Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316889

Identifier: 74316889

GI number: 74316889

Start: 920511

End: 921422

Strand: Reverse

Name: 74316889

Synonym: Tbd_0871

Alternate gene names: NA

Gene position: 921422-920511 (Counterclockwise)

Preceding gene: 74316890

Following gene: 74316888

Centisome position: 31.67

GC content: 60.96

Gene sequence:

>912_bases
ATGAATGAAGCCGAATTCAAAGACCTGATCGAAGACTCCCCGTTCGCGGGCAGCCCGGTCAAACCCACCATGCTGGCCGA
AGACGCCAAGCTGCAGTTCCGCTGCCATCGCGACGTCAAGTGCTGGAATGCCTGCTGCAGCAACATCGACATTCCTTTGA
CCCCCTACGACGTCCTGCGTCTGAAAAAGCGCCTGGACATGTCGTCCGGCGAATTCCTCAAGCAGTACTCGGTGCCGTTC
GAGATGGACAAGGACGGCATGCCCGGCATCAAACTGAACCCGGTCGAAGGCGGTACTGCCTGCCAGTTCATGACGCCGGA
AGGCTGCGGCGTCTACGAAGACCGCCCCACCGCCTGCCGCTATTACCCGGTGGCGCTGTTGACCATGCGCCGTTCGGACG
AGTACGTCGACCGCAGCGCCTACGCGCTGGTGAGGGAACCCCACTGCCTTGGCCACTTCGAGGATAAGATCCAGACCATC
GAGGAATACCGCCACGAACAGGGCGTTGACGAGTACGACCGGAAAGGGCATGCATGGCGCCAGCTGGTGGTCAAGCGCAA
ATCGGCCGGCCCTGCCATCGGCAAGCCGACTCCGGTTTCCAACCAGTTGTTCTTCATGGCGAGCTACGACGTCGACCGCT
TCCGTGCCTTCGTCATGAGCCCGAGTTTCAACGACACCTACGACATTCCGGTCGAAATCATGGCGACGCTCATCGCCGAC
GACGAAGCCCTGCTCGATTTCGGCCTGAACTTCCTGCGCCACGCGCTGTTCGGCGAAAAATTCGTCGAGGAGCGGCCGGA
CGCCTACGAGAAGCGTCTCGCCCGTCGCCGGGCTCTGGCCGAGCAGGAGAAGGAAGCCGCATTCCAGCAGAAGATGGCGC
TGGAGGACGACAAATATTCAGCCGATCACTGA

Upstream 100 bases:

>100_bases
AGGTTGTTCAGCATCCAGCCGAAAGCGCGTACCCTACGCACTCCCGACTGTGTGTTATTTGATTTTTGAAGTGAGGGGCC
GTGCCCCATGAGGTTGAACC

Downstream 100 bases:

>100_bases
GACCATGCGCCGCCTGCTCGCCTCTGCCGTCCTCGCCGCTCTGCTGCTGCCGCCTGTAGCCGGCGCCGAGAGCCTCAACA
AGTGCGTCGGCGCGGCGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MNEAEFKDLIEDSPFAGSPVKPTMLAEDAKLQFRCHRDVKCWNACCSNIDIPLTPYDVLRLKKRLDMSSGEFLKQYSVPF
EMDKDGMPGIKLNPVEGGTACQFMTPEGCGVYEDRPTACRYYPVALLTMRRSDEYVDRSAYALVREPHCLGHFEDKIQTI
EEYRHEQGVDEYDRKGHAWRQLVVKRKSAGPAIGKPTPVSNQLFFMASYDVDRFRAFVMSPSFNDTYDIPVEIMATLIAD
DEALLDFGLNFLRHALFGEKFVEERPDAYEKRLARRRALAEQEKEAAFQQKMALEDDKYSADH

Sequences:

>Translated_303_residues
MNEAEFKDLIEDSPFAGSPVKPTMLAEDAKLQFRCHRDVKCWNACCSNIDIPLTPYDVLRLKKRLDMSSGEFLKQYSVPF
EMDKDGMPGIKLNPVEGGTACQFMTPEGCGVYEDRPTACRYYPVALLTMRRSDEYVDRSAYALVREPHCLGHFEDKIQTI
EEYRHEQGVDEYDRKGHAWRQLVVKRKSAGPAIGKPTPVSNQLFFMASYDVDRFRAFVMSPSFNDTYDIPVEIMATLIAD
DEALLDFGLNFLRHALFGEKFVEERPDAYEKRLARRRALAEQEKEAAFQQKMALEDDKYSADH
>Mature_303_residues
MNEAEFKDLIEDSPFAGSPVKPTMLAEDAKLQFRCHRDVKCWNACCSNIDIPLTPYDVLRLKKRLDMSSGEFLKQYSVPF
EMDKDGMPGIKLNPVEGGTACQFMTPEGCGVYEDRPTACRYYPVALLTMRRSDEYVDRSAYALVREPHCLGHFEDKIQTI
EEYRHEQGVDEYDRKGHAWRQLVVKRKSAGPAIGKPTPVSNQLFFMASYDVDRFRAFVMSPSFNDTYDIPVEIMATLIAD
DEALLDFGLNFLRHALFGEKFVEERPDAYEKRLARRRALAEQEKEAAFQQKMALEDDKYSADH

Specific function: Unknown

COG id: COG0727

COG function: function code R; Predicted Fe-S-cluster oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34829; Mature: 34829

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEAEFKDLIEDSPFAGSPVKPTMLAEDAKLQFRCHRDVKCWNACCSNIDIPLTPYDVLR
CCHHHHHHHHCCCCCCCCCCCCHHCCCCCCEEEEECCCHHHHHHHHCCCCCCCCCHHHHH
LKKRLDMSSGEFLKQYSVPFEMDKDGMPGIKLNPVEGGTACQFMTPEGCGVYEDRPTACR
HHHHCCCCCCHHHHHHCCCCEECCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCEE
YYPVALLTMRRSDEYVDRSAYALVREPHCLGHFEDKIQTIEEYRHEQGVDEYDRKGHAWR
EEHHHHEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHH
QLVVKRKSAGPAIGKPTPVSNQLFFMASYDVDRFRAFVMSPSFNDTYDIPVEIMATLIAD
HHHHHHHCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCC
DEALLDFGLNFLRHALFGEKFVEERPDAYEKRLARRRALAEQEKEAAFQQKMALEDDKYS
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
ADH
CCC
>Mature Secondary Structure
MNEAEFKDLIEDSPFAGSPVKPTMLAEDAKLQFRCHRDVKCWNACCSNIDIPLTPYDVLR
CCHHHHHHHHCCCCCCCCCCCCHHCCCCCCEEEEECCCHHHHHHHHCCCCCCCCCHHHHH
LKKRLDMSSGEFLKQYSVPFEMDKDGMPGIKLNPVEGGTACQFMTPEGCGVYEDRPTACR
HHHHCCCCCCHHHHHHCCCCEECCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCEE
YYPVALLTMRRSDEYVDRSAYALVREPHCLGHFEDKIQTIEEYRHEQGVDEYDRKGHAWR
EEHHHHEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHH
QLVVKRKSAGPAIGKPTPVSNQLFFMASYDVDRFRAFVMSPSFNDTYDIPVEIMATLIAD
HHHHHHHCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCC
DEALLDFGLNFLRHALFGEKFVEERPDAYEKRLARRRALAEQEKEAAFQQKMALEDDKYS
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
ADH
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA