Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

Click here to switch to the map view.

The map label for this gene is 74316820

Identifier: 74316820

GI number: 74316820

Start: 843511

End: 844512

Strand: Direct

Name: 74316820

Synonym: Tbd_0802

Alternate gene names: NA

Gene position: 843511-844512 (Clockwise)

Preceding gene: 74316818

Following gene: 74316823

Centisome position: 28.99

GC content: 63.97

Gene sequence:

>1002_bases
ATGCTTTTTCTCGAACTCCTCGGCTATCTGCTGCTCATCCTCGTTGCGGCGGAAATCTTTGTCAACGCGCTCGAGCACCT
AGGGGAAAAACTGCGCATCTCCGAAGGGGTGACCGGTTCGCTGTTCGCCGCGGTCGGCACGGCGATGCCTGAAACGCTCG
TGCCGCTGCTCGCGATTTTCGCCGGCACGGGCAACGCGACGACCAACGAGGAGATCGGCGTCGGCGCGATTCTCGGCGCC
CCGCTGATGCTCTCGACGCTGTCGCTGTTCCTCATGAGCGTCGCTGTGCTCGGACGGCGCGGCCTGCGCGGCCACCTCAC
ACCCGAAAAGACCGGCCTCAAGCGCGATCTCGATTTCTTCCTGATGGCCTTCGTGCTGGCCTTCGTCGCGATGTTCGTGC
CACACACGCAAAGCTGGGCGCGCGGCGCGCTCGCCTTCGTCATGGTGATGATCTACTTTTTCTACGTCATGCTCACCTTG
CGTGCGTCGAGCAAGCTCGTCGACGAGGGCCACGCGACCGAGGCCGGCTCGCCCATGCTGCTGACCCGGCTGGGCATGCC
GCAGAACCTGCTCTTCATCATCGTGCAGCTCGCGCTCGGCCTGGGCTTGCTCGTTGCCGGCGCCAAGGGTTTCATCCACG
GCGTCGAGGCCGCCGCGCCGATCATTGGCATCTCCGCCTTGCTGCTCTCGCTGATGATCATCCCGATCGCCACCGAACTG
CCCGAAAAGGTCAATTCGATCCTGTGGATACGCAAGCACAAGGACACATTGGCCTTCGGCAACATCACCGGCGCGATGGT
GTTCCAGGGCACGCTGCTGCCTGCGATCGGCATCTCGCTGACGCCCTGGGCGCCGCAGAAGGAAGTGCTGCTCGGTGTGC
TGGTCACGCTCGTCGCCGCGTTCTGGCTGCGCTGGGCGGCAGTCACCGGAGGCCTGCGGGTCTGGCACCTGTTCGTGAAC
GGCGCGCTGTACATCACCTATCTCACCGTGGTGCTGGCTTAA

Upstream 100 bases:

>100_bases
TGCGATCCGGTGATGGAAATCGCCCTCAGTGAGGCGTTCGAAAGCGCGGACGGCGGAGGCGCCGCTGGTAGAATCGCGCT
TTCGCTCCGGACGCCCGCCC

Downstream 100 bases:

>100_bases
TCAGCAAACGGCGGGGCGCCCGCCAACCTTCGGCCGGTCAGCGACGAGGCGCGCGCCGTCGCGCGACGCCACCGACCAGG
GCCAGGCCGCTCAGCATCAT

Product: Ca2+/H+ antiporter

Products: NA

Alternate protein names: Ca2+/Na+ Antiporter; Sodium/Calcium Antiporter; Sodium/Calcium Exchanger Protein; Sodium/Calcium Exchanger; Cation Antiporter; Na+/Ca+ Exchanger Protein; Ca2+Cation Antiporter CaCA Family; Sodium/Calcium Exchanger Family Protein; Ca2+/H+ Antiporter

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MLFLELLGYLLLILVAAEIFVNALEHLGEKLRISEGVTGSLFAAVGTAMPETLVPLLAIFAGTGNATTNEEIGVGAILGA
PLMLSTLSLFLMSVAVLGRRGLRGHLTPEKTGLKRDLDFFLMAFVLAFVAMFVPHTQSWARGALAFVMVMIYFFYVMLTL
RASSKLVDEGHATEAGSPMLLTRLGMPQNLLFIIVQLALGLGLLVAGAKGFIHGVEAAAPIIGISALLLSLMIIPIATEL
PEKVNSILWIRKHKDTLAFGNITGAMVFQGTLLPAIGISLTPWAPQKEVLLGVLVTLVAAFWLRWAAVTGGLRVWHLFVN
GALYITYLTVVLA

Sequences:

>Translated_333_residues
MLFLELLGYLLLILVAAEIFVNALEHLGEKLRISEGVTGSLFAAVGTAMPETLVPLLAIFAGTGNATTNEEIGVGAILGA
PLMLSTLSLFLMSVAVLGRRGLRGHLTPEKTGLKRDLDFFLMAFVLAFVAMFVPHTQSWARGALAFVMVMIYFFYVMLTL
RASSKLVDEGHATEAGSPMLLTRLGMPQNLLFIIVQLALGLGLLVAGAKGFIHGVEAAAPIIGISALLLSLMIIPIATEL
PEKVNSILWIRKHKDTLAFGNITGAMVFQGTLLPAIGISLTPWAPQKEVLLGVLVTLVAAFWLRWAAVTGGLRVWHLFVN
GALYITYLTVVLA
>Mature_333_residues
MLFLELLGYLLLILVAAEIFVNALEHLGEKLRISEGVTGSLFAAVGTAMPETLVPLLAIFAGTGNATTNEEIGVGAILGA
PLMLSTLSLFLMSVAVLGRRGLRGHLTPEKTGLKRDLDFFLMAFVLAFVAMFVPHTQSWARGALAFVMVMIYFFYVMLTL
RASSKLVDEGHATEAGSPMLLTRLGMPQNLLFIIVQLALGLGLLVAGAKGFIHGVEAAAPIIGISALLLSLMIIPIATEL
PEKVNSILWIRKHKDTLAFGNITGAMVFQGTLLPAIGISLTPWAPQKEVLLGVLVTLVAAFWLRWAAVTGGLRVWHLFVN
GALYITYLTVVLA

Specific function: Unknown

COG id: COG0530

COG function: function code P; Ca2+/Na+ antiporter

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35719; Mature: 35719

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHC
>Mature Secondary Structure
MLFLELLGYLLLILVAAEIFVNALEHLGEKLRISEGVTGSLFAAVGTAMPETLVPLLAIF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHH
AGTGNATTNEEIGVGAILGAPLMLSTLSLFLMSVAVLGRRGLRGHLTPEKTGLKRDLDFF
HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
LMAFVLAFVAMFVPHTQSWARGALAFVMVMIYFFYVMLTLRASSKLVDEGHATEAGSPML
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
LTRLGMPQNLLFIIVQLALGLGLLVAGAKGFIHGVEAAAPIIGISALLLSLMIIPIATEL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PEKVNSILWIRKHKDTLAFGNITGAMVFQGTLLPAIGISLTPWAPQKEVLLGVLVTLVAA
HHHHHHHEEEEECCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
FWLRWAAVTGGLRVWHLFVNGALYITYLTVVLA
HHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA