| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316889
Identifier: 74316889
GI number: 74316889
Start: 920511
End: 921422
Strand: Reverse
Name: 74316889
Synonym: Tbd_0871
Alternate gene names: NA
Gene position: 921422-920511 (Counterclockwise)
Preceding gene: 74316890
Following gene: 74316888
Centisome position: 31.67
GC content: 60.96
Gene sequence:
>912_bases ATGAATGAAGCCGAATTCAAAGACCTGATCGAAGACTCCCCGTTCGCGGGCAGCCCGGTCAAACCCACCATGCTGGCCGA AGACGCCAAGCTGCAGTTCCGCTGCCATCGCGACGTCAAGTGCTGGAATGCCTGCTGCAGCAACATCGACATTCCTTTGA CCCCCTACGACGTCCTGCGTCTGAAAAAGCGCCTGGACATGTCGTCCGGCGAATTCCTCAAGCAGTACTCGGTGCCGTTC GAGATGGACAAGGACGGCATGCCCGGCATCAAACTGAACCCGGTCGAAGGCGGTACTGCCTGCCAGTTCATGACGCCGGA AGGCTGCGGCGTCTACGAAGACCGCCCCACCGCCTGCCGCTATTACCCGGTGGCGCTGTTGACCATGCGCCGTTCGGACG AGTACGTCGACCGCAGCGCCTACGCGCTGGTGAGGGAACCCCACTGCCTTGGCCACTTCGAGGATAAGATCCAGACCATC GAGGAATACCGCCACGAACAGGGCGTTGACGAGTACGACCGGAAAGGGCATGCATGGCGCCAGCTGGTGGTCAAGCGCAA ATCGGCCGGCCCTGCCATCGGCAAGCCGACTCCGGTTTCCAACCAGTTGTTCTTCATGGCGAGCTACGACGTCGACCGCT TCCGTGCCTTCGTCATGAGCCCGAGTTTCAACGACACCTACGACATTCCGGTCGAAATCATGGCGACGCTCATCGCCGAC GACGAAGCCCTGCTCGATTTCGGCCTGAACTTCCTGCGCCACGCGCTGTTCGGCGAAAAATTCGTCGAGGAGCGGCCGGA CGCCTACGAGAAGCGTCTCGCCCGTCGCCGGGCTCTGGCCGAGCAGGAGAAGGAAGCCGCATTCCAGCAGAAGATGGCGC TGGAGGACGACAAATATTCAGCCGATCACTGA
Upstream 100 bases:
>100_bases AGGTTGTTCAGCATCCAGCCGAAAGCGCGTACCCTACGCACTCCCGACTGTGTGTTATTTGATTTTTGAAGTGAGGGGCC GTGCCCCATGAGGTTGAACC
Downstream 100 bases:
>100_bases GACCATGCGCCGCCTGCTCGCCTCTGCCGTCCTCGCCGCTCTGCTGCTGCCGCCTGTAGCCGGCGCCGAGAGCCTCAACA AGTGCGTCGGCGCGGCGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MNEAEFKDLIEDSPFAGSPVKPTMLAEDAKLQFRCHRDVKCWNACCSNIDIPLTPYDVLRLKKRLDMSSGEFLKQYSVPF EMDKDGMPGIKLNPVEGGTACQFMTPEGCGVYEDRPTACRYYPVALLTMRRSDEYVDRSAYALVREPHCLGHFEDKIQTI EEYRHEQGVDEYDRKGHAWRQLVVKRKSAGPAIGKPTPVSNQLFFMASYDVDRFRAFVMSPSFNDTYDIPVEIMATLIAD DEALLDFGLNFLRHALFGEKFVEERPDAYEKRLARRRALAEQEKEAAFQQKMALEDDKYSADH
Sequences:
>Translated_303_residues MNEAEFKDLIEDSPFAGSPVKPTMLAEDAKLQFRCHRDVKCWNACCSNIDIPLTPYDVLRLKKRLDMSSGEFLKQYSVPF EMDKDGMPGIKLNPVEGGTACQFMTPEGCGVYEDRPTACRYYPVALLTMRRSDEYVDRSAYALVREPHCLGHFEDKIQTI EEYRHEQGVDEYDRKGHAWRQLVVKRKSAGPAIGKPTPVSNQLFFMASYDVDRFRAFVMSPSFNDTYDIPVEIMATLIAD DEALLDFGLNFLRHALFGEKFVEERPDAYEKRLARRRALAEQEKEAAFQQKMALEDDKYSADH >Mature_303_residues MNEAEFKDLIEDSPFAGSPVKPTMLAEDAKLQFRCHRDVKCWNACCSNIDIPLTPYDVLRLKKRLDMSSGEFLKQYSVPF EMDKDGMPGIKLNPVEGGTACQFMTPEGCGVYEDRPTACRYYPVALLTMRRSDEYVDRSAYALVREPHCLGHFEDKIQTI EEYRHEQGVDEYDRKGHAWRQLVVKRKSAGPAIGKPTPVSNQLFFMASYDVDRFRAFVMSPSFNDTYDIPVEIMATLIAD DEALLDFGLNFLRHALFGEKFVEERPDAYEKRLARRRALAEQEKEAAFQQKMALEDDKYSADH
Specific function: Unknown
COG id: COG0727
COG function: function code R; Predicted Fe-S-cluster oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34829; Mature: 34829
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEAEFKDLIEDSPFAGSPVKPTMLAEDAKLQFRCHRDVKCWNACCSNIDIPLTPYDVLR CCHHHHHHHHCCCCCCCCCCCCHHCCCCCCEEEEECCCHHHHHHHHCCCCCCCCCHHHHH LKKRLDMSSGEFLKQYSVPFEMDKDGMPGIKLNPVEGGTACQFMTPEGCGVYEDRPTACR HHHHCCCCCCHHHHHHCCCCEECCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCEE YYPVALLTMRRSDEYVDRSAYALVREPHCLGHFEDKIQTIEEYRHEQGVDEYDRKGHAWR EEHHHHEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHH QLVVKRKSAGPAIGKPTPVSNQLFFMASYDVDRFRAFVMSPSFNDTYDIPVEIMATLIAD HHHHHHHCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCC DEALLDFGLNFLRHALFGEKFVEERPDAYEKRLARRRALAEQEKEAAFQQKMALEDDKYS CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC ADH CCC >Mature Secondary Structure MNEAEFKDLIEDSPFAGSPVKPTMLAEDAKLQFRCHRDVKCWNACCSNIDIPLTPYDVLR CCHHHHHHHHCCCCCCCCCCCCHHCCCCCCEEEEECCCHHHHHHHHCCCCCCCCCHHHHH LKKRLDMSSGEFLKQYSVPFEMDKDGMPGIKLNPVEGGTACQFMTPEGCGVYEDRPTACR HHHHCCCCCCHHHHHHCCCCEECCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCEE YYPVALLTMRRSDEYVDRSAYALVREPHCLGHFEDKIQTIEEYRHEQGVDEYDRKGHAWR EEHHHHEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHH QLVVKRKSAGPAIGKPTPVSNQLFFMASYDVDRFRAFVMSPSFNDTYDIPVEIMATLIAD HHHHHHHCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCC DEALLDFGLNFLRHALFGEKFVEERPDAYEKRLARRRALAEQEKEAAFQQKMALEDDKYS CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC ADH CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA