| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316596
Identifier: 74316596
GI number: 74316596
Start: 608658
End: 609098
Strand: Reverse
Name: 74316596
Synonym: Tbd_0578
Alternate gene names: NA
Gene position: 609098-608658 (Counterclockwise)
Preceding gene: 74316597
Following gene: 74316595
Centisome position: 20.93
GC content: 68.71
Gene sequence:
>441_bases ATGAGCGACGACCCCTTGCTGGACAAGATGGACGCCCTCCTCAAGAAACATCGCGGCGCCGGCGAGTCGGCTCATCTCGG CCCGCCGGCAGCCGCGCCCGCTCCCGGCCAGCCCCCGGCCTGGCTTCCCGTCCTCACCGACGTGATCGAACGCGGAACGC CGCCCGCGGCGACCGAGGCCGCGCCGCAGCCGCCCGCGCCCGCCGTAGAAAGCGATGCGCCGCAAGCCCCGGCGGCCAGC GATGCGCTCGCCGAACAACTGATGAGCGAACTCGCGCCGCGCCTGTCGGAAGTGATGGAGAAGCAGGTCGCTGCCGAGCT GCGCAAGAACATCGACGAGACGGTCACCAATCTGTTGTCTCAGCTCGACGTCAACATGCGCGAGATCGTGCGCGAAGCGG TCGCCGAAAAACTAAAGCAACCGCGCAAGCCGGCGAGCTGA
Upstream 100 bases:
>100_bases GAGCGCGAACAGGGCCGCGCGCGCTATCGCTTCTATCAGTCGCGCGGCTACGCGCTGAAGACGCACGATCTGCGCCAGCA GAGCGAGGGATGAGAAAACG
Downstream 100 bases:
>100_bases AACGCCTGACGCTTGTCGAAATCGCGCGCGGCCTGCCGCCGCCTCCGCATTTCGGGGCTTGTCCCGGCATTTTTTGGGAT AATGCCGCCTTTGCGCGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MSDDPLLDKMDALLKKHRGAGESAHLGPPAAAPAPGQPPAWLPVLTDVIERGTPPAATEAAPQPPAPAVESDAPQAPAAS DALAEQLMSELAPRLSEVMEKQVAAELRKNIDETVTNLLSQLDVNMREIVREAVAEKLKQPRKPAS
Sequences:
>Translated_146_residues MSDDPLLDKMDALLKKHRGAGESAHLGPPAAAPAPGQPPAWLPVLTDVIERGTPPAATEAAPQPPAPAVESDAPQAPAAS DALAEQLMSELAPRLSEVMEKQVAAELRKNIDETVTNLLSQLDVNMREIVREAVAEKLKQPRKPAS >Mature_145_residues SDDPLLDKMDALLKKHRGAGESAHLGPPAAAPAPGQPPAWLPVLTDVIERGTPPAATEAAPQPPAPAVESDAPQAPAASD ALAEQLMSELAPRLSEVMEKQVAAELRKNIDETVTNLLSQLDVNMREIVREAVAEKLKQPRKPAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15430; Mature: 15298
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDDPLLDKMDALLKKHRGAGESAHLGPPAAAPAPGQPPAWLPVLTDVIERGTPPAATEA CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC APQPPAPAVESDAPQAPAASDALAEQLMSELAPRLSEVMEKQVAAELRKNIDETVTNLLS CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLDVNMREIVREAVAEKLKQPRKPAS HHCCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SDDPLLDKMDALLKKHRGAGESAHLGPPAAAPAPGQPPAWLPVLTDVIERGTPPAATEA CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC APQPPAPAVESDAPQAPAASDALAEQLMSELAPRLSEVMEKQVAAELRKNIDETVTNLLS CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLDVNMREIVREAVAEKLKQPRKPAS HHCCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA