| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is fbpB2 [H]
Identifier: 74317007
GI number: 74317007
Start: 1054602
End: 1056191
Strand: Reverse
Name: fbpB2 [H]
Synonym: Tbd_0989
Alternate gene names: 74317007
Gene position: 1056191-1054602 (Counterclockwise)
Preceding gene: 74317008
Following gene: 74317006
Centisome position: 36.3
GC content: 67.86
Gene sequence:
>1590_bases ATGCTGTTCGCGCTTACCGTCGCGGCGCTGGTGCTGATTCCGGTCGCCGTCACGTTCTCCTCGTTCGCCGAGGTCGAAGG CGACATCCTTGCCCACCTGACCGAGTTCGTGCTGCCCGATCTGGTCGGCAACACCGTGTGGCTGATGTTCGGCGTCGGCG TCGGCGTGAGCGTCCTCGGCGTGTCGCTCGCCTGGCTCACCGCAATGTGCGAATTCCCGGGCCGCCGCGTGTTCGACTGG GCCCTCCTGCTGCCGCTCGCCTTGCCGGCCTACGTCACGGCCTTCGTCGCGATCGGGCTGCTCGATTTCACCGGGCCGCT GCAGACCTGGCTGCGCGATACCTGGAACCTTACCGGCCTGCCGGAAATCCGCTCGCGCGGCGGCGTCATTCTCGTGATGT CGCTCGCGCTCTATCCCTACGTCTACCTGATCGCGCGGAATGCCTTCGCGACCCAAGGCGCGATCGCGCTCGAAGCGGCG CAGTCGCTCGGCTTGTCGCGCACGCGCGGTTTCTTTCGTGTCGCGCTGCCGATGGCGCGCCCGTGGATCGCGGCCGGCAT GATGCTCGCGCTCATGGAAACGCTCGCCGACTTCGGCACCATGGCGATCTTCAACTACGACACCTTCACCACCGCGATCT ACAAGGCGTGGTACAGCCTGTTTTCGCTCTCGGCCGCAGCGCAGCTGGCATCGATCCTGATTCTTTTCGTGCTGGTCGCC GTCGTGTTCGAACAGCGTTCACGCGCGCGCATGCGCTACGGCGCGGTCGGACGCGGCGCCGCGTCACGCCGCATCCGGCT CTCGCCGCTGCTCGCCACGCTCGCCTTCGCCTACGCGGGCATCGTGCTCGCGATCGCCTTCGTGATTCCGGTGACGCAGC TGGCGCTGTGGACGCGCGACGTCGTCGCCAGCGATCTCGACAACCGCTACTGGGGCTTCGCCTGGCATTCGGTGCTGCTG TCGGGAATCGGTGCGGCGATGGTCGTCACGATCGCGCTGCTGCTCGCCTACGCCGGGCGGCAGCGGCCGGGCTCGGGCAT GGCCTGGCTGCAGCGCCTCGCGACCCTGGGCTACGCCTTCCCGGGCGCGGTCCTAGCGGTCGGCCTTTTCATCCCCGTCG CCTGGCTCGACAACCAGATCATCGAGGCCGGCCACGCCTGGTTCGGTTTCGAAGGCTCGGAGATCCTCAAGGGCACGCTC GTCGTCATGCTGCTCGCCTACCTCGTGCGCTTTCTCGCCGTCGGCTTCGGCCCCGTCGACAGCGGCCTGCATCGCATCAC GCGCAACGTCGACGAGGCCGCGCGCAACCTCGGCACCGGCACGGCCGGCCTGCTCGCGCGCGTCCATCTGCCGATGCTGC GCGCAAGCCTGCTGACCGCGGCAGCGCTCGCCTTCGTCGACATCATGAAAGAAATGCCGATCACGCTCATGACGCGGCCC TTCGGCTGGGACACGCTTGCGGTACGCGTGTTCGAGATGACCTCGGAGGGCGAATGGGAGCGCGCGGCGCTGCCGTCGCT GGCGATCGTCATCGCCGGTATCATCCCGGTTATTCTCCTGACCTGGCGCGGAACGCGCGCGCACGGCTAA
Upstream 100 bases:
>100_bases AAATAAACACACCTTGTCCGAAACCGCTGCAGCACCTGCAAAAACGCCCCCCGCGGGCGTTTTTGTTTTCCCTGCGTCCC GCCGGCGGGCAAGCGGCTGG
Downstream 100 bases:
>100_bases GCCCCATGGCTGAACTGATCCTCGACTCGGTCTCGCAGTCGTATGCCGCCCGGCAAATCATCGCGGACCTCACTTTCACC CTGCCCGAAGGTTCGATCGG
Product: iron transport system permease
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: Iron(III)-transport system permease protein fbpB 2 [H]
Number of amino acids: Translated: 529; Mature: 529
Protein sequence:
>529_residues MLFALTVAALVLIPVAVTFSSFAEVEGDILAHLTEFVLPDLVGNTVWLMFGVGVGVSVLGVSLAWLTAMCEFPGRRVFDW ALLLPLALPAYVTAFVAIGLLDFTGPLQTWLRDTWNLTGLPEIRSRGGVILVMSLALYPYVYLIARNAFATQGAIALEAA QSLGLSRTRGFFRVALPMARPWIAAGMMLALMETLADFGTMAIFNYDTFTTAIYKAWYSLFSLSAAAQLASILILFVLVA VVFEQRSRARMRYGAVGRGAASRRIRLSPLLATLAFAYAGIVLAIAFVIPVTQLALWTRDVVASDLDNRYWGFAWHSVLL SGIGAAMVVTIALLLAYAGRQRPGSGMAWLQRLATLGYAFPGAVLAVGLFIPVAWLDNQIIEAGHAWFGFEGSEILKGTL VVMLLAYLVRFLAVGFGPVDSGLHRITRNVDEAARNLGTGTAGLLARVHLPMLRASLLTAAALAFVDIMKEMPITLMTRP FGWDTLAVRVFEMTSEGEWERAALPSLAIVIAGIIPVILLTWRGTRAHG
Sequences:
>Translated_529_residues MLFALTVAALVLIPVAVTFSSFAEVEGDILAHLTEFVLPDLVGNTVWLMFGVGVGVSVLGVSLAWLTAMCEFPGRRVFDW ALLLPLALPAYVTAFVAIGLLDFTGPLQTWLRDTWNLTGLPEIRSRGGVILVMSLALYPYVYLIARNAFATQGAIALEAA QSLGLSRTRGFFRVALPMARPWIAAGMMLALMETLADFGTMAIFNYDTFTTAIYKAWYSLFSLSAAAQLASILILFVLVA VVFEQRSRARMRYGAVGRGAASRRIRLSPLLATLAFAYAGIVLAIAFVIPVTQLALWTRDVVASDLDNRYWGFAWHSVLL SGIGAAMVVTIALLLAYAGRQRPGSGMAWLQRLATLGYAFPGAVLAVGLFIPVAWLDNQIIEAGHAWFGFEGSEILKGTL VVMLLAYLVRFLAVGFGPVDSGLHRITRNVDEAARNLGTGTAGLLARVHLPMLRASLLTAAALAFVDIMKEMPITLMTRP FGWDTLAVRVFEMTSEGEWERAALPSLAIVIAGIIPVILLTWRGTRAHG >Mature_529_residues MLFALTVAALVLIPVAVTFSSFAEVEGDILAHLTEFVLPDLVGNTVWLMFGVGVGVSVLGVSLAWLTAMCEFPGRRVFDW ALLLPLALPAYVTAFVAIGLLDFTGPLQTWLRDTWNLTGLPEIRSRGGVILVMSLALYPYVYLIARNAFATQGAIALEAA QSLGLSRTRGFFRVALPMARPWIAAGMMLALMETLADFGTMAIFNYDTFTTAIYKAWYSLFSLSAAAQLASILILFVLVA VVFEQRSRARMRYGAVGRGAASRRIRLSPLLATLAFAYAGIVLAIAFVIPVTQLALWTRDVVASDLDNRYWGFAWHSVLL SGIGAAMVVTIALLLAYAGRQRPGSGMAWLQRLATLGYAFPGAVLAVGLFIPVAWLDNQIIEAGHAWFGFEGSEILKGTL VVMLLAYLVRFLAVGFGPVDSGLHRITRNVDEAARNLGTGTAGLLARVHLPMLRASLLTAAALAFVDIMKEMPITLMTRP FGWDTLAVRVFEMTSEGEWERAALPSLAIVIAGIIPVILLTWRGTRAHG
Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1178
COG function: function code P; ABC-type Fe3+ transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transmembrane type-1 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 57288; Mature: 57288
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFALTVAALVLIPVAVTFSSFAEVEGDILAHLTEFVLPDLVGNTVWLMFGVGVGVSVLG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH VSLAWLTAMCEFPGRRVFDWALLLPLALPAYVTAFVAIGLLDFTGPLQTWLRDTWNLTGL HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC PEIRSRGGVILVMSLALYPYVYLIARNAFATQGAIALEAAQSLGLSRTRGFFRVALPMAR HHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHCCHHEEHHHHHC PWIAAGMMLALMETLADFGTMAIFNYDTFTTAIYKAWYSLFSLSAAAQLASILILFVLVA HHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVFEQRSRARMRYGAVGRGAASRRIRLSPLLATLAFAYAGIVLAIAFVIPVTQLALWTRD HHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVASDLDNRYWGFAWHSVLLSGIGAAMVVTIALLLAYAGRQRPGSGMAWLQRLATLGYAF HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC PGAVLAVGLFIPVAWLDNQIIEAGHAWFGFEGSEILKGTLVVMLLAYLVRFLAVGFGPVD HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHH SGLHRITRNVDEAARNLGTGTAGLLARVHLPMLRASLLTAAALAFVDIMKEMPITLMTRP HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC FGWDTLAVRVFEMTSEGEWERAALPSLAIVIAGIIPVILLTWRGTRAHG CCCHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLFALTVAALVLIPVAVTFSSFAEVEGDILAHLTEFVLPDLVGNTVWLMFGVGVGVSVLG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH VSLAWLTAMCEFPGRRVFDWALLLPLALPAYVTAFVAIGLLDFTGPLQTWLRDTWNLTGL HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC PEIRSRGGVILVMSLALYPYVYLIARNAFATQGAIALEAAQSLGLSRTRGFFRVALPMAR HHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHCCHHEEHHHHHC PWIAAGMMLALMETLADFGTMAIFNYDTFTTAIYKAWYSLFSLSAAAQLASILILFVLVA HHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVFEQRSRARMRYGAVGRGAASRRIRLSPLLATLAFAYAGIVLAIAFVIPVTQLALWTRD HHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVASDLDNRYWGFAWHSVLLSGIGAAMVVTIALLLAYAGRQRPGSGMAWLQRLATLGYAF HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC PGAVLAVGLFIPVAWLDNQIIEAGHAWFGFEGSEILKGTLVVMLLAYLVRFLAVGFGPVD HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHH SGLHRITRNVDEAARNLGTGTAGLLARVHLPMLRASLLTAAALAFVDIMKEMPITLMTRP HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC FGWDTLAVRVFEMTSEGEWERAALPSLAIVIAGIIPVILLTWRGTRAHG CCCHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800; 7927717 [H]