGCCCTCGATGTCCATGTACTTCCGCGTCAAGGACAAGGCTGTTCTGGAAGGCAT AGCCACCGGGGACAAGGTGCAGTTCGATTTGGAGAAAGGCAAGACGGGTTTGGAAATCACCCGAATCGAGAAAGTGTCCC AGTGA
Upstream 100 bases:
>100_bases GCGGGATGCGGGCGAGGACGTCTCGGACACGCGGCTGGTCGCAGGCCTGCGCTTCTGGTTCTGACCCATTTTTTTTGGAT CGACTTCGATGGAGGAACGT
Downstream 100 bases:
>100_bases CGCTGCCGGCGAGAGTGAACTCCGCGTCCAATCCCCGATGCGTTCCACGTCATTTACCTCTGCGCCAATAGTAATTGCTG CGCGGTGAACTCAAGGTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MEKTFPLLLNNAIERNAIMKGVFLLGLSSMVVLGMGLAHAAPAGSAEPLRVAAADAKQAAVSGTGVVEQVKAEQSKIKIN HEPIPALDWPSMSMYFRVKDKAVLEGIATGDKVQFDLEKGKTGLEITRIEKVSQ
Sequences:
>Translated_134_residues MEKTFPLLLNNAIERNAIMKGVFLLGLSSMVVLGMGLAHAAPAGSAEPLRVAAADAKQAAVSGTGVVEQVKAEQSKIKIN HEPIPALDWPSMSMYFRVKDKAVLEGIATGDKVQFDLEKGKTGLEITRIEKVSQ >Mature_134_residues MEKTFPLLLNNAIERNAIMKGVFLLGLSSMVVLGMGLAHAAPAGSAEPLRVAAADAKQAAVSGTGVVEQVKAEQSKIKIN HEPIPALDWPSMSMYFRVKDKAVLEGIATGDKVQFDLEKGKTGLEITRIEKVSQ
Specific function: Unknown
COG id: COG5569
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786786, Length=81, Percent_Identity=38.2716049382716, Blast_Score=62, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14331; Mature: 14331
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKTFPLLLNNAIERNAIMKGVFLLGLSSMVVLGMGLAHAAPAGSAEPLRVAAADAKQAA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCEEEEECCCHHHH VSGTGVVEQVKAEQSKIKINHEPIPALDWPSMSMYFRVKDKAVLEGIATGDKVQFDLEKG CCCCCHHHHHHHHHHEEEECCCCCCCCCCCCCEEEEEECCHHHHHHCCCCCEEEEECCCC KTGLEITRIEKVSQ CCCCEEEEEECCCC >Mature Secondary Structure MEKTFPLLLNNAIERNAIMKGVFLLGLSSMVVLGMGLAHAAPAGSAEPLRVAAADAKQAA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCEEEEECCCHHHH VSGTGVVEQVKAEQSKIKINHEPIPALDWPSMSMYFRVKDKAVLEGIATGDKVQFDLEKG CCCCCHHHHHHHHHHEEEECCCCCCCCCCCCCEEEEEECCHHHHHHCCCCCEEEEECCCC KTGLEITRIEKVSQ CCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA