| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316562
Identifier: 74316562
GI number: 74316562
Start: 568676
End: 569278
Strand: Reverse
Name: 74316562
Synonym: Tbd_0544
Alternate gene names: NA
Gene position: 569278-568676 (Counterclockwise)
Preceding gene: 74316563
Following gene: 74316561
Centisome position: 19.56
GC content: 71.64
Gene sequence:
>603_bases ATGACACGCCCCCCCTTCGCCGCCCTCAAGTTTCACCTGTTGCTCGTGCTGGTCGCGCTGCTGCTCGCGGGCGCCGGCAT CTGGTGGGGGGGCGGTGAAGCCGCGCGCGCCGCGGCGGAGCTCGAGGCGCAGCAAGGCGCGCTCGACGCGGTGCGGCGCA AGCTCGAGAGTAGCCGCCAGCAACAGCACCTGATCGCGACCCATCTCGGCGCTTATCGGGCGCTCGTCGCGCGCGGCTTC GTCGGCGCCGAAGACCGGCTCGCGTGGATCGAGGCGGCGCAGCTCGCGAACCGCGATGCCGGTCTTTACGGGCTCGACTA CCGCCTGGCGCCGCGCACCGATGCGCTGCCCGCGCTCGCCGACGGCCTCCCGCTCGGGCAAACCGTGATGACGCTGGCCA TGCCCGTGTTGGTTGAAACCGATCTGCCGCGCTTTCTCGCGGCGCTGAAGGCGCGCGCGCCGGGCGTCTACCGCGTCCAG GGTTGCCGGCTGAGCAAGCGCGAAGACCTCGCGCTCGCCGCCGCCAGCCGGCCGACCTTGCAGGCAGAATGCGAACTGCT GTGGTTCACCGTCGCAGCGACGGATCGGGGGCAGGATGCGTAA
Upstream 100 bases:
>100_bases ACTCGACCGGCACGCTGGCGGGCAAGACCGTCGCAGGCGACGCGGCGAGCGCACCCGCCGCACGCTTCAGCGTCAGCGCC CGTCTCGCCGAGGTCGCGCG
Downstream 100 bases:
>100_bases CCGGTCTTCGCGCCGATTCCCGTCGTGTCTTGCCGCGCCGCTGCTCGGCACGCTGAGCCTCCTCGTCCTCGGCGTCGCAC CGGCGCAAGCGACCGAGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MTRPPFAALKFHLLLVLVALLLAGAGIWWGGGEAARAAAELEAQQGALDAVRRKLESSRQQQHLIATHLGAYRALVARGF VGAEDRLAWIEAAQLANRDAGLYGLDYRLAPRTDALPALADGLPLGQTVMTLAMPVLVETDLPRFLAALKARAPGVYRVQ GCRLSKREDLALAAASRPTLQAECELLWFTVAATDRGQDA
Sequences:
>Translated_200_residues MTRPPFAALKFHLLLVLVALLLAGAGIWWGGGEAARAAAELEAQQGALDAVRRKLESSRQQQHLIATHLGAYRALVARGF VGAEDRLAWIEAAQLANRDAGLYGLDYRLAPRTDALPALADGLPLGQTVMTLAMPVLVETDLPRFLAALKARAPGVYRVQ GCRLSKREDLALAAASRPTLQAECELLWFTVAATDRGQDA >Mature_199_residues TRPPFAALKFHLLLVLVALLLAGAGIWWGGGEAARAAAELEAQQGALDAVRRKLESSRQQQHLIATHLGAYRALVARGFV GAEDRLAWIEAAQLANRDAGLYGLDYRLAPRTDALPALADGLPLGQTVMTLAMPVLVETDLPRFLAALKARAPGVYRVQG CRLSKREDLALAAASRPTLQAECELLWFTVAATDRGQDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21490; Mature: 21359
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPPFAALKFHLLLVLVALLLAGAGIWWGGGEAARAAAELEAQQGALDAVRRKLESSRQ CCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH QQHLIATHLGAYRALVARGFVGAEDRLAWIEAAQLANRDAGLYGLDYRLAPRTDALPALA HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEECCEEECCCCCCCHHHH DGLPLGQTVMTLAMPVLVETDLPRFLAALKARAPGVYRVQGCRLSKREDLALAAASRPTL CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHECCCCCCC QAECELLWFTVAATDRGQDA HHCEEEEEEEEEECCCCCCC >Mature Secondary Structure TRPPFAALKFHLLLVLVALLLAGAGIWWGGGEAARAAAELEAQQGALDAVRRKLESSRQ CCCCHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH QQHLIATHLGAYRALVARGFVGAEDRLAWIEAAQLANRDAGLYGLDYRLAPRTDALPALA HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEECCEEECCCCCCCHHHH DGLPLGQTVMTLAMPVLVETDLPRFLAALKARAPGVYRVQGCRLSKREDLALAAASRPTL CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHECCCCCCC QAECELLWFTVAATDRGQDA HHCEEEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA