Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316991

Identifier: 74316991

GI number: 74316991

Start: 1037077

End: 1038534

Strand: Direct

Name: 74316991

Synonym: Tbd_0973

Alternate gene names: NA

Gene position: 1037077-1038534 (Clockwise)

Preceding gene: 74316984

Following gene: 74316993

Centisome position: 35.64

GC content: 69.41

Gene sequence:

>1458_bases
ATGTTCCGTAACACGAGGCTGCTCGGCACGGCGATCGCCGGCCTGGCCGTGGCGGGCCTGTCCGCAGGCGCGTCCGCCAC
GAACGATATCGTCAGCCGGGTCGCCGACCGCGAGAGCGTCGCACTCACGCTCTACGCCGACGATCTCGCCCTGATCAAGG
ACGTCCGCCGCGTCCGCCTGGGTCCCGACATGAACCGCCTGAGTTGGCTCGACGTCGCCGCGCAGCTTCGCCCGGAGACG
GTGCGCTTGCGCAATCTGTCCGATCCCGCCGGCTTTCGGGTCAGCGAGCAGGCCTTCGATTTCGACCTGCTGACGCCAGA
AAGACTGATCGAGCACTACGTCGGGCGCGAAGTCGGTGTCATCCGAACACATCCGGGCACGGGCGCCGAAAGCCGCGAGA
AGGCGACGCTGCTGACGAGCCGCGGCGGCGTCGTGCTGCAGTTCCCCGACCGCGTCGAAACAGGAATGCCGGCCCGGCTC
GCATTTCCCGCCGTGCCCGACGCGCTCCACACGGCGCCCGCACTCGTCTTTTCGCTCGCCGACGCGCGGGCGGGCGCGCA
GCGGCTCGAGCTTTCGTATCTGACGACGGGCCTCTCGTGGCGCGCGGATTACGTCGTGGAACTCCGCGACGATGGGGCGC
ATCTGGATCTCGACGGTTGGGTGACGCTGGTCAACCAGAGTGGCGCCGCCTATCGCGACGCCCGGCTGCAGTTCGTCGCC
GGCACGCTCAACCGCGTCCGCGACGGGGCGCAGCCGCTGGCGCGCGAGTCGATGTCGCTCGGCGCGAAGTCCGCGGGTGG
CGCGTATCTGCAGCCCGAGCCGCTGGCCGGCCATCATCTCTATACGCTGCCGCAGCCGACGAGCCTCGCGGAAAACCAGA
CCAAGCAGGTCGCACTCCTGCGCGCGGCGCGCGTGCCGGTCAGGAAGGAACTCGTGCTGCAGGGCGTCGGCCACATCTAT
ACGGGCCGCTATCCGGCCCCGTCGCAGCCGGCGCACGTCGGCATGTTCCTCGAATTTGAAAACCGGGGCGCCGGCCTCGG
GCTGCCCTTGCCTGCGGGCGTCGTGCGCGTCTACGAGCAGGATGCCCGTGGCAGCAGCCAGTTCGTCGGCGAGGACCGGA
TCGGCCACACGCCGAGGAACGAATCGCTCCGGCTGACGCTCGGCGAAGCCTTCGACCACACCGCCGAACGCAGGCAGACG
GCTTTCGAGCAACGGCCCGGCACGCAGCGTGACGCCGCCGTCTACGAGTCGGCGCATGAAATCGTGTTGAAGAACGCAGG
GAAGGAAACGGCGACCGTCACGGTCCGCGAGCCGATCCCCGGCGACTGGGAGATACTTTCCGAGTCGCGGCCGCACGCGC
GACCCGACGCCGGCACCGCCGAGTGGAAGCTGCGCGTGCCGGGCGGCGGCAAAGCGACGCTCGTTTATCGCGTGCGCGTC
AAGGGCCTGATGCAGTAG

Upstream 100 bases:

>100_bases
GTCATGGCGTTCGCTGCGGGTTTGCCCGGCATTCTAGCGCCGCGCGGCAGTTTCGCCGATATCGTGCATCATGGGCGCTA
CGCTGCAAGGAGGAAAAACC

Downstream 100 bases:

>100_bases
GGCTCGCCGCGTGGAATGGCGGCGGCGCGACGGCGTCGGGGCGTGCGTTAGGTACTGAGGCCGCGGCGCCGCCGGATGTC
GGCGATGAGGCCCTGGGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 485; Mature: 485

Protein sequence:

>485_residues
MFRNTRLLGTAIAGLAVAGLSAGASATNDIVSRVADRESVALTLYADDLALIKDVRRVRLGPDMNRLSWLDVAAQLRPET
VRLRNLSDPAGFRVSEQAFDFDLLTPERLIEHYVGREVGVIRTHPGTGAESREKATLLTSRGGVVLQFPDRVETGMPARL
AFPAVPDALHTAPALVFSLADARAGAQRLELSYLTTGLSWRADYVVELRDDGAHLDLDGWVTLVNQSGAAYRDARLQFVA
GTLNRVRDGAQPLARESMSLGAKSAGGAYLQPEPLAGHHLYTLPQPTSLAENQTKQVALLRAARVPVRKELVLQGVGHIY
TGRYPAPSQPAHVGMFLEFENRGAGLGLPLPAGVVRVYEQDARGSSQFVGEDRIGHTPRNESLRLTLGEAFDHTAERRQT
AFEQRPGTQRDAAVYESAHEIVLKNAGKETATVTVREPIPGDWEILSESRPHARPDAGTAEWKLRVPGGGKATLVYRVRV
KGLMQ

Sequences:

>Translated_485_residues
MFRNTRLLGTAIAGLAVAGLSAGASATNDIVSRVADRESVALTLYADDLALIKDVRRVRLGPDMNRLSWLDVAAQLRPET
VRLRNLSDPAGFRVSEQAFDFDLLTPERLIEHYVGREVGVIRTHPGTGAESREKATLLTSRGGVVLQFPDRVETGMPARL
AFPAVPDALHTAPALVFSLADARAGAQRLELSYLTTGLSWRADYVVELRDDGAHLDLDGWVTLVNQSGAAYRDARLQFVA
GTLNRVRDGAQPLARESMSLGAKSAGGAYLQPEPLAGHHLYTLPQPTSLAENQTKQVALLRAARVPVRKELVLQGVGHIY
TGRYPAPSQPAHVGMFLEFENRGAGLGLPLPAGVVRVYEQDARGSSQFVGEDRIGHTPRNESLRLTLGEAFDHTAERRQT
AFEQRPGTQRDAAVYESAHEIVLKNAGKETATVTVREPIPGDWEILSESRPHARPDAGTAEWKLRVPGGGKATLVYRVRV
KGLMQ
>Mature_485_residues
MFRNTRLLGTAIAGLAVAGLSAGASATNDIVSRVADRESVALTLYADDLALIKDVRRVRLGPDMNRLSWLDVAAQLRPET
VRLRNLSDPAGFRVSEQAFDFDLLTPERLIEHYVGREVGVIRTHPGTGAESREKATLLTSRGGVVLQFPDRVETGMPARL
AFPAVPDALHTAPALVFSLADARAGAQRLELSYLTTGLSWRADYVVELRDDGAHLDLDGWVTLVNQSGAAYRDARLQFVA
GTLNRVRDGAQPLARESMSLGAKSAGGAYLQPEPLAGHHLYTLPQPTSLAENQTKQVALLRAARVPVRKELVLQGVGHIY
TGRYPAPSQPAHVGMFLEFENRGAGLGLPLPAGVVRVYEQDARGSSQFVGEDRIGHTPRNESLRLTLGEAFDHTAERRQT
AFEQRPGTQRDAAVYESAHEIVLKNAGKETATVTVREPIPGDWEILSESRPHARPDAGTAEWKLRVPGGGKATLVYRVRV
KGLMQ

Specific function: Unknown

COG id: COG5316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52737; Mature: 52737

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRNTRLLGTAIAGLAVAGLSAGASATNDIVSRVADRESVALTLYADDLALIKDVRRVRL
CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHC
GPDMNRLSWLDVAAQLRPETVRLRNLSDPAGFRVSEQAFDFDLLTPERLIEHYVGREVGV
CCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCEECHHHCCCCCCCHHHHHHHHCCCCCCE
IRTHPGTGAESREKATLLTSRGGVVLQFPDRVETGMPARLAFPAVPDALHTAPALVFSLA
EEECCCCCCCCCCCEEEEECCCCEEEECCCHHCCCCCCEEECCCCCHHHHHHHHHHHHHH
DARAGAQRLELSYLTTGLSWRADYVVELRDDGAHLDLDGWVTLVNQSGAAYRDARLQFVA
HHHCCHHHEEEEHEECCCCCCCEEEEEEECCCCEEECCCEEEEEECCCCCCHHHHHHHHH
GTLNRVRDGAQPLARESMSLGAKSAGGAYLQPEPLAGHHLYTLPQPTSLAENQTKQVALL
HHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHCHHHHHHHH
RAARVPVRKELVLQGVGHIYTGRYPAPSQPAHVGMFLEFENRGAGLGLPLPAGVVRVYEQ
HHHCCCHHHHHHHHCCCHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHH
DARGSSQFVGEDRIGHTPRNESLRLTLGEAFDHTAERRQTAFEQRPGTQRDAAVYESAHE
CCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
IVLKNAGKETATVTVREPIPGDWEILSESRPHARPDAGTAEWKLRVPGGGKATLVYRVRV
HHHHCCCCCEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEE
KGLMQ
CCCCC
>Mature Secondary Structure
MFRNTRLLGTAIAGLAVAGLSAGASATNDIVSRVADRESVALTLYADDLALIKDVRRVRL
CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHC
GPDMNRLSWLDVAAQLRPETVRLRNLSDPAGFRVSEQAFDFDLLTPERLIEHYVGREVGV
CCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCEECHHHCCCCCCCHHHHHHHHCCCCCCE
IRTHPGTGAESREKATLLTSRGGVVLQFPDRVETGMPARLAFPAVPDALHTAPALVFSLA
EEECCCCCCCCCCCEEEEECCCCEEEECCCHHCCCCCCEEECCCCCHHHHHHHHHHHHHH
DARAGAQRLELSYLTTGLSWRADYVVELRDDGAHLDLDGWVTLVNQSGAAYRDARLQFVA
HHHCCHHHEEEEHEECCCCCCCEEEEEEECCCCEEECCCEEEEEECCCCCCHHHHHHHHH
GTLNRVRDGAQPLARESMSLGAKSAGGAYLQPEPLAGHHLYTLPQPTSLAENQTKQVALL
HHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHCHHHHHHHH
RAARVPVRKELVLQGVGHIYTGRYPAPSQPAHVGMFLEFENRGAGLGLPLPAGVVRVYEQ
HHHCCCHHHHHHHHCCCHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHH
DARGSSQFVGEDRIGHTPRNESLRLTLGEAFDHTAERRQTAFEQRPGTQRDAAVYESAHE
CCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
IVLKNAGKETATVTVREPIPGDWEILSESRPHARPDAGTAEWKLRVPGGGKATLVYRVRV
HHHHCCCCCEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEE
KGLMQ
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA