Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is nirQ [H]

Identifier: 74316576

GI number: 74316576

Start: 587700

End: 588515

Strand: Reverse

Name: nirQ [H]

Synonym: Tbd_0558

Alternate gene names: 74316576

Gene position: 588515-587700 (Counterclockwise)

Preceding gene: 74316577

Following gene: 74316575

Centisome position: 20.23

GC content: 67.4

Gene sequence:

>816_bases
ATGAACGACATGTCCACGCCCGGCCTCGATACCCTCTCCGCGGTCCCGTTCTACCAGCCGGTCGGCAACGAGTGCGAACT
GTTCGAGTACGCGTTCCGCAAGCGCCTGCCGCTGCTGATCAAGGGGCCGACCGGCTGCGGCAAGACGCGCTTCGTCGCGC
ACATGGCCGCGCGCCTCGCGCGACCGCTGATCACGGTCGCCTGCCACGACGACCTCACCGCGGCGGATCTCGTCGGCCGC
CATCTGATCGGCGACGGCCAGACCGTGTGGTCGGACGGCCCCCTGACGCGCGCGGTGCGCGAAGGCGGCATCTGCTATCT
CGACGAGATCGTCGAAGCGCGCAAGGACACGACGGTCGTGCTGCATCCGCTGACCGATGACCGGCGCATCCTGCCGATCG
AGCGCACGGGCGAGGAACTGCAGGCGCCCGACGACTTCATGCTCGTCGTCTCCTACAACCCGGGCTACCAGAACCTCCTG
AAAAGCCTCAAACCGTCGACGCGCCAGCGCTTCGTCGCGATCAGCTTCGATTTCCCACCGGCAGCGCTCGAGGAAAAGAT
CGTCATCGCGGAGACCGGTGTCTCGCCGCTCGTCGCGAGACAGCTCGTCAACCTCGCCGGCCACCTGCGCCAGCTGAAGG
ACCACGACCTCGAGGAGGCGGCGTCGACGCGCCTGCTCGTGTATGCCGCAAGCCTCGTCCAGGCCGGCTGCGACCCGGTC
GCCGCCTGCGAAGCGGCGCTCGTCGAATCGCTGACCGACGACAAGGACACGGCCGAAGCACTGCTCGAAGTCATCAAGGC
GACCTTCGGCAACTAG

Upstream 100 bases:

>100_bases
CGGCGCGCCCTGGCGCTGGATCGTGCTGGGTTGGCTATTCTTGGTGCTGGGCCTCATCGCCTATGCCTTCCAAACGACGT
AGAAGCAACCGGAGAATTCC

Downstream 100 bases:

>100_bases
GCCATGGACGCGCCGCCCGACCCGCGCGTGGTCGCCGTTCAGGCCGAAGCGCTCTACCTCCTGAACCTGCTTCTGATGCC
CGGGCTCGCCTTCCTGCTCC

Product: putative nitric oxide reductase activation protein NorQ

Products: nitric oxide; reduced acceptor

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MNDMSTPGLDTLSAVPFYQPVGNECELFEYAFRKRLPLLIKGPTGCGKTRFVAHMAARLARPLITVACHDDLTAADLVGR
HLIGDGQTVWSDGPLTRAVREGGICYLDEIVEARKDTTVVLHPLTDDRRILPIERTGEELQAPDDFMLVVSYNPGYQNLL
KSLKPSTRQRFVAISFDFPPAALEEKIVIAETGVSPLVARQLVNLAGHLRQLKDHDLEEAASTRLLVYAASLVQAGCDPV
AACEAALVESLTDDKDTAEALLEVIKATFGN

Sequences:

>Translated_271_residues
MNDMSTPGLDTLSAVPFYQPVGNECELFEYAFRKRLPLLIKGPTGCGKTRFVAHMAARLARPLITVACHDDLTAADLVGR
HLIGDGQTVWSDGPLTRAVREGGICYLDEIVEARKDTTVVLHPLTDDRRILPIERTGEELQAPDDFMLVVSYNPGYQNLL
KSLKPSTRQRFVAISFDFPPAALEEKIVIAETGVSPLVARQLVNLAGHLRQLKDHDLEEAASTRLLVYAASLVQAGCDPV
AACEAALVESLTDDKDTAEALLEVIKATFGN
>Mature_271_residues
MNDMSTPGLDTLSAVPFYQPVGNECELFEYAFRKRLPLLIKGPTGCGKTRFVAHMAARLARPLITVACHDDLTAADLVGR
HLIGDGQTVWSDGPLTRAVREGGICYLDEIVEARKDTTVVLHPLTDDRRILPIERTGEELQAPDDFMLVVSYNPGYQNLL
KSLKPSTRQRFVAISFDFPPAALEEKIVIAETGVSPLVARQLVNLAGHLRQLKDHDLEEAASTRLLVYAASLVQAGCDPV
AACEAALVESLTDDKDTAEALLEVIKATFGN

Specific function: Activator of nitrite and nitric oxide reductases [H]

COG id: COG0714

COG function: function code R; MoxR-like ATPases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbbQ/NirQ/NorQ/GpvN family [H]

Homologues:

Organism=Homo sapiens, GI24415404, Length=171, Percent_Identity=30.9941520467836, Blast_Score=75, Evalue=9e-14,
Organism=Saccharomyces cerevisiae, GI6323135, Length=191, Percent_Identity=31.413612565445, Blast_Score=82, Evalue=7e-17,
Organism=Drosophila melanogaster, GI161076562, Length=193, Percent_Identity=29.0155440414508, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI161076560, Length=193, Percent_Identity=29.0155440414508, Blast_Score=82, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011704
- InterPro:   IPR013615 [H]

Pfam domain/function: PF07728 AAA_5; PF08406 CbbQ_C [H]

EC number: 1.7.99.7

Molecular weight: Translated: 29567; Mature: 29567

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDMSTPGLDTLSAVPFYQPVGNECELFEYAFRKRLPLLIKGPTGCGKTRFVAHMAARLA
CCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHH
RPLITVACHDDLTAADLVGRHLIGDGQTVWSDGPLTRAVREGGICYLDEIVEARKDTTVV
HHHEEEEECCCCHHHHHHHHHHCCCCCEEECCCCHHHHHHHCCCEEHHHHHHHCCCCEEE
LHPLTDDRRILPIERTGEELQAPDDFMLVVSYNPGYQNLLKSLKPSTRQRFVAISFDFPP
EEECCCCCEEEEHHCCCHHHCCCCCEEEEEEECCCHHHHHHHCCCCCCCEEEEEEECCCC
AALEEKIVIAETGVSPLVARQLVNLAGHLRQLKDHDLEEAASTRLLVYAASLVQAGCDPV
HHHHCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHH
AACEAALVESLTDDKDTAEALLEVIKATFGN
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNDMSTPGLDTLSAVPFYQPVGNECELFEYAFRKRLPLLIKGPTGCGKTRFVAHMAARLA
CCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHH
RPLITVACHDDLTAADLVGRHLIGDGQTVWSDGPLTRAVREGGICYLDEIVEARKDTTVV
HHHEEEEECCCCHHHHHHHHHHCCCCCEEECCCCHHHHHHHCCCEEHHHHHHHCCCCEEE
LHPLTDDRRILPIERTGEELQAPDDFMLVVSYNPGYQNLLKSLKPSTRQRFVAISFDFPP
EEECCCCCEEEEHHCCCHHHCCCCCEEEEEEECCCHHHHHHHCCCCCCCEEEEEEECCCC
AALEEKIVIAETGVSPLVARQLVNLAGHLRQLKDHDLEEAASTRLLVYAASLVQAGCDPV
HHHHCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHH
AACEAALVESLTDDKDTAEALLEVIKATFGN
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: nitrous oxide; acceptor; H2O

Specific reaction: nitrous oxide + acceptor + H2O = 2 nitric oxide + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1468562 [H]