| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316671
Identifier: 74316671
GI number: 74316671
Start: 694249
End: 694635
Strand: Reverse
Name: 74316671
Synonym: Tbd_0653
Alternate gene names: NA
Gene position: 694635-694249 (Counterclockwise)
Preceding gene: 74316672
Following gene: 74316670
Centisome position: 23.87
GC content: 60.21
Gene sequence:
>387_bases ATGCAAAACTACCGTGACCTCAAGGTCTGGCAGTCGGCAATGGAACTCGCCGAAAGCGTGTACCGAATCACGGGCCCTTT TCCCAGTCATGAGACGTACGGACTTACCGGCCAGTTGCGACGCGCGGCGGTCTCGATTCCTTCGAATCTTGCCGAAGGCC ACGCCCGCAGCACCACGCGCGATTACCTGCGCTTCGTCGGCATCGCGCAAGGATCACTCGCCGAAGCGGAGACGCAGATC GAACTCGTGCACCGCCTCGGTGCCGTCCCAACGGACGACTTGCGAACAATGCTCGAACAAACCAATGAACTCGGAAGGAT GCTGCACGGCCTGCGTAGCGCGCTAACCGCAAAGCTTGCGCCAAGCTCCCTGAACCCTGAATCCTGA
Upstream 100 bases:
>100_bases AGCGATCCCGGATCACGAAGACGTCGTGAAGGCGGTCCTGAAGATGTTCGGGCGCGCCTGACGCGCGCAGGGGTCAGGGG TCGGGATTCAGGGGTCAGGG
Downstream 100 bases:
>100_bases CCCTGAATCTTATGAACCACTACGCCATCACCATGCCGCAGCTCTCGGACACCATGACCGAGGGCGTCGTCGTCACCTGG GAAAAGCAGCCGGGGGACCG
Product: hypothetical protein
Products: NA
Alternate protein names: S23 Ribosomal; 23S Ribosomal Protein; 30S Ribosomal Protein S; 23S Ribosomal RNA Protein; Small Subunit Ribosomal E; Intervening Sequence
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MQNYRDLKVWQSAMELAESVYRITGPFPSHETYGLTGQLRRAAVSIPSNLAEGHARSTTRDYLRFVGIAQGSLAEAETQI ELVHRLGAVPTDDLRTMLEQTNELGRMLHGLRSALTAKLAPSSLNPES
Sequences:
>Translated_128_residues MQNYRDLKVWQSAMELAESVYRITGPFPSHETYGLTGQLRRAAVSIPSNLAEGHARSTTRDYLRFVGIAQGSLAEAETQI ELVHRLGAVPTDDLRTMLEQTNELGRMLHGLRSALTAKLAPSSLNPES >Mature_128_residues MQNYRDLKVWQSAMELAESVYRITGPFPSHETYGLTGQLRRAAVSIPSNLAEGHARSTTRDYLRFVGIAQGSLAEAETQI ELVHRLGAVPTDDLRTMLEQTNELGRMLHGLRSALTAKLAPSSLNPES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14136; Mature: 14136
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNYRDLKVWQSAMELAESVYRITGPFPSHETYGLTGQLRRAAVSIPSNLAEGHARSTTR CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHCCCCHHHH DYLRFVGIAQGSLAEAETQIELVHRLGAVPTDDLRTMLEQTNELGRMLHGLRSALTAKLA HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PSSLNPES CCCCCCCC >Mature Secondary Structure MQNYRDLKVWQSAMELAESVYRITGPFPSHETYGLTGQLRRAAVSIPSNLAEGHARSTTR CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHCCCCHHHH DYLRFVGIAQGSLAEAETQIELVHRLGAVPTDDLRTMLEQTNELGRMLHGLRSALTAKLA HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PSSLNPES CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA