| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is engA
Identifier: 74316616
GI number: 74316616
Start: 626825
End: 628234
Strand: Direct
Name: engA
Synonym: Tbd_0598
Alternate gene names: 74316616
Gene position: 626825-628234 (Clockwise)
Preceding gene: 74316615
Following gene: 74316619
Centisome position: 21.54
GC content: 66.45
Gene sequence:
>1410_bases ATGCTTCCCACTCTGGTTCTTGTCGGACGCCCGAACGTCGGCAAGTCCACGCTCTTCAATCGCCTGACCGGCACCCGCGA CGCGCTCGTCCATGACCTGCCGGGCATGACGCGCGACCGCCACTACGGTCGCGGCCGCATCGGCGGCAAGCCCTATCTCG TGGTCGACACGGGCGGTCTCGAACCGGTCGTCAAGGATGGCATCCTGGCCGAGATGGCGCGCCAGACGCTGCAGGCCATC GACGAAGCCGACGCGATCATCTTCATGGTCGACGCGCGCGCCGGCGTGACCCCGCAGGACAAGGTCATCGCCGACCGACT GCGCCGCGTGACGTCGCCGGTCCTGCTCGCGGTCAACAAGGCCGAAGGCATGAATCGCGCCGTGGTGACCGCCGAGTTCC ACGAACTCGGCCTCGGCGAGCCGCTCGCGATCTCGGGCGCGCACGGCGACGGCATCGCCGACCTCGTGGCCGAGGCGCTG GCGCCCTTCCCCGAAGAGGAAGAGGCGAGCGACGATTTCGGCGTGCCCAAGATCGCGCTGGTCGGCCGACCCAACGTCGG CAAGTCGACGCTCGTCAACGCGCTGGTCGGCGCGGAGCGCGTGATCGCCTTCGACCAGCCGGGAACGACGCGCGACTCGA TCTACGTCGACTTCGAGCGGGGCGGCAAGCCCTATGTCCTCATCGACACCGCGGGCGTCCGTCGCCGCGGCAAGGTGTTC GAGACCGTGGAAAAATTCTCGGTCATCAAGACCCTGCAGGCGATTGAGGACGCCAACGTCGTGGTGCTCGTGCTCGACGC GCGCGAGAACATTTCCGAGCAGGACGCGCATCTCGCGGGCTTCGTGCTCGAAACCGGGCGCGCGCTGGTCGTCGCGATCA ACAAGTGGGACGGTCTCTCGGCCGAACAGCGCGACGACGTCAAGCGCGACATCGGACGCAAGCTCGCTTTCCTCGACTTT GCGCGCTTCAATTACATCTCTGCGCTCAAGGCGAAGGGCCTGGAGAACCTGCTCAAGGATATCGAGGCCGCACACGCCGC GGCCTTCATCAAGCTGTCGACGCCCAAGCTCACGCGCGTGCTCGAAATGGCCGTCGAACAGCATGCGCCGCCGAAGAACG GGCTGTTCCGTCCGAAGCCGCGCTACGCGCATCAGGGCGGCAAGAACCCACCCGTCATCGTGCTGCACGGCAACGCGCTC GAAGGGCTGCGCGACGACTACAAGCGCTATCTCGAAAGCAGCTTCCGCAAGGCGTTCAAGCTGCAGGGCACGCCGCTCCG AATCCAGATCAAGGAGGACGAGGGCAAGAATCCGTTCGAAGGCAAGAAGCGCGCGCCGCTCAGCGAAAGCGAGGCGACGC GGATGCGGCGCAAGAAGCGCGTACGGCGCAAGGTCTACGGCGCCGACTGA
Upstream 100 bases:
>100_bases CGCGGTGCAGACGAGCGACGGCAGCGTCGTCGCGTTCAGGCTGCAATAGCGAGGTTCACACGGCCGCCGGTGCGCCGGCC GGCATGCTACAAGGACAGCC
Downstream 100 bases:
>100_bases ACGCCGTCAGCGCTGGCGGGCCGGGGCGCAGCCGTGCTCAGGCTCAGTCCAGCCAACGCACTAGGTAAAACAGCCTGAAC CCTTCGGACGAGCGCGACGG
Product: GTP-binding protein EngA
Products: NA
Alternate protein names: GTP-binding protein EngA
Number of amino acids: Translated: 469; Mature: 469
Protein sequence:
>469_residues MLPTLVLVGRPNVGKSTLFNRLTGTRDALVHDLPGMTRDRHYGRGRIGGKPYLVVDTGGLEPVVKDGILAEMARQTLQAI DEADAIIFMVDARAGVTPQDKVIADRLRRVTSPVLLAVNKAEGMNRAVVTAEFHELGLGEPLAISGAHGDGIADLVAEAL APFPEEEEASDDFGVPKIALVGRPNVGKSTLVNALVGAERVIAFDQPGTTRDSIYVDFERGGKPYVLIDTAGVRRRGKVF ETVEKFSVIKTLQAIEDANVVVLVLDARENISEQDAHLAGFVLETGRALVVAINKWDGLSAEQRDDVKRDIGRKLAFLDF ARFNYISALKAKGLENLLKDIEAAHAAAFIKLSTPKLTRVLEMAVEQHAPPKNGLFRPKPRYAHQGGKNPPVIVLHGNAL EGLRDDYKRYLESSFRKAFKLQGTPLRIQIKEDEGKNPFEGKKRAPLSESEATRMRRKKRVRRKVYGAD
Sequences:
>Translated_469_residues MLPTLVLVGRPNVGKSTLFNRLTGTRDALVHDLPGMTRDRHYGRGRIGGKPYLVVDTGGLEPVVKDGILAEMARQTLQAI DEADAIIFMVDARAGVTPQDKVIADRLRRVTSPVLLAVNKAEGMNRAVVTAEFHELGLGEPLAISGAHGDGIADLVAEAL APFPEEEEASDDFGVPKIALVGRPNVGKSTLVNALVGAERVIAFDQPGTTRDSIYVDFERGGKPYVLIDTAGVRRRGKVF ETVEKFSVIKTLQAIEDANVVVLVLDARENISEQDAHLAGFVLETGRALVVAINKWDGLSAEQRDDVKRDIGRKLAFLDF ARFNYISALKAKGLENLLKDIEAAHAAAFIKLSTPKLTRVLEMAVEQHAPPKNGLFRPKPRYAHQGGKNPPVIVLHGNAL EGLRDDYKRYLESSFRKAFKLQGTPLRIQIKEDEGKNPFEGKKRAPLSESEATRMRRKKRVRRKVYGAD >Mature_469_residues MLPTLVLVGRPNVGKSTLFNRLTGTRDALVHDLPGMTRDRHYGRGRIGGKPYLVVDTGGLEPVVKDGILAEMARQTLQAI DEADAIIFMVDARAGVTPQDKVIADRLRRVTSPVLLAVNKAEGMNRAVVTAEFHELGLGEPLAISGAHGDGIADLVAEAL APFPEEEEASDDFGVPKIALVGRPNVGKSTLVNALVGAERVIAFDQPGTTRDSIYVDFERGGKPYVLIDTAGVRRRGKVF ETVEKFSVIKTLQAIEDANVVVLVLDARENISEQDAHLAGFVLETGRALVVAINKWDGLSAEQRDDVKRDIGRKLAFLDF ARFNYISALKAKGLENLLKDIEAAHAAAFIKLSTPKLTRVLEMAVEQHAPPKNGLFRPKPRYAHQGGKNPPVIVLHGNAL EGLRDDYKRYLESSFRKAFKLQGTPLRIQIKEDEGKNPFEGKKRAPLSESEATRMRRKKRVRRKVYGAD
Specific function: GTPase that plays an essential role in the late steps of ribosome biogenesis
COG id: COG1160
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH-like domain
Homologues:
Organism=Escherichia coli, GI87082120, Length=493, Percent_Identity=50.709939148073, Blast_Score=482, Evalue=1e-137, Organism=Escherichia coli, GI1788919, Length=174, Percent_Identity=31.6091954022989, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI2367268, Length=90, Percent_Identity=41.1111111111111, Blast_Score=68, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6323665, Length=175, Percent_Identity=28, Blast_Score=64, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DER_THIDA (Q3SL66)
Other databases:
- EMBL: CP000116 - RefSeq: YP_314356.1 - HSSP: O57939 - ProteinModelPortal: Q3SL66 - SMR: Q3SL66 - STRING: Q3SL66 - GeneID: 3673708 - GenomeReviews: CP000116_GR - KEGG: tbd:Tbd_0598 - NMPDR: fig|292415.3.peg.443 - eggNOG: COG1160 - HOGENOM: HBG592135 - OMA: TRDRTYQ - PhylomeDB: Q3SL66 - ProtClustDB: PRK00093 - BioCyc: TDEN292415:TBD_0598-MONOMER - GO: GO:0005622 - HAMAP: MF_00195 - InterPro: IPR003593 - InterPro: IPR016484 - InterPro: IPR006073 - InterPro: IPR015946 - InterPro: IPR002917 - InterPro: IPR005225 - Gene3D: G3DSA:3.30.300.20 - PIRSF: PIRSF006485 - PRINTS: PR00326 - SMART: SM00382 - TIGRFAMs: TIGR03594 - TIGRFAMs: TIGR00231
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 51482; Mature: 51482
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPTLVLVGRPNVGKSTLFNRLTGTRDALVHDLPGMTRDRHYGRGRIGGKPYLVVDTGGL CCCCEEEEECCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCC EPVVKDGILAEMARQTLQAIDEADAIIFMVDARAGVTPQDKVIADRLRRVTSPVLLAVNK CHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEC AEGMNRAVVTAEFHELGLGEPLAISGAHGDGIADLVAEALAPFPEEEEASDDFGVPKIAL CCCCCEEEEEEEHHHCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEE VGRPNVGKSTLVNALVGAERVIAFDQPGTTRDSIYVDFERGGKPYVLIDTAGVRRRGKVF ECCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCHHH ETVEKFSVIKTLQAIEDANVVVLVLDARENISEQDAHLAGFVLETGRALVVAINKWDGLS HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHEECCCEEEEEEECCCCCC AEQRDDVKRDIGRKLAFLDFARFNYISALKAKGLENLLKDIEAAHAAAFIKLSTPKLTRV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHH LEMAVEQHAPPKNGLFRPKPRYAHQGGKNPPVIVLHGNALEGLRDDYKRYLESSFRKAFK HHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH LQGTPLRIQIKEDEGKNPFEGKKRAPLSESEATRMRRKKRVRRKVYGAD CCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLPTLVLVGRPNVGKSTLFNRLTGTRDALVHDLPGMTRDRHYGRGRIGGKPYLVVDTGGL CCCCEEEEECCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCC EPVVKDGILAEMARQTLQAIDEADAIIFMVDARAGVTPQDKVIADRLRRVTSPVLLAVNK CHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEC AEGMNRAVVTAEFHELGLGEPLAISGAHGDGIADLVAEALAPFPEEEEASDDFGVPKIAL CCCCCEEEEEEEHHHCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEE VGRPNVGKSTLVNALVGAERVIAFDQPGTTRDSIYVDFERGGKPYVLIDTAGVRRRGKVF ECCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCHHH ETVEKFSVIKTLQAIEDANVVVLVLDARENISEQDAHLAGFVLETGRALVVAINKWDGLS HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHEECCCEEEEEEECCCCCC AEQRDDVKRDIGRKLAFLDFARFNYISALKAKGLENLLKDIEAAHAAAFIKLSTPKLTRV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHH LEMAVEQHAPPKNGLFRPKPRYAHQGGKNPPVIVLHGNALEGLRDDYKRYLESSFRKAFK HHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH LQGTPLRIQIKEDEGKNPFEGKKRAPLSESEATRMRRKKRVRRKVYGAD CCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA