Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316838

Identifier: 74316838

GI number: 74316838

Start: 862180

End: 863709

Strand: Direct

Name: 74316838

Synonym: Tbd_0820

Alternate gene names: NA

Gene position: 862180-863709 (Clockwise)

Preceding gene: 74316837

Following gene: 74316839

Centisome position: 29.63

GC content: 66.54

Gene sequence:

>1530_bases
ATGAGAAAACATCGCGCTGCCGTTCTGGGGATTGTCTGCTCCGGTTTCATGCTGACCGCTTCGGCCGCCGACCCGGCGCG
CCTGTCCGACGGTCGACTCGAGGACGCGGTGGAGGACGTGCAGACGCCGCGCACGCCTGCGGTGACGCGGCCCGAGCAGA
AGCTCAACGCGCACGACCGCTCGGGTGATTTCGTCGCGCCCAGCGCCAAGCCGTCGTCGCCTGCGTTCCGGAACCAGCCT
GACAAGGGCAAGGTGCTCGGCTTCGATTTCGCGCGCGATCCGCTGAACGCGAAGGCGCCGATGCAGACCTTCCAGGAGAC
GATGAAGGCCGACATCGACGCGCTGCCCAAGGTCAAGGCGACTCAGCGCGCGCTGCTCGAGGAGCGCTACAACCTGACGC
CGCGGCTCGACCCGAGCGCGAAAATGTCGCGCGGCAAGCCGCTGCCGGTCGGGCCGACCGCGCGCCTCGCGCGGGGGCTG
AGCTGGGAGAAGCTCGCCGAGATGAAGCCGGAGGAGATCCGCGACCAGGGCGCGTTTCCGTATCCCTCGCTGCCGCACCC
CAAGCAGTCGACGGGCGGCCAGGTCTTCCCGCAGATCCAGATCGACCAGTTCCCGCGGCTGCAGCGTTTCGACGTCGAGT
TCGACCTGCCCGACGCCTTCCTGCCCGAGTTCCCGCCGGCGATCTTTCTGCAGAACCGGCCCGAGCTCGGCGACGTCTCG
CGCGGCGAAGTCGTGTCGATCAACAACTTCCACCGCCTGTTCAAGGATCTCGTGACGCCGGTGCAGCTCGACGGGCTGCG
CCTGCTGGTGACGCCTTTCGCGCAGGAGGAGTTCAACGCGACCGACGACCGCAAGGTCAAGCGCCCGAGCCTCGGCGTCG
CGTGCATGGACTGCCACGTCAACGGCCACACCACGGCGCAGTTCCACCTCAATCCCGACACGCGCCCGCAGGAACGCCGC
ATGCGGCTCGACACGACGAGCCTGCGCGGGCTCTTCAACCAGCAGATCCACGGTTCGAAGCGCAGCCTGCGCTCGGTCGA
GGACTTCACCGAGTTCGAGTTCCGCACGGCCTACTTCAACGGCGACCCGATCCACGCGATGAAGAAGGGGATCACGATCT
TCGACCGCATCCAGGTCAGCCACATGGCGCAGATGCAGAACATGTTCGACTTTCCGCCCGCGCCGAAACTCAGTGCAGAA
GGGCAGCTCGACGCGGCCAAGGCGACGCCGGCCGAATTGCGCGGGCGTGACGTGTTCTTCAACAAGGGCCGTTGCGCCTC
GTGCCACACGCCGCCGGGCTACCTCGACCACCAGATGCACGACCTCAAGCTCGAGCGCTTCGTCAACGAGCCCGGCGACG
GGCCGATGAAGACCTTCACGCTGCGCGGCATCAAGGACAGCCCGCCCTACCTGCACGACGGGCGCCTGCTCACGCTCGAG
GACACGGTTGAATTCTTCAACCTCGTGCTCGGCACGAAGCTGACCAAGGAAGAGAAATCCGATCTCGTGGCCTTCATGCG
CCAGCTCTGA

Upstream 100 bases:

>100_bases
GAATCCCGCGCGGCGCGCGGCTTTCGCGCGCTTGTAAACGCATGCTTGCGCTCTATCGTTCTTAAGGTCGTCCGCCAGGG
TCAACCCGTTCGAGGGTCTT

Downstream 100 bases:

>100_bases
TTTTCGCGCCAGCTGGGCCCTGGCTCGGGGGCCGGGCGGCTACACGCCGCTTCAATAACAGGGAGGGGGAATCATGCCGA
GAACAGCATCGTCGACCGTG

Product: cytochrome c peroxidase

Products: NA

Alternate protein names: Cytochrome C Hsc; Cytochrome C; Cytochrome; Cytochrome C Peroxidase-Like Protein; Cytochrome-C Peroxidase; Cytochrome C Catalase CCC

Number of amino acids: Translated: 509; Mature: 509

Protein sequence:

>509_residues
MRKHRAAVLGIVCSGFMLTASAADPARLSDGRLEDAVEDVQTPRTPAVTRPEQKLNAHDRSGDFVAPSAKPSSPAFRNQP
DKGKVLGFDFARDPLNAKAPMQTFQETMKADIDALPKVKATQRALLEERYNLTPRLDPSAKMSRGKPLPVGPTARLARGL
SWEKLAEMKPEEIRDQGAFPYPSLPHPKQSTGGQVFPQIQIDQFPRLQRFDVEFDLPDAFLPEFPPAIFLQNRPELGDVS
RGEVVSINNFHRLFKDLVTPVQLDGLRLLVTPFAQEEFNATDDRKVKRPSLGVACMDCHVNGHTTAQFHLNPDTRPQERR
MRLDTTSLRGLFNQQIHGSKRSLRSVEDFTEFEFRTAYFNGDPIHAMKKGITIFDRIQVSHMAQMQNMFDFPPAPKLSAE
GQLDAAKATPAELRGRDVFFNKGRCASCHTPPGYLDHQMHDLKLERFVNEPGDGPMKTFTLRGIKDSPPYLHDGRLLTLE
DTVEFFNLVLGTKLTKEEKSDLVAFMRQL

Sequences:

>Translated_509_residues
MRKHRAAVLGIVCSGFMLTASAADPARLSDGRLEDAVEDVQTPRTPAVTRPEQKLNAHDRSGDFVAPSAKPSSPAFRNQP
DKGKVLGFDFARDPLNAKAPMQTFQETMKADIDALPKVKATQRALLEERYNLTPRLDPSAKMSRGKPLPVGPTARLARGL
SWEKLAEMKPEEIRDQGAFPYPSLPHPKQSTGGQVFPQIQIDQFPRLQRFDVEFDLPDAFLPEFPPAIFLQNRPELGDVS
RGEVVSINNFHRLFKDLVTPVQLDGLRLLVTPFAQEEFNATDDRKVKRPSLGVACMDCHVNGHTTAQFHLNPDTRPQERR
MRLDTTSLRGLFNQQIHGSKRSLRSVEDFTEFEFRTAYFNGDPIHAMKKGITIFDRIQVSHMAQMQNMFDFPPAPKLSAE
GQLDAAKATPAELRGRDVFFNKGRCASCHTPPGYLDHQMHDLKLERFVNEPGDGPMKTFTLRGIKDSPPYLHDGRLLTLE
DTVEFFNLVLGTKLTKEEKSDLVAFMRQL
>Mature_509_residues
MRKHRAAVLGIVCSGFMLTASAADPARLSDGRLEDAVEDVQTPRTPAVTRPEQKLNAHDRSGDFVAPSAKPSSPAFRNQP
DKGKVLGFDFARDPLNAKAPMQTFQETMKADIDALPKVKATQRALLEERYNLTPRLDPSAKMSRGKPLPVGPTARLARGL
SWEKLAEMKPEEIRDQGAFPYPSLPHPKQSTGGQVFPQIQIDQFPRLQRFDVEFDLPDAFLPEFPPAIFLQNRPELGDVS
RGEVVSINNFHRLFKDLVTPVQLDGLRLLVTPFAQEEFNATDDRKVKRPSLGVACMDCHVNGHTTAQFHLNPDTRPQERR
MRLDTTSLRGLFNQQIHGSKRSLRSVEDFTEFEFRTAYFNGDPIHAMKKGITIFDRIQVSHMAQMQNMFDFPPAPKLSAE
GQLDAAKATPAELRGRDVFFNKGRCASCHTPPGYLDHQMHDLKLERFVNEPGDGPMKTFTLRGIKDSPPYLHDGRLLTLE
DTVEFFNLVLGTKLTKEEKSDLVAFMRQL

Specific function: Unknown

COG id: COG1858

COG function: function code P; Cytochrome c peroxidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57265; Mature: 57265

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKHRAAVLGIVCSGFMLTASAADPARLSDGRLEDAVEDVQTPRTPAVTRPEQKLNAHDR
CCCHHHHHHHHHHHCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHCCCCC
SGDFVAPSAKPSSPAFRNQPDKGKVLGFDFARDPLNAKAPMQTFQETMKADIDALPKVKA
CCCEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCHHH
TQRALLEERYNLTPRLDPSAKMSRGKPLPVGPTARLARGLSWEKLAEMKPEEIRDQGAFP
HHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHCCCCHHHHHHCCCHHHHHCCCCC
YPSLPHPKQSTGGQVFPQIQIDQFPRLQRFDVEFDLPDAFLPEFPPAIFLQNRPELGDVS
CCCCCCCCCCCCCEECEEEECCCCCCCCCCCEEECCCHHHCCCCCCEEEECCCCCCCCCC
RGEVVSINNFHRLFKDLVTPVQLDGLRLLVTPFAQEEFNATDDRKVKRPSLGVACMDCHV
CCCEEECHHHHHHHHHHCCCEECCCEEEEEECCCHHHCCCCCCCCCCCCCCCEEEEEEEC
NGHTTAQFHLNPDTRPQERRMRLDTTSLRGLFNQQIHGSKRSLRSVEDFTEFEFRTAYFN
CCCEEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEEEEC
GDPIHAMKKGITIFDRIQVSHMAQMQNMFDFPPAPKLSAEGQLDAAKATPAELRGRDVFF
CCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCEEEE
NKGRCASCHTPPGYLDHQMHDLKLERFVNEPGDGPMKTFTLRGIKDSPPYLHDGRLLTLE
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEECCEEEEHH
DTVEFFNLVLGTKLTKEEKSDLVAFMRQL
HHHHHHHHHHCCCCCHHHHHHHHHHHHHC
>Mature Secondary Structure
MRKHRAAVLGIVCSGFMLTASAADPARLSDGRLEDAVEDVQTPRTPAVTRPEQKLNAHDR
CCCHHHHHHHHHHHCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHCCCCC
SGDFVAPSAKPSSPAFRNQPDKGKVLGFDFARDPLNAKAPMQTFQETMKADIDALPKVKA
CCCEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCHHH
TQRALLEERYNLTPRLDPSAKMSRGKPLPVGPTARLARGLSWEKLAEMKPEEIRDQGAFP
HHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHCCCCHHHHHHCCCHHHHHCCCCC
YPSLPHPKQSTGGQVFPQIQIDQFPRLQRFDVEFDLPDAFLPEFPPAIFLQNRPELGDVS
CCCCCCCCCCCCCEECEEEECCCCCCCCCCCEEECCCHHHCCCCCCEEEECCCCCCCCCC
RGEVVSINNFHRLFKDLVTPVQLDGLRLLVTPFAQEEFNATDDRKVKRPSLGVACMDCHV
CCCEEECHHHHHHHHHHCCCEECCCEEEEEECCCHHHCCCCCCCCCCCCCCCEEEEEEEC
NGHTTAQFHLNPDTRPQERRMRLDTTSLRGLFNQQIHGSKRSLRSVEDFTEFEFRTAYFN
CCCEEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEEEEC
GDPIHAMKKGITIFDRIQVSHMAQMQNMFDFPPAPKLSAEGQLDAAKATPAELRGRDVFF
CCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCEEEE
NKGRCASCHTPPGYLDHQMHDLKLERFVNEPGDGPMKTFTLRGIKDSPPYLHDGRLLTLE
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEECCEEEEHH
DTVEFFNLVLGTKLTKEEKSDLVAFMRQL
HHHHHHHHHHCCCCCHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA