Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is yiiP [C]

Identifier: 74317132

GI number: 74317132

Start: 1171040

End: 1171957

Strand: Reverse

Name: yiiP [C]

Synonym: Tbd_1114

Alternate gene names: 74317132

Gene position: 1171957-1171040 (Counterclockwise)

Preceding gene: 74317134

Following gene: 74317129

Centisome position: 40.28

GC content: 67.32

Gene sequence:

>918_bases
ATGCACGCCTCCCTCAAACGCTATGCCTGGCTTTCGATCGCCGCCGCGGTGGCCACGATCCTCCTCAAGGGCTCGGCATG
GTGGCTCACGGGATCGGTCGGCCTGCTCTCGGACGCCCTCGAATCCTTCGTCAACCTCGCCGGCGCGATGATGGCGCTGG
CGATGCTTTCGCTCGCGGCGCAGCCGGCCGACGACAACCACGCGCATGGCCACGGCAAGGCCGAATATTTCTCGAGCGCG
TTCGAAGGTTTCCTGATTCTCGTCGCCGCCATGAGCATCGGCTACGCCGCGGTCGAGCGCCTGCTGAATCCGCAGCCGCT
CGAGACGGTCGGAATCGGACTCGCGATCTCGGTCATCGCGTCGATCATCAATCTCGTCACCTCGCGCGTCCTCTTGGGCG
TCGGCCGCAAATACAAGTCGATCACGCTCGAGGCGGACGCGCACCACCTGCTGACCGACGTCTGGACGTCGGCGGGGGTA
ATCGCCGGCGTCGCGCTCGTCTGGTTCACTGGCTGGCTGTGGCTGGACCCGGTCATCGCGCTGCTCGTCGCCTTGAACAT
CGTCTGGACCGGATGGCAGTTGCTGCAGCGCTCGGCCTCCGGACTCATGGACGTCTCGCTACCCGAGGCCGACCTGCGCG
CCATCGAAACCATCCTCGATGGCTACCGCCGCCACGGCCTGGACTTTCACGCGCTGCGCACGCGCCAGGCCGGTGCCCGC
GCCTTCGTCAGTGTGCATCTGCTGGTGCCGGGAGCGTGGACCGTCCAGCAGGGCCACGACTGGTCGGAGCGCGTGGAGTC
CGACATCCGGCGCGCGGTCAGCCAGGTCCACATCACGACCCATCTCGAGCCCCTCGAGGATCCGCTGTCGCTGGCCGACT
CCGGCCTCGACCGCCACGACGAGGGAAGGCGGGAATGA

Upstream 100 bases:

>100_bases
CAAGGTCGTGACGCGCTAGCGTAGCGCAAGTCGCCCGTAGCCGCGCGGGACGGCCGCGGCCGCGCGATACAATGCCCCTC
CCGCTCCGCAGACCCCGCAC

Downstream 100 bases:

>100_bases
ACGCGACGGCGCACGCCCAGGGACAGCCCCCGCCCTAGCCTCGCGTTTTTCGCCGCCACGCCGACCATGCCAGGAGATAG
GCGGCGAGGTTGACGACGAC

Product: cation efflux protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MHASLKRYAWLSIAAAVATILLKGSAWWLTGSVGLLSDALESFVNLAGAMMALAMLSLAAQPADDNHAHGHGKAEYFSSA
FEGFLILVAAMSIGYAAVERLLNPQPLETVGIGLAISVIASIINLVTSRVLLGVGRKYKSITLEADAHHLLTDVWTSAGV
IAGVALVWFTGWLWLDPVIALLVALNIVWTGWQLLQRSASGLMDVSLPEADLRAIETILDGYRRHGLDFHALRTRQAGAR
AFVSVHLLVPGAWTVQQGHDWSERVESDIRRAVSQVHITTHLEPLEDPLSLADSGLDRHDEGRRE

Sequences:

>Translated_305_residues
MHASLKRYAWLSIAAAVATILLKGSAWWLTGSVGLLSDALESFVNLAGAMMALAMLSLAAQPADDNHAHGHGKAEYFSSA
FEGFLILVAAMSIGYAAVERLLNPQPLETVGIGLAISVIASIINLVTSRVLLGVGRKYKSITLEADAHHLLTDVWTSAGV
IAGVALVWFTGWLWLDPVIALLVALNIVWTGWQLLQRSASGLMDVSLPEADLRAIETILDGYRRHGLDFHALRTRQAGAR
AFVSVHLLVPGAWTVQQGHDWSERVESDIRRAVSQVHITTHLEPLEDPLSLADSGLDRHDEGRRE
>Mature_305_residues
MHASLKRYAWLSIAAAVATILLKGSAWWLTGSVGLLSDALESFVNLAGAMMALAMLSLAAQPADDNHAHGHGKAEYFSSA
FEGFLILVAAMSIGYAAVERLLNPQPLETVGIGLAISVIASIINLVTSRVLLGVGRKYKSITLEADAHHLLTDVWTSAGV
IAGVALVWFTGWLWLDPVIALLVALNIVWTGWQLLQRSASGLMDVSLPEADLRAIETILDGYRRHGLDFHALRTRQAGAR
AFVSVHLLVPGAWTVQQGHDWSERVESDIRRAVSQVHITTHLEPLEDPLSLADSGLDRHDEGRRE

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

Organism=Escherichia coli, GI1790349, Length=286, Percent_Identity=28.3216783216783, Blast_Score=133, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 33083; Mature: 33083

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHASLKRYAWLSIAAAVATILLKGSAWWLTGSVGLLSDALESFVNLAGAMMALAMLSLAA
CCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QPADDNHAHGHGKAEYFSSAFEGFLILVAAMSIGYAAVERLLNPQPLETVGIGLAISVIA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
SIINLVTSRVLLGVGRKYKSITLEADAHHLLTDVWTSAGVIAGVALVWFTGWLWLDPVIA
HHHHHHHHHHHHHCCCCHHEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLVALNIVWTGWQLLQRSASGLMDVSLPEADLRAIETILDGYRRHGLDFHALRTRQAGAR
HHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHH
AFVSVHLLVPGAWTVQQGHDWSERVESDIRRAVSQVHITTHLEPLEDPLSLADSGLDRHD
HHEEEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC
EGRRE
CCCCC
>Mature Secondary Structure
MHASLKRYAWLSIAAAVATILLKGSAWWLTGSVGLLSDALESFVNLAGAMMALAMLSLAA
CCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QPADDNHAHGHGKAEYFSSAFEGFLILVAAMSIGYAAVERLLNPQPLETVGIGLAISVIA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
SIINLVTSRVLLGVGRKYKSITLEADAHHLLTDVWTSAGVIAGVALVWFTGWLWLDPVIA
HHHHHHHHHHHHHCCCCHHEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLVALNIVWTGWQLLQRSASGLMDVSLPEADLRAIETILDGYRRHGLDFHALRTRQAGAR
HHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHH
AFVSVHLLVPGAWTVQQGHDWSERVESDIRRAVSQVHITTHLEPLEDPLSLADSGLDRHD
HHEEEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC
EGRRE
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]