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The map label for this gene is selD [H]

Identifier: 74317039

GI number: 74317039

Start: 1088936

End: 1090003

Strand: Reverse

Name: selD [H]

Synonym: Tbd_1021

Alternate gene names: 74317039

Gene position: 1090003-1088936 (Counterclockwise)

Preceding gene: 74317041

Following gene: 74317038

Centisome position: 37.46

GC content: 69.1

Gene sequence:

>1068_bases
ATGAACGACACCACCGCTCTTCCGATCCGTCTCACCCAGTTCTCGCACGGCGGCGGCTGCGGCTGCAAGATCGCCCCGGC
CGTGCTGCGCGACATCCTCGCCGACACACCCTTCTCCTCGCACGTGGCGGCCGCCTACCCCGATCTGCTCGTCGGGATCG
AGCACGGCGACGACGCGGCGGTCTACAAGCTCAACGACGAGCAGGCGATCGTCGCGACGACCGACTTCTTCATGCCCATC
GTCGACGACCCCTTCGAGTTCGGACGGATCGCCGCGACCAACGCGCTCTCCGACGTCTACGCCATGGGCGGGCGGCCGCT
TTTTGCGCTCGCGATCGTCGGCATGCCGATCGGCAGGCTGCCGAACGAGGTGATCCGGCAGATTCTCGCCGGCGGCGAAG
CGGTCTGCAAAGCCGCAGGCGTGCCGATCGCCGGCGGCCACTCGATCGACGCACCGGAGCCGATCTATGGTCTGGTGGGC
ATCGGCGTAGTGAACCCGCGCAGGGTCAAGCAGAACGCGGGCGGCCGCGCGGGCGACAGCCTGGTCCTCGGCAAGCCGCT
TGGCGTCGGTGTCTACAGCGCGGCGCTGAAAAAAGGCCTGCTGAGCGACGCCCAGTATGCGGCAATGATCGCCGCGACGA
CGCAGCTGAATACCCCGGGCGGCGAACTCGCGGACGCCGCCGGCGTTCATGCGATGACCGACATCACGGGCTTCGGCCTG
CTCGGCCATCTGCTCGAGATCACGCGGGCGTCGGGGTTGTCGGCCGAGGTCGAACTCGGTCGTCTGCCGCTGTTGCCGGG
CGTCGGCGAGCTGGCGCAAGGTGGCCACGTCACAGGCGCGAGCGCACGCAACTGGGCGAGCTACGGCGGCGAAGTCGTGT
TGCCCGACGCCATGCCCGAGTGGCAACGCGCATTGCTCACCGACCCGCAGACGAGCGGCGGACTGCTCGTGAGCTGCGAT
CCCGCTGCGCGCGACACCGTGCTCGATATCTTTCATCGCCACGGCTTCGCGGACGCTGCGGAAATCGGCCGCCTCGGCGC
CGGCAGCCGGGTCACGGTCCGCCCCTAG

Upstream 100 bases:

>100_bases
AGTTGATCGGCGCGGTAGCCGCTGATAGGTCGAGTTGCGTTCATGTTGTATAAAACACTTTAGCCCATGCGTGCGGCGCC
CACTTCTCACAGACCCGAAC

Downstream 100 bases:

>100_bases
TGGCCTTCGCCTTCCAGGACTATCCCGCCGCCCACGACGACGTGCGCGGCGAGGTCCTCGCGGGACTTGCCGCGCATCCG
AAGGCAATTCCGCCGAAATA

Product: selenophosphate synthetase

Products: NA

Alternate protein names: Selenium donor protein; Selenophosphate synthase [H]

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MNDTTALPIRLTQFSHGGGCGCKIAPAVLRDILADTPFSSHVAAAYPDLLVGIEHGDDAAVYKLNDEQAIVATTDFFMPI
VDDPFEFGRIAATNALSDVYAMGGRPLFALAIVGMPIGRLPNEVIRQILAGGEAVCKAAGVPIAGGHSIDAPEPIYGLVG
IGVVNPRRVKQNAGGRAGDSLVLGKPLGVGVYSAALKKGLLSDAQYAAMIAATTQLNTPGGELADAAGVHAMTDITGFGL
LGHLLEITRASGLSAEVELGRLPLLPGVGELAQGGHVTGASARNWASYGGEVVLPDAMPEWQRALLTDPQTSGGLLVSCD
PAARDTVLDIFHRHGFADAAEIGRLGAGSRVTVRP

Sequences:

>Translated_355_residues
MNDTTALPIRLTQFSHGGGCGCKIAPAVLRDILADTPFSSHVAAAYPDLLVGIEHGDDAAVYKLNDEQAIVATTDFFMPI
VDDPFEFGRIAATNALSDVYAMGGRPLFALAIVGMPIGRLPNEVIRQILAGGEAVCKAAGVPIAGGHSIDAPEPIYGLVG
IGVVNPRRVKQNAGGRAGDSLVLGKPLGVGVYSAALKKGLLSDAQYAAMIAATTQLNTPGGELADAAGVHAMTDITGFGL
LGHLLEITRASGLSAEVELGRLPLLPGVGELAQGGHVTGASARNWASYGGEVVLPDAMPEWQRALLTDPQTSGGLLVSCD
PAARDTVLDIFHRHGFADAAEIGRLGAGSRVTVRP
>Mature_355_residues
MNDTTALPIRLTQFSHGGGCGCKIAPAVLRDILADTPFSSHVAAAYPDLLVGIEHGDDAAVYKLNDEQAIVATTDFFMPI
VDDPFEFGRIAATNALSDVYAMGGRPLFALAIVGMPIGRLPNEVIRQILAGGEAVCKAAGVPIAGGHSIDAPEPIYGLVG
IGVVNPRRVKQNAGGRAGDSLVLGKPLGVGVYSAALKKGLLSDAQYAAMIAATTQLNTPGGELADAAGVHAMTDITGFGL
LGHLLEITRASGLSAEVELGRLPLLPGVGELAQGGHVTGASARNWASYGGEVVLPDAMPEWQRALLTDPQTSGGLLVSCD
PAARDTVLDIFHRHGFADAAEIGRLGAGSRVTVRP

Specific function: Synthesizes selenophosphate from selenide and ATP [H]

COG id: COG0709

COG function: function code E; Selenophosphate synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the selenophosphate synthase 1 family. Class I subfamily [H]

Homologues:

Organism=Homo sapiens, GI24797148, Length=339, Percent_Identity=29.4985250737463, Blast_Score=112, Evalue=5e-25,
Organism=Homo sapiens, GI15011844, Length=357, Percent_Identity=27.4509803921569, Blast_Score=92, Evalue=6e-19,
Organism=Escherichia coli, GI1788062, Length=319, Percent_Identity=51.7241379310345, Blast_Score=320, Evalue=1e-88,
Organism=Caenorhabditis elegans, GI17543426, Length=331, Percent_Identity=26.5861027190332, Blast_Score=111, Evalue=7e-25,
Organism=Drosophila melanogaster, GI24653602, Length=292, Percent_Identity=30.4794520547945, Blast_Score=103, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24653604, Length=292, Percent_Identity=30.4794520547945, Blast_Score=103, Evalue=1e-22,
Organism=Drosophila melanogaster, GI28574119, Length=324, Percent_Identity=29.320987654321, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI28574118, Length=260, Percent_Identity=31.5384615384615, Blast_Score=91, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR016188
- InterPro:   IPR004536
- InterPro:   IPR023061 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: =2.7.9.3 [H]

Molecular weight: Translated: 36521; Mature: 36521

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDTTALPIRLTQFSHGGGCGCKIAPAVLRDILADTPFSSHVAAAYPDLLVGIEHGDDAA
CCCCEEEEEEEEEECCCCCCCCEEHHHHHHHHHHCCCCCCCHHHHCCCEEEEEECCCCEE
VYKLNDEQAIVATTDFFMPIVDDPFEFGRIAATNALSDVYAMGGRPLFALAIVGMPIGRL
EEEECCCCEEEEEECEECCCCCCCHHHCHHHHHHHHHHHHHCCCCHHEEHHHHCCCCCCC
PNEVIRQILAGGEAVCKAAGVPIAGGHSIDAPEPIYGLVGIGVVNPRRVKQNAGGRAGDS
CHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHCCCCCCCCC
LVLGKPLGVGVYSAALKKGLLSDAQYAAMIAATTQLNTPGGELADAAGVHAMTDITGFGL
EEECCCCCCHHHHHHHHHHHHCCHHHHEEEEEEEECCCCCCHHHHHCCCHHHHHHHHHHH
LGHLLEITRASGLSAEVELGRLPLLPGVGELAQGGHVTGASARNWASYGGEVVLPDAMPE
HHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHCCCEECCCCCCCHHHCCCCEEECCCCCH
WQRALLTDPQTSGGLLVSCDPAARDTVLDIFHRHGFADAAEIGRLGAGSRVTVRP
HHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEECC
>Mature Secondary Structure
MNDTTALPIRLTQFSHGGGCGCKIAPAVLRDILADTPFSSHVAAAYPDLLVGIEHGDDAA
CCCCEEEEEEEEEECCCCCCCCEEHHHHHHHHHHCCCCCCCHHHHCCCEEEEEECCCCEE
VYKLNDEQAIVATTDFFMPIVDDPFEFGRIAATNALSDVYAMGGRPLFALAIVGMPIGRL
EEEECCCCEEEEEECEECCCCCCCHHHCHHHHHHHHHHHHHCCCCHHEEHHHHCCCCCCC
PNEVIRQILAGGEAVCKAAGVPIAGGHSIDAPEPIYGLVGIGVVNPRRVKQNAGGRAGDS
CHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHCCCCCCCCC
LVLGKPLGVGVYSAALKKGLLSDAQYAAMIAATTQLNTPGGELADAAGVHAMTDITGFGL
EEECCCCCCHHHHHHHHHHHHCCHHHHEEEEEEEECCCCCCHHHHHCCCHHHHHHHHHHH
LGHLLEITRASGLSAEVELGRLPLLPGVGELAQGGHVTGASARNWASYGGEVVLPDAMPE
HHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHCCCEECCCCCCCHHHCCCCEEECCCCCH
WQRALLTDPQTSGGLLVSCDPAARDTVLDIFHRHGFADAAEIGRLGAGSRVTVRP
HHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11826967 [H]