| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316561
Identifier: 74316561
GI number: 74316561
Start: 568261
End: 568683
Strand: Reverse
Name: 74316561
Synonym: Tbd_0543
Alternate gene names: NA
Gene position: 568683-568261 (Counterclockwise)
Preceding gene: 74316562
Following gene: 74316560
Centisome position: 19.54
GC content: 72.1
Gene sequence:
>423_bases ATGCGTAACCGGTCTTCGCGCCGATTCCCGTCGTGTCTTGCCGCGCCGCTGCTCGGCACGCTGAGCCTCCTCGTCCTCGG CGTCGCACCGGCGCAAGCGACCGAGATCGGCCGCCTTTTCTTCACCCCGGCCGAGCGCGCGCAACTCGAGGCGGCGCGGG CGCGGACCAGTGGCCGCGCGCCATCCCCGGCCCCGTCTGCCGCGAGCGACACGCCGCCGCCCGTACGTTACGACGGGGTC GTGATCCGTTCCGACGGCAAGACGACGCGCTGGGTCGACGGCGCGGCCGAGTTCGACGGGACCGGCCCGTCAGGCTTGAA GCCGGGCCAGATCCGCAGCGACGGCAAGGTGTACGAACCGTATCAGGTGCTGCGACCGTCCACCCCGCCTTCGCCGCCGC TCGAGAAGGAACCCGCCCCATGA
Upstream 100 bases:
>100_bases AAGCGCGAAGACCTCGCGCTCGCCGCCGCCAGCCGGCCGACCTTGCAGGCAGAATGCGAACTGCTGTGGTTCACCGTCGC AGCGACGGATCGGGGGCAGG
Downstream 100 bases:
>100_bases CCCCGCAACGCGGCTTCACGCTGATCGAACTCGCGATCGTGCTCGTGATCATGACCATCCTGATCGGGGGGCTCGCGGTT CCGTTGTCGGCTCAGATTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MRNRSSRRFPSCLAAPLLGTLSLLVLGVAPAQATEIGRLFFTPAERAQLEAARARTSGRAPSPAPSAASDTPPPVRYDGV VIRSDGKTTRWVDGAAEFDGTGPSGLKPGQIRSDGKVYEPYQVLRPSTPPSPPLEKEPAP
Sequences:
>Translated_140_residues MRNRSSRRFPSCLAAPLLGTLSLLVLGVAPAQATEIGRLFFTPAERAQLEAARARTSGRAPSPAPSAASDTPPPVRYDGV VIRSDGKTTRWVDGAAEFDGTGPSGLKPGQIRSDGKVYEPYQVLRPSTPPSPPLEKEPAP >Mature_140_residues MRNRSSRRFPSCLAAPLLGTLSLLVLGVAPAQATEIGRLFFTPAERAQLEAARARTSGRAPSPAPSAASDTPPPVRYDGV VIRSDGKTTRWVDGAAEFDGTGPSGLKPGQIRSDGKVYEPYQVLRPSTPPSPPLEKEPAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14805; Mature: 14805
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNRSSRRFPSCLAAPLLGTLSLLVLGVAPAQATEIGRLFFTPAERAQLEAARARTSGRA CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEECCCHHHHHHHHHHHHCCCC PSPAPSAASDTPPPVRYDGVVIRSDGKTTRWVDGAAEFDGTGPSGLKPGQIRSDGKVYEP CCCCCCCCCCCCCCEEECCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEECC YQVLRPSTPPSPPLEKEPAP HHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRNRSSRRFPSCLAAPLLGTLSLLVLGVAPAQATEIGRLFFTPAERAQLEAARARTSGRA CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEECCCHHHHHHHHHHHHCCCC PSPAPSAASDTPPPVRYDGVVIRSDGKTTRWVDGAAEFDGTGPSGLKPGQIRSDGKVYEP CCCCCCCCCCCCCCEEECCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEECC YQVLRPSTPPSPPLEKEPAP HHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA