Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316671

Identifier: 74316671

GI number: 74316671

Start: 694249

End: 694635

Strand: Reverse

Name: 74316671

Synonym: Tbd_0653

Alternate gene names: NA

Gene position: 694635-694249 (Counterclockwise)

Preceding gene: 74316672

Following gene: 74316670

Centisome position: 23.87

GC content: 60.21

Gene sequence:

>387_bases
ATGCAAAACTACCGTGACCTCAAGGTCTGGCAGTCGGCAATGGAACTCGCCGAAAGCGTGTACCGAATCACGGGCCCTTT
TCCCAGTCATGAGACGTACGGACTTACCGGCCAGTTGCGACGCGCGGCGGTCTCGATTCCTTCGAATCTTGCCGAAGGCC
ACGCCCGCAGCACCACGCGCGATTACCTGCGCTTCGTCGGCATCGCGCAAGGATCACTCGCCGAAGCGGAGACGCAGATC
GAACTCGTGCACCGCCTCGGTGCCGTCCCAACGGACGACTTGCGAACAATGCTCGAACAAACCAATGAACTCGGAAGGAT
GCTGCACGGCCTGCGTAGCGCGCTAACCGCAAAGCTTGCGCCAAGCTCCCTGAACCCTGAATCCTGA

Upstream 100 bases:

>100_bases
AGCGATCCCGGATCACGAAGACGTCGTGAAGGCGGTCCTGAAGATGTTCGGGCGCGCCTGACGCGCGCAGGGGTCAGGGG
TCGGGATTCAGGGGTCAGGG

Downstream 100 bases:

>100_bases
CCCTGAATCTTATGAACCACTACGCCATCACCATGCCGCAGCTCTCGGACACCATGACCGAGGGCGTCGTCGTCACCTGG
GAAAAGCAGCCGGGGGACCG

Product: hypothetical protein

Products: NA

Alternate protein names: S23 Ribosomal; 23S Ribosomal Protein; 30S Ribosomal Protein S; 23S Ribosomal RNA Protein; Small Subunit Ribosomal E; Intervening Sequence

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MQNYRDLKVWQSAMELAESVYRITGPFPSHETYGLTGQLRRAAVSIPSNLAEGHARSTTRDYLRFVGIAQGSLAEAETQI
ELVHRLGAVPTDDLRTMLEQTNELGRMLHGLRSALTAKLAPSSLNPES

Sequences:

>Translated_128_residues
MQNYRDLKVWQSAMELAESVYRITGPFPSHETYGLTGQLRRAAVSIPSNLAEGHARSTTRDYLRFVGIAQGSLAEAETQI
ELVHRLGAVPTDDLRTMLEQTNELGRMLHGLRSALTAKLAPSSLNPES
>Mature_128_residues
MQNYRDLKVWQSAMELAESVYRITGPFPSHETYGLTGQLRRAAVSIPSNLAEGHARSTTRDYLRFVGIAQGSLAEAETQI
ELVHRLGAVPTDDLRTMLEQTNELGRMLHGLRSALTAKLAPSSLNPES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14136; Mature: 14136

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNYRDLKVWQSAMELAESVYRITGPFPSHETYGLTGQLRRAAVSIPSNLAEGHARSTTR
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHCCCCHHHH
DYLRFVGIAQGSLAEAETQIELVHRLGAVPTDDLRTMLEQTNELGRMLHGLRSALTAKLA
HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PSSLNPES
CCCCCCCC
>Mature Secondary Structure
MQNYRDLKVWQSAMELAESVYRITGPFPSHETYGLTGQLRRAAVSIPSNLAEGHARSTTR
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHCCCCHHHH
DYLRFVGIAQGSLAEAETQIELVHRLGAVPTDDLRTMLEQTNELGRMLHGLRSALTAKLA
HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PSSLNPES
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA