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The map label for this gene is tapC [H]

Identifier: 74316564

GI number: 74316564

Start: 570771

End: 571976

Strand: Reverse

Name: tapC [H]

Synonym: Tbd_0546

Alternate gene names: 74316564

Gene position: 571976-570771 (Counterclockwise)

Preceding gene: 74316565

Following gene: 74316563

Centisome position: 19.66

GC content: 67.16

Gene sequence:

>1206_bases
ATGCCGTTTTTCGACTACCGCGCCGTCGACCAGACCGGACGCAACGTGCGCGGGACGCTGTCGGCGGTCAACGACGTCGA
CCTCGAACTGCGGCTCAAGCGCATGGGGCTCGACCTCATCACGCTGTCCGAGCTGTCGCGGCAGTACGCGCCGCAGGGCC
GCGACCGCGTCACGCGGCGAGACCTCGTGACCTTCTGCATCCACATGCGCTACATCACGCGCGCCGGCATCCCGCTGCTT
GAAGGCCTGCGCGACCTGCGCGACAGCATGGACAAGCGCGGCTTCCGCGACGTGCTGACCGCGTTGCTCGAGGACCTCGA
AGGCGGCAAGGTGCTGTCGCAGGCGCTGGCGGCGCACCCCGCCGTGTTCGGCGCCGTGTTCGTCCACAGCGTCAAGGCTG
GCGAGCAGACCGGCCTCCTCGACGCGGTCTTCGAGCGCCTCGCGGAATCGCTCAAATGGCAGGAGGAAGTCGCTGCCAAG
GCGCGGCGGCTGATGATTTATCCGCTGCTGGTGCTCGCCGTCGTCGGCGCGGCGATCCTGTTCCTGCTGATTTACCTCGT
GCCCCAGGTGCTCACGCTCGTCGAGACCATGGGCGTCGTCCTCCCGCTGCCGACGCTGATCCTGATGGCCGTGTCCGAGG
CGGTGCGCTCGTACTGGCTGATCGGTCTGCTCCTGGCCTTCGCGCTCGGCGTCGGCGTACCGCTCTGGGTGACGAAGAAC
GAGGCCGGGCGCGCGTGGTGGGACCGCGCCCAGCTGCGACTGCCGGTGGTCGGGCCGATCGTGAAGAAAATCGTCCTTTC
GCGTTTCACCAACACCCTGGCGATGATGTACCGCTCCGGGGTGAGCGTGCTCGACGCGCTGCGCGCGGGCGAAATGGTCG
CGGGAAACCGCCTGATCGCCGAGGGCATCCGCCGTGCCGGCCAGCAGATCGCCGAAGGGCGCGGCCTGTCGGAAAGCTTT
CATTCGCTCGCGCTGTTCCCGCCGCTGGTGATCCGCATGCTGCGCGTCGGCGAGACGACCGGCGCGCTCGACGAAGCCCT
CGACAACGTAACCTATTTCTATAACCGCGAGGTGCTCGACTCGATCGAAAACGGCCTAAGGGTCCTCGAGCCGATGCTCA
CGGCCATTCTCGGGCTGCTGCTCGGCGGCATTCTGGTGTCGGTGCTGCTGCCGATTTACGACCTCATCGGAAACCTGCCG
CTGTGA

Upstream 100 bases:

>100_bases
ACCACCCGCTCGCCGAGGACGGCGTCAAGCGCGTGCTCGACGGCGTCACCTCGCTCGCCGAAGTCGCGCGCGTCGTCGAC
CTGACCGGGCGGGCCTGACG

Downstream 100 bases:

>100_bases
TGCTCGACCATCGCCTGATCCTGCTTGCGACGGCACGCCAGATCGGCGTCCTCGACTGGCGGCCCGGGCGCATGCACTGG
CTGGGTGAGTTCCGCGCAAC

Product: type IV pilus assembly protein PilC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 400

Protein sequence:

>401_residues
MPFFDYRAVDQTGRNVRGTLSAVNDVDLELRLKRMGLDLITLSELSRQYAPQGRDRVTRRDLVTFCIHMRYITRAGIPLL
EGLRDLRDSMDKRGFRDVLTALLEDLEGGKVLSQALAAHPAVFGAVFVHSVKAGEQTGLLDAVFERLAESLKWQEEVAAK
ARRLMIYPLLVLAVVGAAILFLLIYLVPQVLTLVETMGVVLPLPTLILMAVSEAVRSYWLIGLLLAFALGVGVPLWVTKN
EAGRAWWDRAQLRLPVVGPIVKKIVLSRFTNTLAMMYRSGVSVLDALRAGEMVAGNRLIAEGIRRAGQQIAEGRGLSESF
HSLALFPPLVIRMLRVGETTGALDEALDNVTYFYNREVLDSIENGLRVLEPMLTAILGLLLGGILVSVLLPIYDLIGNLP
L

Sequences:

>Translated_401_residues
MPFFDYRAVDQTGRNVRGTLSAVNDVDLELRLKRMGLDLITLSELSRQYAPQGRDRVTRRDLVTFCIHMRYITRAGIPLL
EGLRDLRDSMDKRGFRDVLTALLEDLEGGKVLSQALAAHPAVFGAVFVHSVKAGEQTGLLDAVFERLAESLKWQEEVAAK
ARRLMIYPLLVLAVVGAAILFLLIYLVPQVLTLVETMGVVLPLPTLILMAVSEAVRSYWLIGLLLAFALGVGVPLWVTKN
EAGRAWWDRAQLRLPVVGPIVKKIVLSRFTNTLAMMYRSGVSVLDALRAGEMVAGNRLIAEGIRRAGQQIAEGRGLSESF
HSLALFPPLVIRMLRVGETTGALDEALDNVTYFYNREVLDSIENGLRVLEPMLTAILGLLLGGILVSVLLPIYDLIGNLP
L
>Mature_400_residues
PFFDYRAVDQTGRNVRGTLSAVNDVDLELRLKRMGLDLITLSELSRQYAPQGRDRVTRRDLVTFCIHMRYITRAGIPLLE
GLRDLRDSMDKRGFRDVLTALLEDLEGGKVLSQALAAHPAVFGAVFVHSVKAGEQTGLLDAVFERLAESLKWQEEVAAKA
RRLMIYPLLVLAVVGAAILFLLIYLVPQVLTLVETMGVVLPLPTLILMAVSEAVRSYWLIGLLLAFALGVGVPLWVTKNE
AGRAWWDRAQLRLPVVGPIVKKIVLSRFTNTLAMMYRSGVSVLDALRAGEMVAGNRLIAEGIRRAGQQIAEGRGLSESFH
SLALFPPLVIRMLRVGETTGALDEALDNVTYFYNREVLDSIENGLRVLEPMLTAILGLLLGGILVSVLLPIYDLIGNLPL

Specific function: Involved in the translocation of the type IV pilin [H]

COG id: COG1459

COG function: function code NU; Type II secretory pathway, component PulF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP F family [H]

Homologues:

Organism=Escherichia coli, GI1789724, Length=394, Percent_Identity=28.4263959390863, Blast_Score=159, Evalue=3e-40,
Organism=Escherichia coli, GI1786295, Length=344, Percent_Identity=26.1627906976744, Blast_Score=111, Evalue=9e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003004
- InterPro:   IPR018076
- InterPro:   IPR001992 [H]

Pfam domain/function: PF00482 GSPII_F [H]

EC number: NA

Molecular weight: Translated: 44249; Mature: 44118

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PFFDYRAVDQTGRNVRGTLSAVNDVDLELRLKRMGLDLITLSELSRQYAPQGRDRVTRR
CCCCCHHHHHCCCCHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHH
DLVTFCIHMRYITRAGIPLLEGLRDLRDSMDKRGFRDVLTALLEDLEGGKVLSQALAAHP
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHH
AVFGAVFVHSVKAGEQTGLLDAVFERLAESLKWQEEVAAKARRLMIYPLLVLAVVGAAIL
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLLIYLVPQVLTLVETMGVVLPLPTLILMAVSEAVRSYWLIGLLLAFALGVGVPLWVTKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC
EAGRAWWDRAQLRLPVVGPIVKKIVLSRFTNTLAMMYRSGVSVLDALRAGEMVAGNRLIA
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCHHHHH
EGIRRAGQQIAEGRGLSESFHSLALFPPLVIRMLRVGETTGALDEALDNVTYFYNREVLD
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
SIENGLRVLEPMLTAILGLLLGGILVSVLLPIYDLIGNLPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8820654 [H]