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The map label for this gene is scpB [H]

Identifier: 74317275

GI number: 74317275

Start: 1319398

End: 1320063

Strand: Direct

Name: scpB [H]

Synonym: Tbd_1257

Alternate gene names: 74317275

Gene position: 1319398-1320063 (Clockwise)

Preceding gene: 74317274

Following gene: 74317276

Centisome position: 45.34

GC content: 67.57

Gene sequence:

>666_bases
ATGAATCTGCAGCCGAGTGACAATCCCGACGACCTCAAGGTCGTTCTCGAAGCCGCGTTGCTGGCGGCGATCGAACCGCT
GACGCCCGCGGAACTCAAGCGCATGTTCGAGCACGAGCTGTCGAACGAGACCTTGCGTCGCGCGCTCGACGAACTGCGCG
CGGCCTGGCACGGGCGCGGCGTCGAACTGATCCAGGTCGCGGACGGCTGGCGTTTCCAGACCCGCGCCGAGATGCAGCCC
TGGCTATCGCGGCTCAAGAACGAGAAGCCGCCGCGTTACTCGCGCGCCGTGCTCGAGACGCTCGCGATCATCGCGTATCG
CCAGCCGGTGACGCGCGGCGACATCGAGGACGTGCGCGGCGTCGCGGTCAACCCCAACATCATCAAGGCGCTCGAAGAGC
GGGGCTGGATCGAGGCGATCGGCCATCGCGACGTCCCGGGCCGGCCCGCGCTGTTCGGCACCACCGGCCACTTCCTCAGC
GATCTCGGCCTGCGCACGCTGTCCGAGCTCCCGCCGCTGGAGGAACTCGGCACGCTCGTGACGCCCGACGAAACCGCATT
GATTCCTGAACTGCGCGAGGAATTGCAGGACAATGACGCCGCGCCGGCATTCGGCGCAGTGATCGAAACCGCCGCGCCCG
CCGGCGCGGTCACCGAGAATATCTGA

Upstream 100 bases:

>100_bases
GAACTCGTGGTGACCTTCCTCGCCGTCCTGGAACTGAGCAAGGAGACGCTGCTCGACGTGACGCAGGCCGAACCTTTCGC
CCCCATCTACGTGAAGCTCC

Downstream 100 bases:

>100_bases
CTTCATGGCCCGACCCGCATCCCCCATCCGCCGCTCGCCTAACGCTCCCCAGGGGCGCGCGGCGAGCCGCCTGCAACAGG
CGACCGCGCCCGAGGCTGCG

Product: condensin subunit ScpB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MNLQPSDNPDDLKVVLEAALLAAIEPLTPAELKRMFEHELSNETLRRALDELRAAWHGRGVELIQVADGWRFQTRAEMQP
WLSRLKNEKPPRYSRAVLETLAIIAYRQPVTRGDIEDVRGVAVNPNIIKALEERGWIEAIGHRDVPGRPALFGTTGHFLS
DLGLRTLSELPPLEELGTLVTPDETALIPELREELQDNDAAPAFGAVIETAAPAGAVTENI

Sequences:

>Translated_221_residues
MNLQPSDNPDDLKVVLEAALLAAIEPLTPAELKRMFEHELSNETLRRALDELRAAWHGRGVELIQVADGWRFQTRAEMQP
WLSRLKNEKPPRYSRAVLETLAIIAYRQPVTRGDIEDVRGVAVNPNIIKALEERGWIEAIGHRDVPGRPALFGTTGHFLS
DLGLRTLSELPPLEELGTLVTPDETALIPELREELQDNDAAPAFGAVIETAAPAGAVTENI
>Mature_221_residues
MNLQPSDNPDDLKVVLEAALLAAIEPLTPAELKRMFEHELSNETLRRALDELRAAWHGRGVELIQVADGWRFQTRAEMQP
WLSRLKNEKPPRYSRAVLETLAIIAYRQPVTRGDIEDVRGVAVNPNIIKALEERGWIEAIGHRDVPGRPALFGTTGHFLS
DLGLRTLSELPPLEELGTLVTPDETALIPELREELQDNDAAPAFGAVIETAAPAGAVTENI

Specific function: May participate in chromosomal partitioning during cell division (Potential) [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 24444; Mature: 24444

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLQPSDNPDDLKVVLEAALLAAIEPLTPAELKRMFEHELSNETLRRALDELRAAWHGRG
CCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VELIQVADGWRFQTRAEMQPWLSRLKNEKPPRYSRAVLETLAIIAYRQPVTRGDIEDVRG
EEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCC
VAVNPNIIKALEERGWIEAIGHRDVPGRPALFGTTGHFLSDLGLRTLSELPPLEELGTLV
CCCCHHHHHHHHHCCHHHHCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCHHHHCCCC
TPDETALIPELREELQDNDAAPAFGAVIETAAPAGAVTENI
CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNLQPSDNPDDLKVVLEAALLAAIEPLTPAELKRMFEHELSNETLRRALDELRAAWHGRG
CCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VELIQVADGWRFQTRAEMQPWLSRLKNEKPPRYSRAVLETLAIIAYRQPVTRGDIEDVRG
EEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCC
VAVNPNIIKALEERGWIEAIGHRDVPGRPALFGTTGHFLSDLGLRTLSELPPLEELGTLV
CCCCHHHHHHHHHCCHHHHCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCHHHHCCCC
TPDETALIPELREELQDNDAAPAFGAVIETAAPAGAVTENI
CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]