Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316561

Identifier: 74316561

GI number: 74316561

Start: 568261

End: 568683

Strand: Reverse

Name: 74316561

Synonym: Tbd_0543

Alternate gene names: NA

Gene position: 568683-568261 (Counterclockwise)

Preceding gene: 74316562

Following gene: 74316560

Centisome position: 19.54

GC content: 72.1

Gene sequence:

>423_bases
ATGCGTAACCGGTCTTCGCGCCGATTCCCGTCGTGTCTTGCCGCGCCGCTGCTCGGCACGCTGAGCCTCCTCGTCCTCGG
CGTCGCACCGGCGCAAGCGACCGAGATCGGCCGCCTTTTCTTCACCCCGGCCGAGCGCGCGCAACTCGAGGCGGCGCGGG
CGCGGACCAGTGGCCGCGCGCCATCCCCGGCCCCGTCTGCCGCGAGCGACACGCCGCCGCCCGTACGTTACGACGGGGTC
GTGATCCGTTCCGACGGCAAGACGACGCGCTGGGTCGACGGCGCGGCCGAGTTCGACGGGACCGGCCCGTCAGGCTTGAA
GCCGGGCCAGATCCGCAGCGACGGCAAGGTGTACGAACCGTATCAGGTGCTGCGACCGTCCACCCCGCCTTCGCCGCCGC
TCGAGAAGGAACCCGCCCCATGA

Upstream 100 bases:

>100_bases
AAGCGCGAAGACCTCGCGCTCGCCGCCGCCAGCCGGCCGACCTTGCAGGCAGAATGCGAACTGCTGTGGTTCACCGTCGC
AGCGACGGATCGGGGGCAGG

Downstream 100 bases:

>100_bases
CCCCGCAACGCGGCTTCACGCTGATCGAACTCGCGATCGTGCTCGTGATCATGACCATCCTGATCGGGGGGCTCGCGGTT
CCGTTGTCGGCTCAGATTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MRNRSSRRFPSCLAAPLLGTLSLLVLGVAPAQATEIGRLFFTPAERAQLEAARARTSGRAPSPAPSAASDTPPPVRYDGV
VIRSDGKTTRWVDGAAEFDGTGPSGLKPGQIRSDGKVYEPYQVLRPSTPPSPPLEKEPAP

Sequences:

>Translated_140_residues
MRNRSSRRFPSCLAAPLLGTLSLLVLGVAPAQATEIGRLFFTPAERAQLEAARARTSGRAPSPAPSAASDTPPPVRYDGV
VIRSDGKTTRWVDGAAEFDGTGPSGLKPGQIRSDGKVYEPYQVLRPSTPPSPPLEKEPAP
>Mature_140_residues
MRNRSSRRFPSCLAAPLLGTLSLLVLGVAPAQATEIGRLFFTPAERAQLEAARARTSGRAPSPAPSAASDTPPPVRYDGV
VIRSDGKTTRWVDGAAEFDGTGPSGLKPGQIRSDGKVYEPYQVLRPSTPPSPPLEKEPAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14805; Mature: 14805

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNRSSRRFPSCLAAPLLGTLSLLVLGVAPAQATEIGRLFFTPAERAQLEAARARTSGRA
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEECCCHHHHHHHHHHHHCCCC
PSPAPSAASDTPPPVRYDGVVIRSDGKTTRWVDGAAEFDGTGPSGLKPGQIRSDGKVYEP
CCCCCCCCCCCCCCEEECCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEECC
YQVLRPSTPPSPPLEKEPAP
HHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRNRSSRRFPSCLAAPLLGTLSLLVLGVAPAQATEIGRLFFTPAERAQLEAARARTSGRA
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEECCCHHHHHHHHHHHHCCCC
PSPAPSAASDTPPPVRYDGVVIRSDGKTTRWVDGAAEFDGTGPSGLKPGQIRSDGKVYEP
CCCCCCCCCCCCCCEEECCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEECC
YQVLRPSTPPSPPLEKEPAP
HHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA