| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317231
Identifier: 74317231
GI number: 74317231
Start: 1269067
End: 1269486
Strand: Direct
Name: 74317231
Synonym: Tbd_1213
Alternate gene names: NA
Gene position: 1269067-1269486 (Clockwise)
Preceding gene: 74317227
Following gene: 74317232
Centisome position: 43.61
GC content: 51.9
Gene sequence:
>420_bases TTGAGCGCCATGTTAGACCGTGAATATATGTTGGCTACGACAAGGCAGAGACAAGCAAAATATGCCGCGCTGTTTAAGGG GCAAGCCTGGGCAGAAAACGAATTAAGCGACGGTGGATGGCTATGCCTCATAGGTGTGCCGTGGCTACTTTACGAAATGG AAAACAATAGAAAGAGCAACGGCGAAAACAGAAATGCCGATTGCCAGCCAAGACCGGATTGCATTGGGCCGCTGGAGCCT GCGTTCCAACTCATGTTGCCCGAGCAGACGATGGCCGATACCACGTTGGTCGTTCCAACCGGCAATCCACTCGCAAAGTT CCTCGTCAGTTTTTTGGCGAAGATCGTAGGGGTCTCGTTCGTTGCTCATGTGGGGGCGAGGTCTAACGTAAAAGTGAGCG AGGGCGAGAATGGAAAATAG
Upstream 100 bases:
>100_bases GCAAAGAGCGGAACTGGCGAGCGGGCAACATGCCTTGCAGTTCTAACGTAGAGCTAACCGGCGGCGCTTTAGCGCCGTCC AGCGACCGAAGGGAGCGAGG
Downstream 100 bases:
>100_bases CAAAGCAAAAGGGGCCGCTGCCGAGCCTCTGCTCGACTGTAGGGTTAGAGGGGTGAAACGCAGGCACGGGTTTGTTTTGG TGACACCACAGCGCGAGATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MSAMLDREYMLATTRQRQAKYAALFKGQAWAENELSDGGWLCLIGVPWLLYEMENNRKSNGENRNADCQPRPDCIGPLEP AFQLMLPEQTMADTTLVVPTGNPLAKFLVSFLAKIVGVSFVAHVGARSNVKVSEGENGK
Sequences:
>Translated_139_residues MSAMLDREYMLATTRQRQAKYAALFKGQAWAENELSDGGWLCLIGVPWLLYEMENNRKSNGENRNADCQPRPDCIGPLEP AFQLMLPEQTMADTTLVVPTGNPLAKFLVSFLAKIVGVSFVAHVGARSNVKVSEGENGK >Mature_138_residues SAMLDREYMLATTRQRQAKYAALFKGQAWAENELSDGGWLCLIGVPWLLYEMENNRKSNGENRNADCQPRPDCIGPLEPA FQLMLPEQTMADTTLVVPTGNPLAKFLVSFLAKIVGVSFVAHVGARSNVKVSEGENGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15333; Mature: 15202
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAMLDREYMLATTRQRQAKYAALFKGQAWAENELSDGGWLCLIGVPWLLYEMENNRKSN CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCC GENRNADCQPRPDCIGPLEPAFQLMLPEQTMADTTLVVPTGNPLAKFLVSFLAKIVGVSF CCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH VAHVGARSNVKVSEGENGK HHHCCCCCCEEECCCCCCC >Mature Secondary Structure SAMLDREYMLATTRQRQAKYAALFKGQAWAENELSDGGWLCLIGVPWLLYEMENNRKSN CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCC GENRNADCQPRPDCIGPLEPAFQLMLPEQTMADTTLVVPTGNPLAKFLVSFLAKIVGVSF CCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH VAHVGARSNVKVSEGENGK HHHCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA