Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316631

Identifier: 74316631

GI number: 74316631

Start: 642695

End: 643363

Strand: Direct

Name: 74316631

Synonym: Tbd_0613

Alternate gene names: NA

Gene position: 642695-643363 (Clockwise)

Preceding gene: 74316628

Following gene: 74316633

Centisome position: 22.09

GC content: 70.7

Gene sequence:

>669_bases
ATGTCCAAGCGATTGTTCGTGTTGCTGGCTCTGTGCGCGTTGCTCCCGGCCGCCCCGGCCGTGGCCGAGGTTCGCACCTT
CGCGCTCGACGGCGACGAGGCCGCCCTGGCGGCCCGGCCGCAGGCGGAGTGGGTCCGGCACGCGCGGGTCTTCGAAAAAC
GCCGCGACTGGGCGGGCCTGTTGGCGTGGGGCGAGAATTGGGCGCGCGGCGACCCCGACAACCCGCTCGCGTGGTTCATA
CAGGGGCGAGCGCTCGCCGAACAGGGTCGCTACCCGGAGGCGATCGAGGCGTATCGGCAAAACCTGCGTCTCGCGCCGGG
TGACGTCTTTGCCCTCAACAACCTCGGCAACGCCTACCGCGACAGCGGCGATTCGCGCGCGGCGATGCTCGCCTATCGCG
CCGCGGCCGAGCGTGCGCCCGACTACGTCGCCGCGTGGCACAACCTCGGGCTCACCTTCTATCTTGCGAAGGGAGACGCG
GGCGTCGCCCGCGCTCTCGACCGGCTGCACGCGACCGACCCGCAGCTCGCGGCCGTGTGGCACGCGCTCGCGCTCGAATA
CGCGATCACGCGCGACGAACGCGTCGCTCGCGACGCGCTGCGCGTGCTGCGCTCATTGAGCCGCGCCGAACGCAAGCGCA
TGTTCGATATCCTGCTCGAAACCGGCTAG

Upstream 100 bases:

>100_bases
GGGCGTTCATTGCGTCATCGATGGAAGTCATGACCGACAGCATAAGCGACGCGTCAAGCGCGGCGTAAAATCAAGCCGAT
CTCCAGGTCCGAGGAAGCTG

Downstream 100 bases:

>100_bases
GGACGCGGGCGTCTTCTCGGCTGCCGCTGCTCGAATTCGGCGACGACCTGGCGCAGGCGGCTCGCTTCGTGCTCCGGCCG
CATCAGCGAACGGCGGCGGC

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MSKRLFVLLALCALLPAAPAVAEVRTFALDGDEAALAARPQAEWVRHARVFEKRRDWAGLLAWGENWARGDPDNPLAWFI
QGRALAEQGRYPEAIEAYRQNLRLAPGDVFALNNLGNAYRDSGDSRAAMLAYRAAAERAPDYVAAWHNLGLTFYLAKGDA
GVARALDRLHATDPQLAAVWHALALEYAITRDERVARDALRVLRSLSRAERKRMFDILLETG

Sequences:

>Translated_222_residues
MSKRLFVLLALCALLPAAPAVAEVRTFALDGDEAALAARPQAEWVRHARVFEKRRDWAGLLAWGENWARGDPDNPLAWFI
QGRALAEQGRYPEAIEAYRQNLRLAPGDVFALNNLGNAYRDSGDSRAAMLAYRAAAERAPDYVAAWHNLGLTFYLAKGDA
GVARALDRLHATDPQLAAVWHALALEYAITRDERVARDALRVLRSLSRAERKRMFDILLETG
>Mature_221_residues
SKRLFVLLALCALLPAAPAVAEVRTFALDGDEAALAARPQAEWVRHARVFEKRRDWAGLLAWGENWARGDPDNPLAWFIQ
GRALAEQGRYPEAIEAYRQNLRLAPGDVFALNNLGNAYRDSGDSRAAMLAYRAAAERAPDYVAAWHNLGLTFYLAKGDAG
VARALDRLHATDPQLAAVWHALALEYAITRDERVARDALRVLRSLSRAERKRMFDILLETG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24721; Mature: 24590

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRLFVLLALCALLPAAPAVAEVRTFALDGDEAALAARPQAEWVRHARVFEKRRDWAGL
CCCHHHHHHHHHHHHCCCCHHHHHHHHEECCCCHHHHCCCHHHHHHHHHHHHHHHHHHHH
LAWGENWARGDPDNPLAWFIQGRALAEQGRYPEAIEAYRQNLRLAPGDVFALNNLGNAYR
HHHCCCCCCCCCCCCCEEEEECHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEHHCCHHHH
DSGDSRAAMLAYRAAAERAPDYVAAWHNLGLTFYLAKGDAGVARALDRLHATDPQLAAVW
CCCCCHHHHHHHHHHHHHCCHHHHHHHHCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHH
HALALEYAITRDERVARDALRVLRSLSRAERKRMFDILLETG
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SKRLFVLLALCALLPAAPAVAEVRTFALDGDEAALAARPQAEWVRHARVFEKRRDWAGL
CCHHHHHHHHHHHHCCCCHHHHHHHHEECCCCHHHHCCCHHHHHHHHHHHHHHHHHHHH
LAWGENWARGDPDNPLAWFIQGRALAEQGRYPEAIEAYRQNLRLAPGDVFALNNLGNAYR
HHHCCCCCCCCCCCCCEEEEECHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEHHCCHHHH
DSGDSRAAMLAYRAAAERAPDYVAAWHNLGLTFYLAKGDAGVARALDRLHATDPQLAAVW
CCCCCHHHHHHHHHHHHHCCHHHHHHHHCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHH
HALALEYAITRDERVARDALRVLRSLSRAERKRMFDILLETG
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA