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The map label for this gene is ompA [C]

Identifier: 74317189

GI number: 74317189

Start: 1223183

End: 1223755

Strand: Reverse

Name: ompA [C]

Synonym: Tbd_1171

Alternate gene names: 74317189

Gene position: 1223755-1223183 (Counterclockwise)

Preceding gene: 74317209

Following gene: 74317178

Centisome position: 42.06

GC content: 63.87

Gene sequence:

>573_bases
ATGCGCAAGCTGCTTGTCTCCGCTGCGCTGGCATCGGCCATGGCCATGTCGGCGCCGGCAACCGCCGGTTTCTTCGATTT
CACGCTCGCCCCGTACGTCGGCGCGAGTGCCGGCGAATCGACGACCGATTCCTGCATCACGGGTACCTGCGACGACGCCG
ATACCGCCTGGAAAATCTACGGCGGTCTCGAAGTCAACGAATTCATCTCGATGGAAGTCGGCTATGTCGAACTCGGCGAA
GTCGAGTACAGCGCGCCGACCGGCACCCGCGGCACCCACGGCATGATCCTGCAGCTCGTCGGTTCCTACGCGCTCGGCCC
GAAGTTCACGCTGCTCGGCCGCGGCGGCATGAACATCCTGAATACCGAAGTCGAGGGCGCGGTTGCAGGCGCGCGGGGCA
ACGAGGGCGACACCGACGTCTCGTGGTCGCTGGGTCTCGGCGCGCAATACAACCTCACCAAATCGGTCGGCCTGCGCGTC
GAATGGGAACGCTACTTCGAAGTCGGCGACCCGGACAGCACGGGCGAAGCCGATATCGATCTCCTTACCGCTGGCGTCGT
CTTCAAATTCTGA

Upstream 100 bases:

>100_bases
GGGCGAAATCCCGTAATCTGCCGAGGGCTTGCCTGCGCCGTCCGCGGTGCGGGAGCAAGCGCGTTTTCAACATCACAATA
ATTTTTGGAGGAGTGTCACT

Downstream 100 bases:

>100_bases
AACGCGTTCGGCAAATGAAAAACGGGGCCCGCGCCCCGTTTTTCATTTCTGTTCACCGTGTCGATCGGCCGAACGCTCAG
CTGACCTCGTCGATCCACGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MRKLLVSAALASAMAMSAPATAGFFDFTLAPYVGASAGESTTDSCITGTCDDADTAWKIYGGLEVNEFISMEVGYVELGE
VEYSAPTGTRGTHGMILQLVGSYALGPKFTLLGRGGMNILNTEVEGAVAGARGNEGDTDVSWSLGLGAQYNLTKSVGLRV
EWERYFEVGDPDSTGEADIDLLTAGVVFKF

Sequences:

>Translated_190_residues
MRKLLVSAALASAMAMSAPATAGFFDFTLAPYVGASAGESTTDSCITGTCDDADTAWKIYGGLEVNEFISMEVGYVELGE
VEYSAPTGTRGTHGMILQLVGSYALGPKFTLLGRGGMNILNTEVEGAVAGARGNEGDTDVSWSLGLGAQYNLTKSVGLRV
EWERYFEVGDPDSTGEADIDLLTAGVVFKF
>Mature_190_residues
MRKLLVSAALASAMAMSAPATAGFFDFTLAPYVGASAGESTTDSCITGTCDDADTAWKIYGGLEVNEFISMEVGYVELGE
VEYSAPTGTRGTHGMILQLVGSYALGPKFTLLGRGGMNILNTEVEGAVAGARGNEGDTDVSWSLGLGAQYNLTKSVGLRV
EWERYFEVGDPDSTGEADIDLLTAGVVFKF

Specific function: Required For The Action Of Colicins K And L And For The Stabilization Of Mating Aggregates In Conjugation. Serves As A Receptor For A Number Of T-Even Like Phages. Also Acts As A Porin With Low Permeability That Allows Slow Penetration Of Small Solutes.

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Integral Membrane Protein. Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 3380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1480 Molecules/Cell In: Growth Phase, Mi

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19920; Mature: 19920

Theoretical pI: Translated: 4.00; Mature: 4.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLLVSAALASAMAMSAPATAGFFDFTLAPYVGASAGESTTDSCITGTCDDADTAWKIY
CCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCEEEEE
GGLEVNEFISMEVGYVELGEVEYSAPTGTRGTHGMILQLVGSYALGPKFTLLGRGGMNIL
CCCCHHHEEEEEECEEEECCEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCEEE
NTEVEGAVAGARGNEGDTDVSWSLGLGAQYNLTKSVGLRVEWERYFEVGDPDSTGEADID
ECCCCCEEECCCCCCCCCCEEEEECCCCEECCHHCCCCEEEEHEEEECCCCCCCCCCCEE
LLTAGVVFKF
EEEEEEEEEC
>Mature Secondary Structure
MRKLLVSAALASAMAMSAPATAGFFDFTLAPYVGASAGESTTDSCITGTCDDADTAWKIY
CCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCEEEEE
GGLEVNEFISMEVGYVELGEVEYSAPTGTRGTHGMILQLVGSYALGPKFTLLGRGGMNIL
CCCCHHHEEEEEECEEEECCEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCEEE
NTEVEGAVAGARGNEGDTDVSWSLGLGAQYNLTKSVGLRVEWERYFEVGDPDSTGEADID
ECCCCCEEECCCCCCCCCCEEEEECCCCEECCHHCCCCEEEEHEEEECCCCCCCCCCCEE
LLTAGVVFKF
EEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA