| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316888
Identifier: 74316888
GI number: 74316888
Start: 920066
End: 920506
Strand: Reverse
Name: 74316888
Synonym: Tbd_0870
Alternate gene names: NA
Gene position: 920506-920066 (Counterclockwise)
Preceding gene: 74316889
Following gene: 74316887
Centisome position: 31.63
GC content: 70.29
Gene sequence:
>441_bases ATGCGCCGCCTGCTCGCCTCTGCCGTCCTCGCCGCTCTGCTGCTGCCGCCTGTAGCCGGCGCCGAGAGCCTCAACAAGTG CGTCGGCGCGGCGGGCGAGGTGACCTATTCGAATCTCCCATGCCGCGGCGCCCGGCACGTCGAGGCACTGCCGATCGACC CGCCACCCGAGCCGCCCGCCGGGGCCAAGGCGGCGCCCGTCGTCACGGCCACACCGACGCTCGATCGTGAGACCGGCCAG CCGGCGGCGGCAGGCATCCGCATGCGCCGGGTCGCGACGAGCGACGCACGACGCTGCGACGCGATCACTGAGAAACTCGG CCGCGTGACGGACACGATGGACCAGGCGCGACGCAAGGGCTACACCCTCGACGAGGCGGACAAATGGGGGCGCGAAATCA AGGATCTCCAACGCAAAAAGCAGCAGGCTGGCTGTTTCTGA
Upstream 100 bases:
>100_bases CTCGCCCGTCGCCGGGCTCTGGCCGAGCAGGAGAAGGAAGCCGCATTCCAGCAGAAGATGGCGCTGGAGGACGACAAATA TTCAGCCGATCACTGAGACC
Downstream 100 bases:
>100_bases GTCCATGAATGCGCGCACTCTCGACCCGACCGAGCGCCTGATCGAGAAGGAGCCCTATTACGAGCCTGTCGGCGAGGAAA TCGCGCTCTTCGAGGCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MRRLLASAVLAALLLPPVAGAESLNKCVGAAGEVTYSNLPCRGARHVEALPIDPPPEPPAGAKAAPVVTATPTLDRETGQ PAAAGIRMRRVATSDARRCDAITEKLGRVTDTMDQARRKGYTLDEADKWGREIKDLQRKKQQAGCF
Sequences:
>Translated_146_residues MRRLLASAVLAALLLPPVAGAESLNKCVGAAGEVTYSNLPCRGARHVEALPIDPPPEPPAGAKAAPVVTATPTLDRETGQ PAAAGIRMRRVATSDARRCDAITEKLGRVTDTMDQARRKGYTLDEADKWGREIKDLQRKKQQAGCF >Mature_146_residues MRRLLASAVLAALLLPPVAGAESLNKCVGAAGEVTYSNLPCRGARHVEALPIDPPPEPPAGAKAAPVVTATPTLDRETGQ PAAAGIRMRRVATSDARRCDAITEKLGRVTDTMDQARRKGYTLDEADKWGREIKDLQRKKQQAGCF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15601; Mature: 15601
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLLASAVLAALLLPPVAGAESLNKCVGAAGEVTYSNLPCRGARHVEALPIDPPPEPPA CHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC GAKAAPVVTATPTLDRETGQPAAAGIRMRRVATSDARRCDAITEKLGRVTDTMDQARRKG CCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC YTLDEADKWGREIKDLQRKKQQAGCF CCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRRLLASAVLAALLLPPVAGAESLNKCVGAAGEVTYSNLPCRGARHVEALPIDPPPEPPA CHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC GAKAAPVVTATPTLDRETGQPAAAGIRMRRVATSDARRCDAITEKLGRVTDTMDQARRKG CCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC YTLDEADKWGREIKDLQRKKQQAGCF CCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA