Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

Click here to switch to the map view.

The map label for this gene is 74317227

Identifier: 74317227

GI number: 74317227

Start: 1266036

End: 1266275

Strand: Direct

Name: 74317227

Synonym: Tbd_1209

Alternate gene names: NA

Gene position: 1266036-1266275 (Clockwise)

Preceding gene: 74317219

Following gene: 74317231

Centisome position: 43.51

GC content: 55.42

Gene sequence:

>240_bases
ATGAGCAACCTAGAGCCGAAAACGAAGCCTGATGGTGGAGAGTCCGCGTCGACTGCCGGGTTTGGCCGCACTGACCCACG
TCGCTTTATGGCCGTAGCAAGCAAACCGCACGCGCAACTCGCGGGGGAAATGGCCGACGAAATCAAAGCAGTGGTTTACG
CATACGAGCAGCGAATACCACTAGCCCTAGCGATTGGTGTTCTTCGCATCGTGGAAAAAGAGATTCTTGATGCGGCCTAA

Upstream 100 bases:

>100_bases
TGTTCAAAGGTTGTCATGACAGCGAGGCAGTGCGTGCAAACCTTGATGCTGTGCGGGCGCACGGATACGAGGATGCGGAC
GCCAACAAAGGAGATAGAGC

Downstream 100 bases:

>100_bases
CGTTTGAATTCACCGGCCTGCGCGGCTTTTCGCGCAGGTCCGGTGGAATGAATTGTTAGCGCTCATATGGCACCGGCTGG
AGGTCTGCGCTCTTATACAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 78

Protein sequence:

>79_residues
MSNLEPKTKPDGGESASTAGFGRTDPRRFMAVASKPHAQLAGEMADEIKAVVYAYEQRIPLALAIGVLRIVEKEILDAA

Sequences:

>Translated_79_residues
MSNLEPKTKPDGGESASTAGFGRTDPRRFMAVASKPHAQLAGEMADEIKAVVYAYEQRIPLALAIGVLRIVEKEILDAA
>Mature_78_residues
SNLEPKTKPDGGESASTAGFGRTDPRRFMAVASKPHAQLAGEMADEIKAVVYAYEQRIPLALAIGVLRIVEKEILDAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8470; Mature: 8339

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNLEPKTKPDGGESASTAGFGRTDPRRFMAVASKPHAQLAGEMADEIKAVVYAYEQRIP
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
LALAIGVLRIVEKEILDAA
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SNLEPKTKPDGGESASTAGFGRTDPRRFMAVASKPHAQLAGEMADEIKAVVYAYEQRIP
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
LALAIGVLRIVEKEILDAA
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA