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The map label for this gene is rodZ [H]

Identifier: 74316611

GI number: 74316611

Start: 621593

End: 622468

Strand: Direct

Name: rodZ [H]

Synonym: Tbd_0593

Alternate gene names: 74316611

Gene position: 621593-622468 (Clockwise)

Preceding gene: 74316610

Following gene: 74316612

Centisome position: 21.36

GC content: 70.66

Gene sequence:

>876_bases
ATGAACGGCGAGGTCCAACTGACCGTCGGGCAGACGCTGCGCGAAGCGCGCGAGGCGAGCGGCATGACGCTCGACGAGGC
GTCCGCCCGGCTGCGGCTCATGCACCGTCAGGTCGAGGCCATGGAGGCCGACGATTTCGAGGCGCTCGGTCAGCCCGTGT
TTGCGCGCGGTTTCGTGCGCAACTATGCGCGGCTGCTCGGTCTCGCGCCGGAGACGCTGCTGGCGTCGATGGAAGGCGCG
CCGGCAGCGCCTGCGGAGGTCAGCTATGCGAAGCCGCCGCTCCAGCGTCCCTGGTTCGCTTCGTCCTGGGTGATCCTCCT
GGCGCTGGTCGTGCTCGTCGTGCTGGCCGTCCCGGTCGGGCTCTACCTCTGGCTCAACAGCGACGTCGAGGAGGGCGGCC
AGCGTCAGGTGGCGGTGTCGCAGCCGACCACTGCGGGTGCCGCGCCATCGAGTGCTCCGCCCGCCACGCGCGGCGAGGCG
CCCGCCGAAACGCCGGGCGCGCCGAATGCCCCCGCCCCGGTTGAGGGAAACGGCGCGACGGACGGCACCACTGCAGACGG
CACCGTCGCGGTCCCGCCTCAGTCACCGCCTGATGAAGCGGCGGAAGACGCCGGCTCCACCACCGAGGCAAGCACGGGCG
GCGCCGCGCTGCATCTCGAATTCGGCGCCGAAGCCTGGGCCGAGATCAAGGATGCGACGGGGCGAGCCGTGCTTCGTCAG
CTCAACCCGGCGGGCAGCAGCGTCGAGGTAAAGGGCGAGCCGCCGTTCAAGCTCGTGATCGGCAACGCGGCGGAGACGCG
CCTGACCTACAACGGTCGCCCCGTCGATTTGAAACCCCATACCGGCATGACGGTCGCCCGCTTCACGCTCGAATAG

Upstream 100 bases:

>100_bases
GTCTAGGGGATCGCGCGCAGGCGGCGGCCTACGGCTTGCAACTGCGCAAGCGCTTCCCCGAGTCCGAGGAAGCACGCCTG
CTGCAGGCGGGGCAGTACGA

Downstream 100 bases:

>100_bases
ATTCCCCAGATGACGACTCAAATTGTCCGCCGCACCACCCGTCAGGTGCGGATCGGCCCGATATGCGTAGGCGGCGACGC
GCCGGTGGCGGTGCAGTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MNGEVQLTVGQTLREAREASGMTLDEASARLRLMHRQVEAMEADDFEALGQPVFARGFVRNYARLLGLAPETLLASMEGA
PAAPAEVSYAKPPLQRPWFASSWVILLALVVLVVLAVPVGLYLWLNSDVEEGGQRQVAVSQPTTAGAAPSSAPPATRGEA
PAETPGAPNAPAPVEGNGATDGTTADGTVAVPPQSPPDEAAEDAGSTTEASTGGAALHLEFGAEAWAEIKDATGRAVLRQ
LNPAGSSVEVKGEPPFKLVIGNAAETRLTYNGRPVDLKPHTGMTVARFTLE

Sequences:

>Translated_291_residues
MNGEVQLTVGQTLREAREASGMTLDEASARLRLMHRQVEAMEADDFEALGQPVFARGFVRNYARLLGLAPETLLASMEGA
PAAPAEVSYAKPPLQRPWFASSWVILLALVVLVVLAVPVGLYLWLNSDVEEGGQRQVAVSQPTTAGAAPSSAPPATRGEA
PAETPGAPNAPAPVEGNGATDGTTADGTVAVPPQSPPDEAAEDAGSTTEASTGGAALHLEFGAEAWAEIKDATGRAVLRQ
LNPAGSSVEVKGEPPFKLVIGNAAETRLTYNGRPVDLKPHTGMTVARFTLE
>Mature_291_residues
MNGEVQLTVGQTLREAREASGMTLDEASARLRLMHRQVEAMEADDFEALGQPVFARGFVRNYARLLGLAPETLLASMEGA
PAAPAEVSYAKPPLQRPWFASSWVILLALVVLVVLAVPVGLYLWLNSDVEEGGQRQVAVSQPTTAGAAPSSAPPATRGEA
PAETPGAPNAPAPVEGNGATDGTTADGTVAVPPQSPPDEAAEDAGSTTEASTGGAALHLEFGAEAWAEIKDATGRAVLRQ
LNPAGSSVEVKGEPPFKLVIGNAAETRLTYNGRPVDLKPHTGMTVARFTLE

Specific function: Cytoskeletal protein that is involved in cell-shape control through regulation of the length of the long axis [H]

COG id: COG1426

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein. Note=Forms helical filaments along the long axis of the cell (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788864, Length=330, Percent_Identity=27.5757575757576, Blast_Score=88, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 30250; Mature: 30250

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGEVQLTVGQTLREAREASGMTLDEASARLRLMHRQVEAMEADDFEALGQPVFARGFVR
CCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHH
NYARLLGLAPETLLASMEGAPAAPAEVSYAKPPLQRPWFASSWVILLALVVLVVLAVPVG
HHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LYLWLNSDVEEGGQRQVAVSQPTTAGAAPSSAPPATRGEAPAETPGAPNAPAPVEGNGAT
EEEEECCCHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DGTTADGTVAVPPQSPPDEAAEDAGSTTEASTGGAALHLEFGAEAWAEIKDATGRAVLRQ
CCCCCCCEEECCCCCCCHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
LNPAGSSVEVKGEPPFKLVIGNAAETRLTYNGRPVDLKPHTGMTVARFTLE
CCCCCCEEEECCCCCEEEEECCCCCEEEEECCEEEEECCCCCCEEEEEEEC
>Mature Secondary Structure
MNGEVQLTVGQTLREAREASGMTLDEASARLRLMHRQVEAMEADDFEALGQPVFARGFVR
CCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHH
NYARLLGLAPETLLASMEGAPAAPAEVSYAKPPLQRPWFASSWVILLALVVLVVLAVPVG
HHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LYLWLNSDVEEGGQRQVAVSQPTTAGAAPSSAPPATRGEAPAETPGAPNAPAPVEGNGAT
EEEEECCCHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DGTTADGTVAVPPQSPPDEAAEDAGSTTEASTGGAALHLEFGAEAWAEIKDATGRAVLRQ
CCCCCCCEEECCCCCCCHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
LNPAGSSVEVKGEPPFKLVIGNAAETRLTYNGRPVDLKPHTGMTVARFTLE
CCCCCCEEEECCCCCEEEEECCCCCEEEEECCEEEEECCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA