Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

Click here to switch to the map view.

The map label for this gene is fbpB2 [H]

Identifier: 74317007

GI number: 74317007

Start: 1054602

End: 1056191

Strand: Reverse

Name: fbpB2 [H]

Synonym: Tbd_0989

Alternate gene names: 74317007

Gene position: 1056191-1054602 (Counterclockwise)

Preceding gene: 74317008

Following gene: 74317006

Centisome position: 36.3

GC content: 67.86

Gene sequence:

>1590_bases
ATGCTGTTCGCGCTTACCGTCGCGGCGCTGGTGCTGATTCCGGTCGCCGTCACGTTCTCCTCGTTCGCCGAGGTCGAAGG
CGACATCCTTGCCCACCTGACCGAGTTCGTGCTGCCCGATCTGGTCGGCAACACCGTGTGGCTGATGTTCGGCGTCGGCG
TCGGCGTGAGCGTCCTCGGCGTGTCGCTCGCCTGGCTCACCGCAATGTGCGAATTCCCGGGCCGCCGCGTGTTCGACTGG
GCCCTCCTGCTGCCGCTCGCCTTGCCGGCCTACGTCACGGCCTTCGTCGCGATCGGGCTGCTCGATTTCACCGGGCCGCT
GCAGACCTGGCTGCGCGATACCTGGAACCTTACCGGCCTGCCGGAAATCCGCTCGCGCGGCGGCGTCATTCTCGTGATGT
CGCTCGCGCTCTATCCCTACGTCTACCTGATCGCGCGGAATGCCTTCGCGACCCAAGGCGCGATCGCGCTCGAAGCGGCG
CAGTCGCTCGGCTTGTCGCGCACGCGCGGTTTCTTTCGTGTCGCGCTGCCGATGGCGCGCCCGTGGATCGCGGCCGGCAT
GATGCTCGCGCTCATGGAAACGCTCGCCGACTTCGGCACCATGGCGATCTTCAACTACGACACCTTCACCACCGCGATCT
ACAAGGCGTGGTACAGCCTGTTTTCGCTCTCGGCCGCAGCGCAGCTGGCATCGATCCTGATTCTTTTCGTGCTGGTCGCC
GTCGTGTTCGAACAGCGTTCACGCGCGCGCATGCGCTACGGCGCGGTCGGACGCGGCGCCGCGTCACGCCGCATCCGGCT
CTCGCCGCTGCTCGCCACGCTCGCCTTCGCCTACGCGGGCATCGTGCTCGCGATCGCCTTCGTGATTCCGGTGACGCAGC
TGGCGCTGTGGACGCGCGACGTCGTCGCCAGCGATCTCGACAACCGCTACTGGGGCTTCGCCTGGCATTCGGTGCTGCTG
TCGGGAATCGGTGCGGCGATGGTCGTCACGATCGCGCTGCTGCTCGCCTACGCCGGGCGGCAGCGGCCGGGCTCGGGCAT
GGCCTGGCTGCAGCGCCTCGCGACCCTGGGCTACGCCTTCCCGGGCGCGGTCCTAGCGGTCGGCCTTTTCATCCCCGTCG
CCTGGCTCGACAACCAGATCATCGAGGCCGGCCACGCCTGGTTCGGTTTCGAAGGCTCGGAGATCCTCAAGGGCACGCTC
GTCGTCATGCTGCTCGCCTACCTCGTGCGCTTTCTCGCCGTCGGCTTCGGCCCCGTCGACAGCGGCCTGCATCGCATCAC
GCGCAACGTCGACGAGGCCGCGCGCAACCTCGGCACCGGCACGGCCGGCCTGCTCGCGCGCGTCCATCTGCCGATGCTGC
GCGCAAGCCTGCTGACCGCGGCAGCGCTCGCCTTCGTCGACATCATGAAAGAAATGCCGATCACGCTCATGACGCGGCCC
TTCGGCTGGGACACGCTTGCGGTACGCGTGTTCGAGATGACCTCGGAGGGCGAATGGGAGCGCGCGGCGCTGCCGTCGCT
GGCGATCGTCATCGCCGGTATCATCCCGGTTATTCTCCTGACCTGGCGCGGAACGCGCGCGCACGGCTAA

Upstream 100 bases:

>100_bases
AAATAAACACACCTTGTCCGAAACCGCTGCAGCACCTGCAAAAACGCCCCCCGCGGGCGTTTTTGTTTTCCCTGCGTCCC
GCCGGCGGGCAAGCGGCTGG

Downstream 100 bases:

>100_bases
GCCCCATGGCTGAACTGATCCTCGACTCGGTCTCGCAGTCGTATGCCGCCCGGCAAATCATCGCGGACCTCACTTTCACC
CTGCCCGAAGGTTCGATCGG

Product: iron transport system permease

Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: Iron(III)-transport system permease protein fbpB 2 [H]

Number of amino acids: Translated: 529; Mature: 529

Protein sequence:

>529_residues
MLFALTVAALVLIPVAVTFSSFAEVEGDILAHLTEFVLPDLVGNTVWLMFGVGVGVSVLGVSLAWLTAMCEFPGRRVFDW
ALLLPLALPAYVTAFVAIGLLDFTGPLQTWLRDTWNLTGLPEIRSRGGVILVMSLALYPYVYLIARNAFATQGAIALEAA
QSLGLSRTRGFFRVALPMARPWIAAGMMLALMETLADFGTMAIFNYDTFTTAIYKAWYSLFSLSAAAQLASILILFVLVA
VVFEQRSRARMRYGAVGRGAASRRIRLSPLLATLAFAYAGIVLAIAFVIPVTQLALWTRDVVASDLDNRYWGFAWHSVLL
SGIGAAMVVTIALLLAYAGRQRPGSGMAWLQRLATLGYAFPGAVLAVGLFIPVAWLDNQIIEAGHAWFGFEGSEILKGTL
VVMLLAYLVRFLAVGFGPVDSGLHRITRNVDEAARNLGTGTAGLLARVHLPMLRASLLTAAALAFVDIMKEMPITLMTRP
FGWDTLAVRVFEMTSEGEWERAALPSLAIVIAGIIPVILLTWRGTRAHG

Sequences:

>Translated_529_residues
MLFALTVAALVLIPVAVTFSSFAEVEGDILAHLTEFVLPDLVGNTVWLMFGVGVGVSVLGVSLAWLTAMCEFPGRRVFDW
ALLLPLALPAYVTAFVAIGLLDFTGPLQTWLRDTWNLTGLPEIRSRGGVILVMSLALYPYVYLIARNAFATQGAIALEAA
QSLGLSRTRGFFRVALPMARPWIAAGMMLALMETLADFGTMAIFNYDTFTTAIYKAWYSLFSLSAAAQLASILILFVLVA
VVFEQRSRARMRYGAVGRGAASRRIRLSPLLATLAFAYAGIVLAIAFVIPVTQLALWTRDVVASDLDNRYWGFAWHSVLL
SGIGAAMVVTIALLLAYAGRQRPGSGMAWLQRLATLGYAFPGAVLAVGLFIPVAWLDNQIIEAGHAWFGFEGSEILKGTL
VVMLLAYLVRFLAVGFGPVDSGLHRITRNVDEAARNLGTGTAGLLARVHLPMLRASLLTAAALAFVDIMKEMPITLMTRP
FGWDTLAVRVFEMTSEGEWERAALPSLAIVIAGIIPVILLTWRGTRAHG
>Mature_529_residues
MLFALTVAALVLIPVAVTFSSFAEVEGDILAHLTEFVLPDLVGNTVWLMFGVGVGVSVLGVSLAWLTAMCEFPGRRVFDW
ALLLPLALPAYVTAFVAIGLLDFTGPLQTWLRDTWNLTGLPEIRSRGGVILVMSLALYPYVYLIARNAFATQGAIALEAA
QSLGLSRTRGFFRVALPMARPWIAAGMMLALMETLADFGTMAIFNYDTFTTAIYKAWYSLFSLSAAAQLASILILFVLVA
VVFEQRSRARMRYGAVGRGAASRRIRLSPLLATLAFAYAGIVLAIAFVIPVTQLALWTRDVVASDLDNRYWGFAWHSVLL
SGIGAAMVVTIALLLAYAGRQRPGSGMAWLQRLATLGYAFPGAVLAVGLFIPVAWLDNQIIEAGHAWFGFEGSEILKGTL
VVMLLAYLVRFLAVGFGPVDSGLHRITRNVDEAARNLGTGTAGLLARVHLPMLRASLLTAAALAFVDIMKEMPITLMTRP
FGWDTLAVRVFEMTSEGEWERAALPSLAIVIAGIIPVILLTWRGTRAHG

Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1178

COG function: function code P; ABC-type Fe3+ transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transmembrane type-1 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 57288; Mature: 57288

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFALTVAALVLIPVAVTFSSFAEVEGDILAHLTEFVLPDLVGNTVWLMFGVGVGVSVLG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
VSLAWLTAMCEFPGRRVFDWALLLPLALPAYVTAFVAIGLLDFTGPLQTWLRDTWNLTGL
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC
PEIRSRGGVILVMSLALYPYVYLIARNAFATQGAIALEAAQSLGLSRTRGFFRVALPMAR
HHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHCCHHEEHHHHHC
PWIAAGMMLALMETLADFGTMAIFNYDTFTTAIYKAWYSLFSLSAAAQLASILILFVLVA
HHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVFEQRSRARMRYGAVGRGAASRRIRLSPLLATLAFAYAGIVLAIAFVIPVTQLALWTRD
HHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVASDLDNRYWGFAWHSVLLSGIGAAMVVTIALLLAYAGRQRPGSGMAWLQRLATLGYAF
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC
PGAVLAVGLFIPVAWLDNQIIEAGHAWFGFEGSEILKGTLVVMLLAYLVRFLAVGFGPVD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
SGLHRITRNVDEAARNLGTGTAGLLARVHLPMLRASLLTAAALAFVDIMKEMPITLMTRP
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC
FGWDTLAVRVFEMTSEGEWERAALPSLAIVIAGIIPVILLTWRGTRAHG
CCCHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLFALTVAALVLIPVAVTFSSFAEVEGDILAHLTEFVLPDLVGNTVWLMFGVGVGVSVLG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
VSLAWLTAMCEFPGRRVFDWALLLPLALPAYVTAFVAIGLLDFTGPLQTWLRDTWNLTGL
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC
PEIRSRGGVILVMSLALYPYVYLIARNAFATQGAIALEAAQSLGLSRTRGFFRVALPMAR
HHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHCCHHEEHHHHHC
PWIAAGMMLALMETLADFGTMAIFNYDTFTTAIYKAWYSLFSLSAAAQLASILILFVLVA
HHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVFEQRSRARMRYGAVGRGAASRRIRLSPLLATLAFAYAGIVLAIAFVIPVTQLALWTRD
HHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVASDLDNRYWGFAWHSVLLSGIGAAMVVTIALLLAYAGRQRPGSGMAWLQRLATLGYAF
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC
PGAVLAVGLFIPVAWLDNQIIEAGHAWFGFEGSEILKGTLVVMLLAYLVRFLAVGFGPVD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
SGLHRITRNVDEAARNLGTGTAGLLARVHLPMLRASLLTAAALAFVDIMKEMPITLMTRP
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC
FGWDTLAVRVFEMTSEGEWERAALPSLAIVIAGIIPVILLTWRGTRAHG
CCCHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]

Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800; 7927717 [H]