| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316706
Identifier: 74316706
GI number: 74316706
Start: 728420
End: 729004
Strand: Reverse
Name: 74316706
Synonym: Tbd_0688
Alternate gene names: NA
Gene position: 729004-728420 (Counterclockwise)
Preceding gene: 74316708
Following gene: 74316703
Centisome position: 25.05
GC content: 65.3
Gene sequence:
>585_bases ATGAAGCCCGAACAAAGCCCGCCCATGCGGGCTTTGTTCGGTCCAGACGCCGAAACCTTGTCCGCGTTAGCATCGGCTTC CCGATCGAACGCGCACGAGTATGCCCCCATGAATCCCGCCTCCGCCCAAACGCTCCGCCAACTCCTGCGCACGCAAGAAG TCGCCGCGCTCGGAACGCTCCACGAAGGCCGACCTTACGTGTCGATGGTGCCCTTCGCGACGCTTTCCGGCGGCACCGGC TTCGTCGTTCACGTCAGCCAACTCGCGGCGCACACGAAGGACATGCTGCGAAGCCCACCCGTGAGCCTGCTCGTCGTCGC GCCGCCGGCGCCAGACGTGCTTCCCCAGGCGTTGGCGCGAGTCACGATACAAGGCCGGGCAAGCCAGTACGAGAATGGCA CCGACGCCCACACCGAGGCGAAGGCGACCTACCTGACGCGCTTTCCTGAGAGCGCGGATCTGTTCGGTTTTGCGGACTTC TCCTTGTTCGCGATCGTGCCGGAGTCGGTCCGCTTCGTCGGCGGATTCGCCCAGGCGACGACGATTTCAGCGCAGAAGCT CGCTGAGGTGCTGAGCGCGGCCTGA
Upstream 100 bases:
>100_bases CGACGACAACAATGGTGGATGTAGCTCAGTTGGTAGAGTCCAGGATTGTGATTCCTGTTGTCGTGGGTTCGAGTCCCATC ATCCACCCCACCGTTTCATA
Downstream 100 bases:
>100_bases GCGTCTCCGCCCCGGGCAGGGGCGCCGTCATTCCCGAATTTCGCCGTCGACGTAGAGCCAGTTGCCGTTGACGCGTTCGA AGCGGCTCGTCTCGTGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MKPEQSPPMRALFGPDAETLSALASASRSNAHEYAPMNPASAQTLRQLLRTQEVAALGTLHEGRPYVSMVPFATLSGGTG FVVHVSQLAAHTKDMLRSPPVSLLVVAPPAPDVLPQALARVTIQGRASQYENGTDAHTEAKATYLTRFPESADLFGFADF SLFAIVPESVRFVGGFAQATTISAQKLAEVLSAA
Sequences:
>Translated_194_residues MKPEQSPPMRALFGPDAETLSALASASRSNAHEYAPMNPASAQTLRQLLRTQEVAALGTLHEGRPYVSMVPFATLSGGTG FVVHVSQLAAHTKDMLRSPPVSLLVVAPPAPDVLPQALARVTIQGRASQYENGTDAHTEAKATYLTRFPESADLFGFADF SLFAIVPESVRFVGGFAQATTISAQKLAEVLSAA >Mature_194_residues MKPEQSPPMRALFGPDAETLSALASASRSNAHEYAPMNPASAQTLRQLLRTQEVAALGTLHEGRPYVSMVPFATLSGGTG FVVHVSQLAAHTKDMLRSPPVSLLVVAPPAPDVLPQALARVTIQGRASQYENGTDAHTEAKATYLTRFPESADLFGFADF SLFAIVPESVRFVGGFAQATTISAQKLAEVLSAA
Specific function: Unknown
COG id: COG0748
COG function: function code P; Putative heme iron utilization protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20535; Mature: 20535
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPEQSPPMRALFGPDAETLSALASASRSNAHEYAPMNPASAQTLRQLLRTQEVAALGTL CCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH HEGRPYVSMVPFATLSGGTGFVVHVSQLAAHTKDMLRSPPVSLLVVAPPAPDVLPQALAR CCCCCCEEECCEEEECCCCCCEEEHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH VTIQGRASQYENGTDAHTEAKATYLTRFPESADLFGFADFSLFAIVPESVRFVGGFAQAT HHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCHHHEEECHHHHHHHHCHHHHH TISAQKLAEVLSAA HHHHHHHHHHHHCC >Mature Secondary Structure MKPEQSPPMRALFGPDAETLSALASASRSNAHEYAPMNPASAQTLRQLLRTQEVAALGTL CCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH HEGRPYVSMVPFATLSGGTGFVVHVSQLAAHTKDMLRSPPVSLLVVAPPAPDVLPQALAR CCCCCCEEECCEEEECCCCCCEEEHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH VTIQGRASQYENGTDAHTEAKATYLTRFPESADLFGFADFSLFAIVPESVRFVGGFAQAT HHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCHHHEEECHHHHHHHHCHHHHH TISAQKLAEVLSAA HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA