| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is ald [H]
Identifier: 74316662
GI number: 74316662
Start: 682954
End: 684036
Strand: Reverse
Name: ald [H]
Synonym: Tbd_0644
Alternate gene names: 74316662
Gene position: 684036-682954 (Counterclockwise)
Preceding gene: 74316663
Following gene: 74316661
Centisome position: 23.51
GC content: 71.47
Gene sequence:
>1083_bases ATGCACATAGGCATCCCGAAGGAAATCAAGGACCACGAATACCGCGTCGCGCTCACCCCCGAAGGCGCGCGTTCGCTCGT CGATGCCGGCCATGCGGTGAGCGTCGAGAGCCACGCCGGCGCCGCGGTCGGCTTCGGCGACGACGCCTACCGCGCCGCGG GTGCGACCGTCGTGCCGGATGCAGCCGGCGTGTGGGCGGCCGAGCTCGTCGTCAAGGTCAAGGAACCGCAGCCGCAAGAG ACACAGCGGCTCCGGGCGGGGCAGCTGCTTTTCTGCTATCTGCACCTCGCGGCAGCGCCCTCGCTCGCGCGCGAACTCAT GACGCGCGGCGTCAGCGCGATCGCCTACGAAACCGTCGTCGGCCCCGCGGGCGGCCTGCCGCTGTTGCAGCCGATGTCCG ACATCGCGGGCCGGCTCGCCCCGCAGATGGGCGCGCTCGGGCTGCACAGCTCGCACGGCGGCAACGGCAAGCTGATCAGC GGCCTGCCCGGCGTCGCGCCGGCCCACGTCCTCGTCATCGGCGCCGGCGTCGTCGGCATGGCAGCGGTGCGCACAGCGAT CGGCCTCGGTGCACGCGTCACCCTCATCGACCGCCTGCGCGACAAGCTCGCGCAGGCCGAAACCCTGTTCGGCGCGCGCG TCGAGACGCGCTTTTCGTCGCCCGACGCGATCGCCGAATGCGTCGAGCAGGCCGACATCGTGATCGGCGCGGCGCAGATC CCGGGGCGCCACGCGCCCCGCCTGATCAGCCTCGACCTGCTGCGCCGCATGGGCGCCGGCAGCGTGCTCGTCGACGTCGC GATCGACCAGGGCGGCATCGCCGAAACCTCGCGCCCGACCACCCACAGCGACCCTTTCTTCACGGCCGAAGGCGTCGTCC ATTACTGCGTCACCAACATGCCCGGTGCCGTCGCCCGCACCGCAACCGAAGCGCTGACCCACGCGACGCTGCCCTACGTT GAGGCACTCGCCGCGCAAGGCCTCGAAGCGCTCGCCGCCGACCCCGGACTGCACGCCGGGCTGCACGTCCACGCCGGCAA GATCATGCACGCCGGGCTCGCACTCGATCTCAACTTCGACTGA
Upstream 100 bases:
>100_bases CGGCTCAGCCGGATGGCACCCGCGTATTACCGCGTCGAACGCGCCGGGCCGCGCCGCGCGTCCCGTAGTCGAGCCGCAAA CCGAGAGCCAGGAGGACCCC
Downstream 100 bases:
>100_bases GCGGCCGGCCAAGGCTTCGAATTCTTTCCCCCGCCCGGGGAAGCCCCGGCAGTGCGTCGGCCGGACTTGCCGGTCCGACG GGGCGCCTCGTTCCACGCTT
Product: L-alanine dehydrogenase
Products: NA
Alternate protein names: Stage V sporulation protein N [H]
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MHIGIPKEIKDHEYRVALTPEGARSLVDAGHAVSVESHAGAAVGFGDDAYRAAGATVVPDAAGVWAAELVVKVKEPQPQE TQRLRAGQLLFCYLHLAAAPSLARELMTRGVSAIAYETVVGPAGGLPLLQPMSDIAGRLAPQMGALGLHSSHGGNGKLIS GLPGVAPAHVLVIGAGVVGMAAVRTAIGLGARVTLIDRLRDKLAQAETLFGARVETRFSSPDAIAECVEQADIVIGAAQI PGRHAPRLISLDLLRRMGAGSVLVDVAIDQGGIAETSRPTTHSDPFFTAEGVVHYCVTNMPGAVARTATEALTHATLPYV EALAAQGLEALAADPGLHAGLHVHAGKIMHAGLALDLNFD
Sequences:
>Translated_360_residues MHIGIPKEIKDHEYRVALTPEGARSLVDAGHAVSVESHAGAAVGFGDDAYRAAGATVVPDAAGVWAAELVVKVKEPQPQE TQRLRAGQLLFCYLHLAAAPSLARELMTRGVSAIAYETVVGPAGGLPLLQPMSDIAGRLAPQMGALGLHSSHGGNGKLIS GLPGVAPAHVLVIGAGVVGMAAVRTAIGLGARVTLIDRLRDKLAQAETLFGARVETRFSSPDAIAECVEQADIVIGAAQI PGRHAPRLISLDLLRRMGAGSVLVDVAIDQGGIAETSRPTTHSDPFFTAEGVVHYCVTNMPGAVARTATEALTHATLPYV EALAAQGLEALAADPGLHAGLHVHAGKIMHAGLALDLNFD >Mature_360_residues MHIGIPKEIKDHEYRVALTPEGARSLVDAGHAVSVESHAGAAVGFGDDAYRAAGATVVPDAAGVWAAELVVKVKEPQPQE TQRLRAGQLLFCYLHLAAAPSLARELMTRGVSAIAYETVVGPAGGLPLLQPMSDIAGRLAPQMGALGLHSSHGGNGKLIS GLPGVAPAHVLVIGAGVVGMAAVRTAIGLGARVTLIDRLRDKLAQAETLFGARVETRFSSPDAIAECVEQADIVIGAAQI PGRHAPRLISLDLLRRMGAGSVLVDVAIDQGGIAETSRPTTHSDPFFTAEGVVHYCVTNMPGAVARTATEALTHATLPYV EALAAQGLEALAADPGLHAGLHVHAGKIMHAGLALDLNFD
Specific function: This enzyme is a key factor in the assimilation of L- alanine as an energy source through the tricarboxylic acid cycle during sporulation [H]
COG id: COG0686
COG function: function code E; Alanine dehydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AlaDH/PNT family [H]
Homologues:
Organism=Homo sapiens, GI122939155, Length=341, Percent_Identity=32.5513196480938, Blast_Score=142, Evalue=6e-34, Organism=Homo sapiens, GI122939153, Length=341, Percent_Identity=32.5513196480938, Blast_Score=142, Evalue=6e-34, Organism=Escherichia coli, GI1787887, Length=324, Percent_Identity=33.9506172839506, Blast_Score=145, Evalue=6e-36, Organism=Caenorhabditis elegans, GI17550456, Length=337, Percent_Identity=29.080118694362, Blast_Score=120, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007698 - InterPro: IPR008142 - InterPro: IPR008143 - InterPro: IPR007886 - InterPro: IPR008141 [H]
Pfam domain/function: PF01262 AlaDh_PNT_C; PF05222 AlaDh_PNT_N [H]
EC number: =1.4.1.1 [H]
Molecular weight: Translated: 37115; Mature: 37115
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00837 ALADH_PNT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIGIPKEIKDHEYRVALTPEGARSLVDAGHAVSVESHAGAAVGFGDDAYRAAGATVVPD CCCCCCCCCCCCCEEEEECCCHHHHHHCCCCEEEECCCCCEEECCCCHHHHHCCCEECCC AAGVWAAELVVKVKEPQPQETQRLRAGQLLFCYLHLAAAPSLARELMTRGVSAIAYETVV CCCHHHHHHEEEECCCCCHHHHHHHHCHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHC GPAGGLPLLQPMSDIAGRLAPQMGALGLHSSHGGNGKLISGLPGVAPAHVLVIGAGVVGM CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCEEEEEECCHHHH AAVRTAIGLGARVTLIDRLRDKLAQAETLFGARVETRFSSPDAIAECVEQADIVIGAAQI HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHEECCCCHHHHHHHHHHHHEEEEECCC PGRHAPRLISLDLLRRMGAGSVLVDVAIDQGGIAETSRPTTHSDPFFTAEGVVHYCVTNM CCCCCCCEEEHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEHHHHHHHHHHCC PGAVARTATEALTHATLPYVEALAAQGLEALAADPGLHAGLHVHAGKIMHAGLALDLNFD CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCEEEECCCEEECCEEEEECCC >Mature Secondary Structure MHIGIPKEIKDHEYRVALTPEGARSLVDAGHAVSVESHAGAAVGFGDDAYRAAGATVVPD CCCCCCCCCCCCCEEEEECCCHHHHHHCCCCEEEECCCCCEEECCCCHHHHHCCCEECCC AAGVWAAELVVKVKEPQPQETQRLRAGQLLFCYLHLAAAPSLARELMTRGVSAIAYETVV CCCHHHHHHEEEECCCCCHHHHHHHHCHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHC GPAGGLPLLQPMSDIAGRLAPQMGALGLHSSHGGNGKLISGLPGVAPAHVLVIGAGVVGM CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCEEEEEECCHHHH AAVRTAIGLGARVTLIDRLRDKLAQAETLFGARVETRFSSPDAIAECVEQADIVIGAAQI HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHEECCCCHHHHHHHHHHHHEEEEECCC PGRHAPRLISLDLLRRMGAGSVLVDVAIDQGGIAETSRPTTHSDPFFTAEGVVHYCVTNM CCCCCCCEEEHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEHHHHHHHHHHCC PGAVARTATEALTHATLPYVEALAAQGLEALAADPGLHAGLHVHAGKIMHAGLALDLNFD CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCEEEECCCEEECCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8226620; 9384377 [H]