| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is suhB [H]
Identifier: 74317178
GI number: 74317178
Start: 1214967
End: 1215773
Strand: Reverse
Name: suhB [H]
Synonym: Tbd_1160
Alternate gene names: 74317178
Gene position: 1215773-1214967 (Counterclockwise)
Preceding gene: 74317189
Following gene: 74317177
Centisome position: 41.78
GC content: 63.32
Gene sequence:
>807_bases ATGCATCCCATGCTCAATACGGCGGTGAAAGCCGCACGCAAGGCGGGGGCGATCATCAATCGCGCCTCGCTCGACCTCGA CCAACTCACCGTACGGAGCAAGCAGGACCGCGATTACGTCAGCGAAGTCGACCAGATGGCCGAACGCGCCATCATCGAAA CGCTGCTCGACGCCTATCCGAACCACGGGATTCTAGCAGAGGAGTCTGGCAGCACCGACGCCAAGAACGGCGAAGACTAC CAGTGGATCATCGATCCGCTCGACGGCACGACCAACTTCCTGCATGGCCTGCCGCAGTATTCCGTGTCGATCGCGCTGAA GCACAAGGGCCAGATCACCCAGGCCGTCGTGTTCGATCCCTCGCGCAACGAACTCTTCACCGCGAGCCGCGGCCGCGGTG CGATGCTCAACGACCGGCGGATCCGTGCGAGCAAGCGCAGCAAACTCTCCGAGTGCCTGATCGGCACCGGCTTTCCCTAC TGCGAGTTCAGCTACGCCGAGGCCTACATCAACATGTTCCGCGAGATGATGCGCGCGACCTCCGGGTTGCGTCGGCCCGG TTCGGCCGCACTTGATCTTGCCTACGTCGCCTGCGGCCGTTACGACGGGTTCTGGGAAATCCGTCTCAAGCCCTGGGATC TCGCGGCCGGCAGCCTGATCGCCCAGGAATCGGGCGCGCTCGTCGGCAACCTGGTCGGTGACGAAGGCTTCCTCGAGTCC GGCAATATCGTCGCCGCGAGCCCGAAAGTCTTCGCGCAGATGCTGCAACTGATCGCGCCGCATCTGCCGCCCGAACTCAA GGTCTGA
Upstream 100 bases:
>100_bases TGCGCGCGAGCACCACGCGAATGTCGGCGAGAAGTTTAGGATCGCTCGATGTCATCAAGTAAAATGGCGCGCTCGTTCTT TGAATCCATTGCCAGACATC
Downstream 100 bases:
>100_bases ATTCGCGTCTCCCCATGTCGATCGCGCCCGCGGCCCACACGCCGATGATGCAGCAGTATCTCGGCATCAAGGCACAGCAT CCCGACATGCTGCTGTTCTA
Product: inositol monophosphatase
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MHPMLNTAVKAARKAGAIINRASLDLDQLTVRSKQDRDYVSEVDQMAERAIIETLLDAYPNHGILAEESGSTDAKNGEDY QWIIDPLDGTTNFLHGLPQYSVSIALKHKGQITQAVVFDPSRNELFTASRGRGAMLNDRRIRASKRSKLSECLIGTGFPY CEFSYAEAYINMFREMMRATSGLRRPGSAALDLAYVACGRYDGFWEIRLKPWDLAAGSLIAQESGALVGNLVGDEGFLES GNIVAASPKVFAQMLQLIAPHLPPELKV
Sequences:
>Translated_268_residues MHPMLNTAVKAARKAGAIINRASLDLDQLTVRSKQDRDYVSEVDQMAERAIIETLLDAYPNHGILAEESGSTDAKNGEDY QWIIDPLDGTTNFLHGLPQYSVSIALKHKGQITQAVVFDPSRNELFTASRGRGAMLNDRRIRASKRSKLSECLIGTGFPY CEFSYAEAYINMFREMMRATSGLRRPGSAALDLAYVACGRYDGFWEIRLKPWDLAAGSLIAQESGALVGNLVGDEGFLES GNIVAASPKVFAQMLQLIAPHLPPELKV >Mature_268_residues MHPMLNTAVKAARKAGAIINRASLDLDQLTVRSKQDRDYVSEVDQMAERAIIETLLDAYPNHGILAEESGSTDAKNGEDY QWIIDPLDGTTNFLHGLPQYSVSIALKHKGQITQAVVFDPSRNELFTASRGRGAMLNDRRIRASKRSKLSECLIGTGFPY CEFSYAEAYINMFREMMRATSGLRRPGSAALDLAYVACGRYDGFWEIRLKPWDLAAGSLIAQESGALVGNLVGDEGFLES GNIVAASPKVFAQMLQLIAPHLPPELKV
Specific function: Unknown
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI7657236, Length=262, Percent_Identity=33.587786259542, Blast_Score=142, Evalue=3e-34, Organism=Homo sapiens, GI5031789, Length=253, Percent_Identity=29.2490118577075, Blast_Score=132, Evalue=3e-31, Organism=Homo sapiens, GI221625487, Length=255, Percent_Identity=29.0196078431373, Blast_Score=132, Evalue=5e-31, Organism=Homo sapiens, GI221625507, Length=144, Percent_Identity=32.6388888888889, Blast_Score=94, Evalue=1e-19, Organism=Escherichia coli, GI1788882, Length=267, Percent_Identity=48.689138576779, Blast_Score=266, Evalue=1e-72, Organism=Escherichia coli, GI1790659, Length=132, Percent_Identity=31.0606060606061, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI193202570, Length=271, Percent_Identity=31.3653136531365, Blast_Score=135, Evalue=3e-32, Organism=Caenorhabditis elegans, GI193202572, Length=238, Percent_Identity=33.6134453781513, Blast_Score=134, Evalue=4e-32, Organism=Saccharomyces cerevisiae, GI6320493, Length=210, Percent_Identity=38.5714285714286, Blast_Score=130, Evalue=3e-31, Organism=Saccharomyces cerevisiae, GI6321836, Length=233, Percent_Identity=28.755364806867, Blast_Score=94, Evalue=2e-20, Organism=Drosophila melanogaster, GI21357329, Length=264, Percent_Identity=31.8181818181818, Blast_Score=135, Evalue=2e-32, Organism=Drosophila melanogaster, GI24664922, Length=231, Percent_Identity=33.3333333333333, Blast_Score=134, Evalue=7e-32, Organism=Drosophila melanogaster, GI21357303, Length=250, Percent_Identity=33.2, Blast_Score=130, Evalue=6e-31, Organism=Drosophila melanogaster, GI24664926, Length=226, Percent_Identity=31.4159292035398, Blast_Score=121, Evalue=6e-28, Organism=Drosophila melanogaster, GI24664918, Length=203, Percent_Identity=33.0049261083744, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI21357957, Length=239, Percent_Identity=30.5439330543933, Blast_Score=104, Evalue=5e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 - InterPro: IPR022337 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.25 [H]
Molecular weight: Translated: 29466; Mature: 29466
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: PS00629 IMP_1 ; PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPMLNTAVKAARKAGAIINRASLDLDQLTVRSKQDRDYVSEVDQMAERAIIETLLDAYP CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC NHGILAEESGSTDAKNGEDYQWIIDPLDGTTNFLHGLPQYSVSIALKHKGQITQAVVFDP CCCEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHCCCCCEEEEEEECCCCEEEEEEECC SRNELFTASRGRGAMLNDRRIRASKRSKLSECLIGTGFPYCEFSYAEAYINMFREMMRAT CCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH SGLRRPGSAALDLAYVACGRYDGFWEIRLKPWDLAAGSLIAQESGALVGNLVGDEGFLES HCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHCCCCEEEEECCCCCCCCC GNIVAASPKVFAQMLQLIAPHLPPELKV CCEEEECHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MHPMLNTAVKAARKAGAIINRASLDLDQLTVRSKQDRDYVSEVDQMAERAIIETLLDAYP CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC NHGILAEESGSTDAKNGEDYQWIIDPLDGTTNFLHGLPQYSVSIALKHKGQITQAVVFDP CCCEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHCCCCCEEEEEEECCCCEEEEEEECC SRNELFTASRGRGAMLNDRRIRASKRSKLSECLIGTGFPYCEFSYAEAYINMFREMMRAT CCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH SGLRRPGSAALDLAYVACGRYDGFWEIRLKPWDLAAGSLIAQESGALVGNLVGDEGFLES HCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHCCCCEEEEECCCCCCCCC GNIVAASPKVFAQMLQLIAPHLPPELKV CCEEEECHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10761919 [H]