| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317334
Identifier: 74317334
GI number: 74317334
Start: 1397775
End: 1398677
Strand: Direct
Name: 74317334
Synonym: Tbd_1316
Alternate gene names: NA
Gene position: 1397775-1398677 (Clockwise)
Preceding gene: 74317333
Following gene: 74317335
Centisome position: 48.04
GC content: 50.06
Gene sequence:
>903_bases ATGGCTACATATAATCAGTTGCGTCACGTTGAATTGTCTGCAGAAGCTCGGGCGTCCATGCTGAGTCGTCATCCCATTGT CGCTAAGGATTACACCGTTCTTACGCCGATGATCAAAGCCACTTATGGATTGGTGCGGGAACGGGTCTGGACTCGCCGGA CAGGATCATTTCTGTATGCGCGCCCGAGGACTGGAAAGACCCGCTGCGCAATGGCTATCAGACGCCTCCTTGCTACGGAG TTTCAAGATATCCATATTATGTTTCTCAGCGCGGATAAGCGAGGTAGCACTTCAGACCTAGGGTTTGTATTGGATTTGCT GTCGTCTGAAGAACTGGTGATCAATAAACGCATCTCCTACAGGGAAGCTCTATTAAAACTACTGACGCATATTGAAACCA ATCTGGCGTCCCGGGCAGGAAATCACCTTGTACTGTTGGTTGACGAACTACAACTGTTATGTGAGGCAGATTTCAGACTG CTTCTCGTAATACATAACCGCTTGGAGCAAAAGAAAATAGCAATGACGACATTGGGGTTTAGTCAGCCAGAAATTCTTCA TGTGCGCACAGCACTCGCAACATCACATTCATTCAACCTCATTGCTCGTTTTCTAAGCGAACCTATCGTATTTGATGGAT GCGCCGGTCGTGCGGACCTAGAGGTCATCCTCGAAGCATACGATACGGAAAAGTGCTATCCCGAGGACACTGACTGGGCG TACACGCGCTTTTTTTACCTGAAGCATATAAGGCAGGGTTTCGTCTTAGAGGGTATGCCGAAACGATCTGGGCCTCGCTT AAGGCGGCCTCCGATCCGCTCCCGCACGGGACTGTTCCAATGGAACATCTTACCCGGACCGTCGAGCATCTCTTGCTTGC AAGCCGCAAGGCGGACGCAATAG
Upstream 100 bases:
>100_bases AGAAACTGTATCCTCTGAAGAAAGTGGAACTCTGATGGACAAACCGCCGCCGGATTTAAACGAACTTATTAATCGCCAGC GATAGCGCAGCCGACGGTCT
Downstream 100 bases:
>100_bases ATTTCGAATTGACGCCGAAGCTAGTTGAAGAGGCGGTAGATGCGAGCAATCTTAGATATTTCTCTGGTTTGATGACAGAA AAGTAGACCCATGCTGTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MATYNQLRHVELSAEARASMLSRHPIVAKDYTVLTPMIKATYGLVRERVWTRRTGSFLYARPRTGKTRCAMAIRRLLATE FQDIHIMFLSADKRGSTSDLGFVLDLLSSEELVINKRISYREALLKLLTHIETNLASRAGNHLVLLVDELQLLCEADFRL LLVIHNRLEQKKIAMTTLGFSQPEILHVRTALATSHSFNLIARFLSEPIVFDGCAGRADLEVILEAYDTEKCYPEDTDWA YTRFFYLKHIRQGFVLEGMPKRSGPRLRRPPIRSRTGLFQWNILPGPSSISCLQAARRTQ
Sequences:
>Translated_300_residues MATYNQLRHVELSAEARASMLSRHPIVAKDYTVLTPMIKATYGLVRERVWTRRTGSFLYARPRTGKTRCAMAIRRLLATE FQDIHIMFLSADKRGSTSDLGFVLDLLSSEELVINKRISYREALLKLLTHIETNLASRAGNHLVLLVDELQLLCEADFRL LLVIHNRLEQKKIAMTTLGFSQPEILHVRTALATSHSFNLIARFLSEPIVFDGCAGRADLEVILEAYDTEKCYPEDTDWA YTRFFYLKHIRQGFVLEGMPKRSGPRLRRPPIRSRTGLFQWNILPGPSSISCLQAARRTQ >Mature_299_residues ATYNQLRHVELSAEARASMLSRHPIVAKDYTVLTPMIKATYGLVRERVWTRRTGSFLYARPRTGKTRCAMAIRRLLATEF QDIHIMFLSADKRGSTSDLGFVLDLLSSEELVINKRISYREALLKLLTHIETNLASRAGNHLVLLVDELQLLCEADFRLL LVIHNRLEQKKIAMTTLGFSQPEILHVRTALATSHSFNLIARFLSEPIVFDGCAGRADLEVILEAYDTEKCYPEDTDWAY TRFFYLKHIRQGFVLEGMPKRSGPRLRRPPIRSRTGLFQWNILPGPSSISCLQAARRTQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34319; Mature: 34188
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATYNQLRHVELSAEARASMLSRHPIVAKDYTVLTPMIKATYGLVRERVWTRRTGSFLYA CCCHHHHEEEEECHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE RPRTGKTRCAMAIRRLLATEFQDIHIMFLSADKRGSTSDLGFVLDLLSSEELVINKRISY CCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCEEECCCHHH REALLKLLTHIETNLASRAGNHLVLLVDELQLLCEADFRLLLVIHNRLEQKKIAMTTLGF HHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCC SQPEILHVRTALATSHSFNLIARFLSEPIVFDGCAGRADLEVILEAYDTEKCYPEDTDWA CCCHHEEHHHHHHHCCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCCHH YTRFFYLKHIRQGFVLEGMPKRSGPRLRRPPIRSRTGLFQWNILPGPSSISCLQAARRTQ HHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCC >Mature Secondary Structure ATYNQLRHVELSAEARASMLSRHPIVAKDYTVLTPMIKATYGLVRERVWTRRTGSFLYA CCHHHHEEEEECHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE RPRTGKTRCAMAIRRLLATEFQDIHIMFLSADKRGSTSDLGFVLDLLSSEELVINKRISY CCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCEEECCCHHH REALLKLLTHIETNLASRAGNHLVLLVDELQLLCEADFRLLLVIHNRLEQKKIAMTTLGF HHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCC SQPEILHVRTALATSHSFNLIARFLSEPIVFDGCAGRADLEVILEAYDTEKCYPEDTDWA CCCHHEEHHHHHHHCCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCCHH YTRFFYLKHIRQGFVLEGMPKRSGPRLRRPPIRSRTGLFQWNILPGPSSISCLQAARRTQ HHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA