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The map label for this gene is scpA [H]

Identifier: 74317274

GI number: 74317274

Start: 1318593

End: 1319417

Strand: Direct

Name: scpA [H]

Synonym: Tbd_1256

Alternate gene names: 74317274

Gene position: 1318593-1319417 (Clockwise)

Preceding gene: 74317270

Following gene: 74317275

Centisome position: 45.32

GC content: 65.09

Gene sequence:

>825_bases
ATGAACGAAGCCGAGCTGCTCGATCCGCCTCTCGAAACGCCGCCCCGGCCAGCGGTCAAGATACGCGGCGAGCCGCTCGC
CGAGTTGCCGCAGGATCTCTACATCCCGCCCGACGCGCTCGAGGTCTTTCTCGAAGCCTTCGAAGGTCCGCTCGACCTTC
TGCTCTACCTGATCCGCAAGCAGAACCTCGACGTCCTCGACATTCCGATGGCCGCGCTGACCCAGCAGTACATGGCCTAC
GTCGAGGCTGCGCGGGCGACCCGGCTCGAACTTGCGGCCGAATATCTACTGATGGCGGCGGTGCTGATCGACATCAAGTC
GCGCATGCTGCTGCCGCGGCGCGAGCAGGCCGACGAGCCGGGCGAGGCCGACGATCCGCGCGCGGAACTGGTGCGGCGGC
TGCTCGAATACGAGCAGATGAAGCGGGCCGGCCAGCAGCTCGACGCCTTGCCGCAGGCGGGGCGGGATTTCGATACGGTC
AGTGTTTTCCTGCCGGCCGCGGCCAAGCGGCTGCCGAGCGTGCACGCGGAAGAACTCGCCGCGGCCTGGCTTGCGATCCT
GTCGCGCGCGAAGAACCGCACCCATCACCGCATCGGCCGCCAGGAACTGTCGATCCGCGAGCACATGAGCCGCATCCTGA
AACGGCTCACGCCCGGAGAATTCATGGAATTCAAGGAGCTGTTTCCGGAAGCTTCGACGGTGCATGAACTCGTGGTGACC
TTCCTCGCCGTCCTGGAACTGAGCAAGGAGACGCTGCTCGACGTGACGCAGGCCGAACCTTTCGCCCCCATCTACGTGAA
GCTCCATGAATCTGCAGCCGAGTGA

Upstream 100 bases:

>100_bases
ATCGTTGTTCGTGTGTCCCTATACGGCTTACGGAAATTCCGTGCGTCGATGAACGCGCCCGCAGGAGGCCGACCCACCGG
CCTCGGGTAAAATGCCGCGC

Downstream 100 bases:

>100_bases
CAATCCCGACGACCTCAAGGTCGTTCTCGAAGCCGCGTTGCTGGCGGCGATCGAACCGCTGACGCCCGCGGAACTCAAGC
GCATGTTCGAGCACGAGCTG

Product: condensin subunit ScpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MNEAELLDPPLETPPRPAVKIRGEPLAELPQDLYIPPDALEVFLEAFEGPLDLLLYLIRKQNLDVLDIPMAALTQQYMAY
VEAARATRLELAAEYLLMAAVLIDIKSRMLLPRREQADEPGEADDPRAELVRRLLEYEQMKRAGQQLDALPQAGRDFDTV
SVFLPAAAKRLPSVHAEELAAAWLAILSRAKNRTHHRIGRQELSIREHMSRILKRLTPGEFMEFKELFPEASTVHELVVT
FLAVLELSKETLLDVTQAEPFAPIYVKLHESAAE

Sequences:

>Translated_274_residues
MNEAELLDPPLETPPRPAVKIRGEPLAELPQDLYIPPDALEVFLEAFEGPLDLLLYLIRKQNLDVLDIPMAALTQQYMAY
VEAARATRLELAAEYLLMAAVLIDIKSRMLLPRREQADEPGEADDPRAELVRRLLEYEQMKRAGQQLDALPQAGRDFDTV
SVFLPAAAKRLPSVHAEELAAAWLAILSRAKNRTHHRIGRQELSIREHMSRILKRLTPGEFMEFKELFPEASTVHELVVT
FLAVLELSKETLLDVTQAEPFAPIYVKLHESAAE
>Mature_274_residues
MNEAELLDPPLETPPRPAVKIRGEPLAELPQDLYIPPDALEVFLEAFEGPLDLLLYLIRKQNLDVLDIPMAALTQQYMAY
VEAARATRLELAAEYLLMAAVLIDIKSRMLLPRREQADEPGEADDPRAELVRRLLEYEQMKRAGQQLDALPQAGRDFDTV
SVFLPAAAKRLPSVHAEELAAAWLAILSRAKNRTHHRIGRQELSIREHMSRILKRLTPGEFMEFKELFPEASTVHELVVT
FLAVLELSKETLLDVTQAEPFAPIYVKLHESAAE

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 30974; Mature: 30974

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEAELLDPPLETPPRPAVKIRGEPLAELPQDLYIPPDALEVFLEAFEGPLDLLLYLIRK
CCCCCCCCCCCCCCCCCCEEECCCCHHHCCHHCCCCHHHHHHHHHHHCCHHHHHHHHHHH
QNLDVLDIPMAALTQQYMAYVEAARATRLELAAEYLLMAAVLIDIKSRMLLPRREQADEP
CCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCC
GEADDPRAELVRRLLEYEQMKRAGQQLDALPQAGRDFDTVSVFLPAAAKRLPSVHAEELA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHH
AAWLAILSRAKNRTHHRIGRQELSIREHMSRILKRLTPGEFMEFKELFPEASTVHELVVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHH
FLAVLELSKETLLDVTQAEPFAPIYVKLHESAAE
HHHHHHHHHHHHHHHHCCCCCCHHHEEECCCCCC
>Mature Secondary Structure
MNEAELLDPPLETPPRPAVKIRGEPLAELPQDLYIPPDALEVFLEAFEGPLDLLLYLIRK
CCCCCCCCCCCCCCCCCCEEECCCCHHHCCHHCCCCHHHHHHHHHHHCCHHHHHHHHHHH
QNLDVLDIPMAALTQQYMAYVEAARATRLELAAEYLLMAAVLIDIKSRMLLPRREQADEP
CCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCC
GEADDPRAELVRRLLEYEQMKRAGQQLDALPQAGRDFDTVSVFLPAAAKRLPSVHAEELA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHH
AAWLAILSRAKNRTHHRIGRQELSIREHMSRILKRLTPGEFMEFKELFPEASTVHELVVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHH
FLAVLELSKETLLDVTQAEPFAPIYVKLHESAAE
HHHHHHHHHHHHHHHHCCCCCCHHHEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]