| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is pgsA [H]
Identifier: 74316718
GI number: 74316718
Start: 741440
End: 742006
Strand: Reverse
Name: pgsA [H]
Synonym: Tbd_0700
Alternate gene names: 74316718
Gene position: 742006-741440 (Counterclockwise)
Preceding gene: 74316719
Following gene: 74316717
Centisome position: 25.5
GC content: 66.14
Gene sequence:
>567_bases ATGCCGCTCAATCTCCCGAACCTGCTGACCTGGCTGCGCATCCTGTTCATTCCGCTCATGGCGGGGGTGTTCTATCTTCC CGACGGCTGGGTCACGCCGCCCCAGGCGAACCTGCTCGCCGCGCTCTTTTTCGGCGTCGCCGCGCTGACCGACTGGCTCG ACGGGTACCTTGCGCGCGCGCTCGGCCAGACCTCCGCGTTCGGCGCGTTTCTCGATCCGGTCGCCGACAAGCTCATGGTC GCCGCGGCGCTGATCGTGCTGATCGATCTCGACCGCGTCGCGCCGCTGATCGGCCTCATCATCATCGGCCGTGAGATCAC GATCTCGGCGTTGCGCGAATGGATGGCCAAGGCGGGCAAGTCGGCGAGCGTCGCGGTCTCCTTCGTCGGCAAGCTGAAGA CCGCAGGGCAGATGGTCGCCATCGTCCTGCTGCTCTACTTCGCGCCGCTGGCCGGCCTGCCCACGGCCCGGATCGGGACC CTGCTGATCTGGCTGGCCGCCGTCCTCACGTTGATTTCGATGGCCTACTACCTAATGATGGCGGCGCGGGCGCTGCAAAA AACTTGA
Upstream 100 bases:
>100_bases CTGCAGGGCGTGCGCAACGCGGGCGTGGACGCCCTTGCCTCGGTCAACGGTATCAGCCGAGAATTGGCGGAAATCATCTA TAACGCGCTCCATTGACCCG
Downstream 100 bases:
>100_bases GGAAAATCCGCGCCGGCTGTTGACAGAAAATGACGGAATCACCATAATGCGCAGCCTTCAACGCGGGAATAGCTCAGCTG GTAGAGCGCAACCTTGCCAA
Product: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylglycerophosphate synthase; PGP synthase [H]
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MPLNLPNLLTWLRILFIPLMAGVFYLPDGWVTPPQANLLAALFFGVAALTDWLDGYLARALGQTSAFGAFLDPVADKLMV AAALIVLIDLDRVAPLIGLIIIGREITISALREWMAKAGKSASVAVSFVGKLKTAGQMVAIVLLLYFAPLAGLPTARIGT LLIWLAAVLTLISMAYYLMMAARALQKT
Sequences:
>Translated_188_residues MPLNLPNLLTWLRILFIPLMAGVFYLPDGWVTPPQANLLAALFFGVAALTDWLDGYLARALGQTSAFGAFLDPVADKLMV AAALIVLIDLDRVAPLIGLIIIGREITISALREWMAKAGKSASVAVSFVGKLKTAGQMVAIVLLLYFAPLAGLPTARIGT LLIWLAAVLTLISMAYYLMMAARALQKT >Mature_187_residues PLNLPNLLTWLRILFIPLMAGVFYLPDGWVTPPQANLLAALFFGVAALTDWLDGYLARALGQTSAFGAFLDPVADKLMVA AALIVLIDLDRVAPLIGLIIIGREITISALREWMAKAGKSASVAVSFVGKLKTAGQMVAIVLLLYFAPLAGLPTARIGTL LIWLAAVLTLISMAYYLMMAARALQKT
Specific function: This protein catalyzes the committed step to the synthesis of the acidic phospholipids [H]
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Escherichia coli, GI1788220, Length=186, Percent_Identity=50.5376344086022, Blast_Score=149, Evalue=1e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000462 - InterPro: IPR004570 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.5 [H]
Molecular weight: Translated: 20170; Mature: 20039
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLNLPNLLTWLRILFIPLMAGVFYLPDGWVTPPQANLLAALFFGVAALTDWLDGYLARA CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LGQTSAFGAFLDPVADKLMVAAALIVLIDLDRVAPLIGLIIIGREITISALREWMAKAGK HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC SASVAVSFVGKLKTAGQMVAIVLLLYFAPLAGLPTARIGTLLIWLAAVLTLISMAYYLMM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AARALQKT HHHHHHCC >Mature Secondary Structure PLNLPNLLTWLRILFIPLMAGVFYLPDGWVTPPQANLLAALFFGVAALTDWLDGYLARA CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LGQTSAFGAFLDPVADKLMVAAALIVLIDLDRVAPLIGLIIIGREITISALREWMAKAGK HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC SASVAVSFVGKLKTAGQMVAIVLLLYFAPLAGLPTARIGTLLIWLAAVLTLISMAYYLMM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AARALQKT HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]