Click here to switch to the map view.

The map label for this gene is ytfM [H]

Identifier: 74316851

GI number: 74316851

Start: 880137

End: 881894

Strand: Direct

Name: ytfM [H]

Synonym: Tbd_0833

Alternate gene names: 74316851

Gene position: 880137-881894 (Clockwise)

Preceding gene: 74316850

Following gene: 74316852

Centisome position: 30.25

GC content: 71.33

Gene sequence:

>1758_bases
GTGCCCACCTCCACCGCGCCTGCCGTCGTGCCCCGCCTGCTCAAGACGCTGCTGTTGCTGGCGGCGCTGCACGCGTCGGC
GGCGCGCGCGCTCAGCGTCGAGGTGCAGGCGCCCGAGGAGATCGCGGCGCTGCTGCGCGAGCATCTGGAGACCGCCCGCG
CGGCGCGCCTCGGCGAGAAGCCCGATGCTGACGAAATCGCGCGCCTGCAGCGCAAGAGCGAAGAGACGGCGCGCGACCTG
CTCGCGACCGAGGGGTATTTTTCTCCGCGCATCGACAGCGTCGTGACGCCCGTGGGCGACGACTGGCGCGTGTCCTACCG
GGTCGAGCCGGGGCCCCGCACGACGGTGCGCCGCGCCGTGCTCCGCTTCGAAGGCGCGGTCGCGCGCGATGAGGCCCGCG
GCCTGCGCGCCCGGCTCGCGCGCGCGTTTGCCGAGAACGCAGGCAAGCCGTTCCGCCAGGCCGAATGGGAAGCCGCGAAG
CTCGCGGTGCTGCGCCTCCTGCTCGCGAACGCCTACCTCGCCGCCCGCATCGCGACGAGCGAGGCGCGCGTCGACCCCGC
GGCGCGCGCCGCCGATCTCAGCGTCACGATCGACAGCGGACCCGCGTTCCACTACGGCGCCCCCGTCGTCAGCGGAACCG
CGCGCTATCCCGAATCGATCGTGCGCAACCTCAATCCGGCGGCACCCGGCAAGCCCGTGCGCCAGCAGGACCTGCTCGAC
TACCAGATGGCCCTCGAGGCGAGCGGCTATTTCGCGCAGGCGACGGTGCGCGTCGAGCCCGACCCGGCACGCGCGGCGGC
GATCCCGATCGAGGTCACGGTCGTCGAGCGTCCGCTCAAGCGCTTCAGCGTCGGCGCGGGGGTGAGTACCGACACCGGCG
CGCGCGTGCAGGCCGCGTGGCTGCATCGCGACATCCTCGACCGCGGCATGCGCCTGCGGCTCGAGTCGCGGCTCGAGACG
ACGCGGCAAAGCGGGCTCGCCGAGCTGACCTGGCCGCGCAACACCAAGCGTTACGAACACAGCCTCGGCCTGCAGCTCAG
GCAGGAGGAAATCGAAGGCCAGGAGACGCATGCGACCGTGCTCGCGGCGCGGCGCAATCTGCTGCGCGGCAAGATCGAGA
CCAACCTGACGCTGCAATACCAGACCGAGGAGCAGTCGGTCGGCGATGCCCCGGAGGTCCGCAACCAGGCCCTGACCGCG
AACTACGCGTGGACCAAGCGCGCGATCGGGCGCGCCTTCTATCCGCGGCGCGGCTACGTCCTCAGCCTGCAGGGCGGCGG
GGCCTCGGAAGCGCTGTTGTCCGACACCAGCTTCGTTCGCCTCTACGGCCGCCATATCCATTACCTGCCGGCCGGTGACC
GCGGCCGCCTCGTGCTGCGCGGCGAATTCGGCAGCGTGCTCGCCGATACGCGCGACGGCATTCCGACCGATTTCCTGTTC
CGCGCCGGCGGCGACAACTCGGTGCGCGGCTACGCCTACCAGAGTCTCGGCGAACCGGTCGACGGCGGCGTCGCCTCGGT
GCGCTATCTCGCGACCGGCAGCGTCGAATACAACTATTTCTTCACGCGCAACTGGGGCGCGGCGGTCTTCGTCGACGCCG
GTGACGCTGCCGACAGCACAGCGGCGCTGTCGCCGGTATTCGGCTACGGCGTCGGCGCCCGCTATCGTTCACCGGTGGGT
CCGGTCAACGTCGACGTCGCCTACGGCGAGGCGACCGACGAGGTCCGCCTGCATTTCTCGCTCGGGGTGTCGTTTTGA

Upstream 100 bases:

>100_bases
GCACCGTGCCCTGAACCCTAGCCCCGCGGGCTCCTTCGCGCGCCGGCGCCCGAGCCTCCCCGGTCTTGGGCGCGAGCCCG
CGTGCCCCTAGAATTGAAAA

Downstream 100 bases:

>100_bases
AGCGCGCTGGCTGGGTGCTCGCGGGTTTGCTCGGACTCCTGGCGCTGCTGCTTGGGGCTGCCGCCACGCTGGCGACGACG
GCAACGGGTTTTCGCTGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 585; Mature: 584

Protein sequence:

>585_residues
MPTSTAPAVVPRLLKTLLLLAALHASAARALSVEVQAPEEIAALLREHLETARAARLGEKPDADEIARLQRKSEETARDL
LATEGYFSPRIDSVVTPVGDDWRVSYRVEPGPRTTVRRAVLRFEGAVARDEARGLRARLARAFAENAGKPFRQAEWEAAK
LAVLRLLLANAYLAARIATSEARVDPAARAADLSVTIDSGPAFHYGAPVVSGTARYPESIVRNLNPAAPGKPVRQQDLLD
YQMALEASGYFAQATVRVEPDPARAAAIPIEVTVVERPLKRFSVGAGVSTDTGARVQAAWLHRDILDRGMRLRLESRLET
TRQSGLAELTWPRNTKRYEHSLGLQLRQEEIEGQETHATVLAARRNLLRGKIETNLTLQYQTEEQSVGDAPEVRNQALTA
NYAWTKRAIGRAFYPRRGYVLSLQGGGASEALLSDTSFVRLYGRHIHYLPAGDRGRLVLRGEFGSVLADTRDGIPTDFLF
RAGGDNSVRGYAYQSLGEPVDGGVASVRYLATGSVEYNYFFTRNWGAAVFVDAGDAADSTAALSPVFGYGVGARYRSPVG
PVNVDVAYGEATDEVRLHFSLGVSF

Sequences:

>Translated_585_residues
MPTSTAPAVVPRLLKTLLLLAALHASAARALSVEVQAPEEIAALLREHLETARAARLGEKPDADEIARLQRKSEETARDL
LATEGYFSPRIDSVVTPVGDDWRVSYRVEPGPRTTVRRAVLRFEGAVARDEARGLRARLARAFAENAGKPFRQAEWEAAK
LAVLRLLLANAYLAARIATSEARVDPAARAADLSVTIDSGPAFHYGAPVVSGTARYPESIVRNLNPAAPGKPVRQQDLLD
YQMALEASGYFAQATVRVEPDPARAAAIPIEVTVVERPLKRFSVGAGVSTDTGARVQAAWLHRDILDRGMRLRLESRLET
TRQSGLAELTWPRNTKRYEHSLGLQLRQEEIEGQETHATVLAARRNLLRGKIETNLTLQYQTEEQSVGDAPEVRNQALTA
NYAWTKRAIGRAFYPRRGYVLSLQGGGASEALLSDTSFVRLYGRHIHYLPAGDRGRLVLRGEFGSVLADTRDGIPTDFLF
RAGGDNSVRGYAYQSLGEPVDGGVASVRYLATGSVEYNYFFTRNWGAAVFVDAGDAADSTAALSPVFGYGVGARYRSPVG
PVNVDVAYGEATDEVRLHFSLGVSF
>Mature_584_residues
PTSTAPAVVPRLLKTLLLLAALHASAARALSVEVQAPEEIAALLREHLETARAARLGEKPDADEIARLQRKSEETARDLL
ATEGYFSPRIDSVVTPVGDDWRVSYRVEPGPRTTVRRAVLRFEGAVARDEARGLRARLARAFAENAGKPFRQAEWEAAKL
AVLRLLLANAYLAARIATSEARVDPAARAADLSVTIDSGPAFHYGAPVVSGTARYPESIVRNLNPAAPGKPVRQQDLLDY
QMALEASGYFAQATVRVEPDPARAAAIPIEVTVVERPLKRFSVGAGVSTDTGARVQAAWLHRDILDRGMRLRLESRLETT
RQSGLAELTWPRNTKRYEHSLGLQLRQEEIEGQETHATVLAARRNLLRGKIETNLTLQYQTEEQSVGDAPEVRNQALTAN
YAWTKRAIGRAFYPRRGYVLSLQGGGASEALLSDTSFVRLYGRHIHYLPAGDRGRLVLRGEFGSVLADTRDGIPTDFLFR
AGGDNSVRGYAYQSLGEPVDGGVASVRYLATGSVEYNYFFTRNWGAAVFVDAGDAADSTAALSPVFGYGVGARYRSPVGP
VNVDVAYGEATDEVRLHFSLGVSF

Specific function: Unknown

COG id: COG0729

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0698 [H]

Homologues:

Organism=Escherichia coli, GI1790666, Length=601, Percent_Identity=25.6239600665557, Blast_Score=145, Evalue=5e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 63780; Mature: 63648

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTSTAPAVVPRLLKTLLLLAALHASAARALSVEVQAPEEIAALLREHLETARAARLGEK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHCCCC
PDADEIARLQRKSEETARDLLATEGYFSPRIDSVVTPVGDDWRVSYRVEPGPRTTVRRAV
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCEEEEEEECCCCHHHHHHHH
LRFEGAVARDEARGLRARLARAFAENAGKPFRQAEWEAAKLAVLRLLLANAYLAARIATS
HHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECC
EARVDPAARAADLSVTIDSGPAFHYGAPVVSGTARYPESIVRNLNPAAPGKPVRQQDLLD
HHCCCCCCCCEEEEEEECCCCCEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHH
YQMALEASGYFAQATVRVEPDPARAAAIPIEVTVVERPLKRFSVGAGVSTDTGARVQAAW
HHHHHHCCCEEEEEEEEECCCCCCEEEEEEEEEEEHHHHHHHHCCCCCCCCCCCEEHHHH
LHRDILDRGMRLRLESRLETTRQSGLAELTWPRNTKRYEHSLGLQLRQEEIEGQETHATV
HHHHHHHCCCEEEHHHHHHHHHHCCCEEEECCCCCCHHHHHCCCEEEHHHCCCCHHHHHH
LAARRNLLRGKIETNLTLQYQTEEQSVGDAPEVRNQALTANYAWTKRAIGRAFYPRRGYV
HHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHCCEEEECCHHHHHHHHHCCCCCCCEE
LSLQGGGASEALLSDTSFVRLYGRHIHYLPAGDRGRLVLRGEFGSVLADTRDGIPTDFLF
EEECCCCCCHHHHCCCHHEEEECCEEEEECCCCCCCEEEEECCCCHHHHCCCCCCCHHEE
RAGGDNSVRGYAYQSLGEPVDGGVASVRYLATGSVEYNYFFTRNWGAAVFVDAGDAADST
ECCCCCCCCCHHHHHCCCCCCCCHHEEEEEEECCEEEEEEEEECCCEEEEEECCCCCCCC
AALSPVFGYGVGARYRSPVGPVNVDVAYGEATDEVRLHFSLGVSF
HHCCCHHHCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCC
>Mature Secondary Structure 
PTSTAPAVVPRLLKTLLLLAALHASAARALSVEVQAPEEIAALLREHLETARAARLGEK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHCCCC
PDADEIARLQRKSEETARDLLATEGYFSPRIDSVVTPVGDDWRVSYRVEPGPRTTVRRAV
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCEEEEEEECCCCHHHHHHHH
LRFEGAVARDEARGLRARLARAFAENAGKPFRQAEWEAAKLAVLRLLLANAYLAARIATS
HHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECC
EARVDPAARAADLSVTIDSGPAFHYGAPVVSGTARYPESIVRNLNPAAPGKPVRQQDLLD
HHCCCCCCCCEEEEEEECCCCCEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHH
YQMALEASGYFAQATVRVEPDPARAAAIPIEVTVVERPLKRFSVGAGVSTDTGARVQAAW
HHHHHHCCCEEEEEEEEECCCCCCEEEEEEEEEEEHHHHHHHHCCCCCCCCCCCEEHHHH
LHRDILDRGMRLRLESRLETTRQSGLAELTWPRNTKRYEHSLGLQLRQEEIEGQETHATV
HHHHHHHCCCEEEHHHHHHHHHHCCCEEEECCCCCCHHHHHCCCEEEHHHCCCCHHHHHH
LAARRNLLRGKIETNLTLQYQTEEQSVGDAPEVRNQALTANYAWTKRAIGRAFYPRRGYV
HHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHCCEEEECCHHHHHHHHHCCCCCCCEE
LSLQGGGASEALLSDTSFVRLYGRHIHYLPAGDRGRLVLRGEFGSVLADTRDGIPTDFLF
EEECCCCCCHHHHCCCHHEEEECCEEEEECCCCCCCEEEEECCCCHHHHCCCCCCCHHEE
RAGGDNSVRGYAYQSLGEPVDGGVASVRYLATGSVEYNYFFTRNWGAAVFVDAGDAADST
ECCCCCCCCCHHHHHCCCCCCCCHHEEEEEEECCEEEEEEEEECCCEEEEEECCCCCCCC
AALSPVFGYGVGARYRSPVGPVNVDVAYGEATDEVRLHFSLGVSF
HHCCCHHHCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]