Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316594

Identifier: 74316594

GI number: 74316594

Start: 604484

End: 605686

Strand: Direct

Name: 74316594

Synonym: Tbd_0576

Alternate gene names: NA

Gene position: 604484-605686 (Clockwise)

Preceding gene: 74316593

Following gene: 74316599

Centisome position: 20.77

GC content: 58.1

Gene sequence:

>1203_bases
ATGAAATTCACACGCGTATTCGCATTCATGGCGCTGGCTGGTCTGGCCGGCAGCGCCTTCGCTACCAATGGCTACTTCTC
GCACGGCTACGGCATGAAGGCCAAGGGCATGGCCGGCGCCGCCACCACCAACACCGACGACGCCTTCGGCGGTGCCAACA
ACCCCGCTGCGATGGCTTTCGCAGGTAACCGTCTCGATCTGGGCGTGGACCTGTTCAGCCCGCGCCGCGAAGCAAGCATG
AGCGTTCCCGGCGTGTCGGTTAAGAGCGACTCCAACTACTTCCTGATCCCGGAATTCGGCTACACGCACCAGATGAGCAA
CGATCTGGCGCTGGGCGTGACCGTGGTGGGTAACGGTGGCATGAACACCAATTACCCGACCAACCTGTATGGTGGTAACG
GGAAACTCGGTATCGATCTGATGCAGTTGATTGTCGCTCCGACCGTTGCCTACAAGGTTGCGCCGAATCACTCCATCGGT
ATTTCCCCGCTGCTGGGCTATCAGCGTTTCAAGGCTGAGGGCTTGGTTAACCCAAATACCGGAACCCCCATCCCCAACGC
AGGATACGACGATTCTTTCGGCTACGGCGTGCGTGTCGGGTACCTGGGTAAGATCACACCGACGGTTACAATTGGTGCGG
CTTATGCCAGCAAGATGAATTTCGACGAGTTTAGCAAGTACAACTGGTTGTTCCTGGAAAACGGCGACTTCGACATTCCC
GAGAACTACAACCTTGGCGCGTCGTGGCAGGCGACTTCTGCGCTCAGGCTGGCGCTGGACTATCAGCGCATCAATTACTC
GGGCGTAAAGGCAGTTGGTGCAGCGCCTTCGGCTGGTGGCTTCGGCTACGATGACGTCAATGTCGTGAAGCTTGGTGCCG
AGTACAAGCTCAACTCGGCATGGACCCTGCGCGCAGGCTACAGCCATACCAACAACCCGATCAAGGGTGCAACCGCTACC
GAGTGCGGTGCGGGTTCTGTGAACTGCGGCGAGGTGACCACCAATATCCTGGCTCCTGCCGTGATCAAAGATCACGCCAC
GCTGGGCTTCACCTACACGCTGGCTTCCGGCAACGAACTGACCATGGCTTACATGCATGCCTTCGAGAACGACGTATCCG
GCTATAACGGCAACAGCGGCGGCACTGATACCATCCGCATGTACCAGGATTCGCTGGGCGTCCAGTACAGCTGGAAGATG
TAA

Upstream 100 bases:

>100_bases
TGGGGTGGCTGGCTTGTCTAAGCGCTAGAGCACGCGTAGCCTTCCGGGTAGGTCATACAACAAGTTGATCTGTAGTAATT
CCGCCCATAAGGAGACATCA

Downstream 100 bases:

>100_bases
TTACCACCAGCTTTGCGCTGTCTGAAAGCCGGGGTCGTGAGACCCCGGCTTTTTTTAGCTTTATTGACCCGGTTCGTTGT
AAAAACGCGGCTTCTGCCAC

Product: putative long-chain fatty acid transport protein

Products: NA

Alternate protein names: Aromatic Hydrocarbon Degradation Membrane Protein; Transporter Protein; Fatty Acid And Hydrocarbon Transporter; Fatty Acid/Hydrocarbon Transporter; Long-Chain Fatty Acid ABC Transporter

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MKFTRVFAFMALAGLAGSAFATNGYFSHGYGMKAKGMAGAATTNTDDAFGGANNPAAMAFAGNRLDLGVDLFSPRREASM
SVPGVSVKSDSNYFLIPEFGYTHQMSNDLALGVTVVGNGGMNTNYPTNLYGGNGKLGIDLMQLIVAPTVAYKVAPNHSIG
ISPLLGYQRFKAEGLVNPNTGTPIPNAGYDDSFGYGVRVGYLGKITPTVTIGAAYASKMNFDEFSKYNWLFLENGDFDIP
ENYNLGASWQATSALRLALDYQRINYSGVKAVGAAPSAGGFGYDDVNVVKLGAEYKLNSAWTLRAGYSHTNNPIKGATAT
ECGAGSVNCGEVTTNILAPAVIKDHATLGFTYTLASGNELTMAYMHAFENDVSGYNGNSGGTDTIRMYQDSLGVQYSWKM

Sequences:

>Translated_400_residues
MKFTRVFAFMALAGLAGSAFATNGYFSHGYGMKAKGMAGAATTNTDDAFGGANNPAAMAFAGNRLDLGVDLFSPRREASM
SVPGVSVKSDSNYFLIPEFGYTHQMSNDLALGVTVVGNGGMNTNYPTNLYGGNGKLGIDLMQLIVAPTVAYKVAPNHSIG
ISPLLGYQRFKAEGLVNPNTGTPIPNAGYDDSFGYGVRVGYLGKITPTVTIGAAYASKMNFDEFSKYNWLFLENGDFDIP
ENYNLGASWQATSALRLALDYQRINYSGVKAVGAAPSAGGFGYDDVNVVKLGAEYKLNSAWTLRAGYSHTNNPIKGATAT
ECGAGSVNCGEVTTNILAPAVIKDHATLGFTYTLASGNELTMAYMHAFENDVSGYNGNSGGTDTIRMYQDSLGVQYSWKM
>Mature_400_residues
MKFTRVFAFMALAGLAGSAFATNGYFSHGYGMKAKGMAGAATTNTDDAFGGANNPAAMAFAGNRLDLGVDLFSPRREASM
SVPGVSVKSDSNYFLIPEFGYTHQMSNDLALGVTVVGNGGMNTNYPTNLYGGNGKLGIDLMQLIVAPTVAYKVAPNHSIG
ISPLLGYQRFKAEGLVNPNTGTPIPNAGYDDSFGYGVRVGYLGKITPTVTIGAAYASKMNFDEFSKYNWLFLENGDFDIP
ENYNLGASWQATSALRLALDYQRINYSGVKAVGAAPSAGGFGYDDVNVVKLGAEYKLNSAWTLRAGYSHTNNPIKGATAT
ECGAGSVNCGEVTTNILAPAVIKDHATLGFTYTLASGNELTMAYMHAFENDVSGYNGNSGGTDTIRMYQDSLGVQYSWKM

Specific function: Unknown

COG id: COG2067

COG function: function code I; Long-chain fatty acid transport protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42395; Mature: 42395

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFTRVFAFMALAGLAGSAFATNGYFSHGYGMKAKGMAGAATTNTDDAFGGANNPAAMAF
CCHHHHHHHHHHHHCCCCCEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
AGNRLDLGVDLFSPRREASMSVPGVSVKSDSNYFLIPEFGYTHQMSNDLALGVTVVGNGG
ECCEEEEEEEECCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCEEEEEEEEECCC
MNTNYPTNLYGGNGKLGIDLMQLIVAPTVAYKVAPNHSIGISPLLGYQRFKAEGLVNPNT
CCCCCCCEEECCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCHHHCCHHHHHCCCCCCCC
GTPIPNAGYDDSFGYGVRVGYLGKITPTVTIGAAYASKMNFDEFSKYNWLFLENGDFDIP
CCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEHHHHCCCHHHHCCEEEEEEECCCCCCC
ENYNLGASWQATSALRLALDYQRINYSGVKAVGAAPSAGGFGYDDVNVVKLGAEYKLNSA
CCCCCCCCCCCCCEEEEEEEEECCCCCCEEEECCCCCCCCCCCCCEEEEEECCCEEECCE
WTLRAGYSHTNNPIKGATATECGAGSVNCGEVTTNILAPAVIKDHATLGFTYTLASGNEL
EEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHCCCEEEEEEEECCCCEE
TMAYMHAFENDVSGYNGNSGGTDTIRMYQDSLGVQYSWKM
EEHHHHHHHHCCCCCCCCCCCCCEEEEEEHHCCEEEEECC
>Mature Secondary Structure
MKFTRVFAFMALAGLAGSAFATNGYFSHGYGMKAKGMAGAATTNTDDAFGGANNPAAMAF
CCHHHHHHHHHHHHCCCCCEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
AGNRLDLGVDLFSPRREASMSVPGVSVKSDSNYFLIPEFGYTHQMSNDLALGVTVVGNGG
ECCEEEEEEEECCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCEEEEEEEEECCC
MNTNYPTNLYGGNGKLGIDLMQLIVAPTVAYKVAPNHSIGISPLLGYQRFKAEGLVNPNT
CCCCCCCEEECCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCHHHCCHHHHHCCCCCCCC
GTPIPNAGYDDSFGYGVRVGYLGKITPTVTIGAAYASKMNFDEFSKYNWLFLENGDFDIP
CCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEHHHHCCCHHHHCCEEEEEEECCCCCCC
ENYNLGASWQATSALRLALDYQRINYSGVKAVGAAPSAGGFGYDDVNVVKLGAEYKLNSA
CCCCCCCCCCCCCEEEEEEEEECCCCCCEEEECCCCCCCCCCCCCEEEEEECCCEEECCE
WTLRAGYSHTNNPIKGATATECGAGSVNCGEVTTNILAPAVIKDHATLGFTYTLASGNEL
EEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHCCCEEEEEEEECCCCEE
TMAYMHAFENDVSGYNGNSGGTDTIRMYQDSLGVQYSWKM
EEHHHHHHHHCCCCCCCCCCCCCEEEEEEHHCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA