Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316542

Identifier: 74316542

GI number: 74316542

Start: 552344

End: 552907

Strand: Reverse

Name: 74316542

Synonym: Tbd_0524

Alternate gene names: NA

Gene position: 552907-552344 (Counterclockwise)

Preceding gene: 74316543

Following gene: 74316541

Centisome position: 19.0

GC content: 68.26

Gene sequence:

>564_bases
ATGGCACGTTTCTATCCCGCACTCGAGGCCCGACACCGCGCCTTCATCGCCGCCCAGAAGGTCTTTTTCACTGCGAGCGG
CACGGCCGATGGCCGCCTCAACCTCTCGCCCAAGGGCATGGACAGCGTGCGCGTGCTGTCCGACGTGCGCGTCGCCTACC
TCGATCTCACCGGCAGCGGCAACGAAACCGCGGCCCACCTCAGGCACGACGGCCGACTCACGATGATGTGGTGCAGCTTC
GACGCCGATCCGCTGATCCTGCGCGCCTACGGCCGCGGCCGCGTCGTGCGTCGCCAGGACGCAGAGTGGGCCGCGCTTCG
TCACCACTTCGCCGACCTGCCCGGCGAGCGGCAAATCATCGTGCTCGACATCGACTCGGTGCAGACCTCGTGCGGCTACG
CGGTGCCGCGCTACCGCTACCTCGGCGAGCGCGAAACCCTTGCGCGCTGGGTCGAAAAGAAAGGGCCGGTCGGCCTTGTC
GAGTACTGGCGGGAGAAAAACCAGGTCAGCGTCGACGGCCTGCCGACGGGCCTGCTCGACGACGCGGCCCCCGATCCGTC
CTGA

Upstream 100 bases:

>100_bases
TTCCGCTGAAACTCAGCGTGAAGCAGAACCTGCTCGAAATGAACGACAGCGTCACGCGCCTGCGCATCCTCAACGAGTTT
CTCAAGCGGCAGATCAACTG

Downstream 100 bases:

>100_bases
TCGGGCGCCCTCGAGCAATACGCCCGGCGGCGGATAGAGGTCGGCTCCGCACGAATGCTCGGAGCGCGCCCCCCGGGGCG
TCAAGTCGGAATTGTCTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Pyridoxamine 5-Phosphate Oxidase Family Protein; Pyridoxamine 5-Phosphate Oxidase-Like Protein; Signal Transduction Histidine Kinase; Pyridoxamine-Phosphate Oxidase; Pyridoxamine 5-Phosphate Oxidase Family

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MARFYPALEARHRAFIAAQKVFFTASGTADGRLNLSPKGMDSVRVLSDVRVAYLDLTGSGNETAAHLRHDGRLTMMWCSF
DADPLILRAYGRGRVVRRQDAEWAALRHHFADLPGERQIIVLDIDSVQTSCGYAVPRYRYLGERETLARWVEKKGPVGLV
EYWREKNQVSVDGLPTGLLDDAAPDPS

Sequences:

>Translated_187_residues
MARFYPALEARHRAFIAAQKVFFTASGTADGRLNLSPKGMDSVRVLSDVRVAYLDLTGSGNETAAHLRHDGRLTMMWCSF
DADPLILRAYGRGRVVRRQDAEWAALRHHFADLPGERQIIVLDIDSVQTSCGYAVPRYRYLGERETLARWVEKKGPVGLV
EYWREKNQVSVDGLPTGLLDDAAPDPS
>Mature_186_residues
ARFYPALEARHRAFIAAQKVFFTASGTADGRLNLSPKGMDSVRVLSDVRVAYLDLTGSGNETAAHLRHDGRLTMMWCSFD
ADPLILRAYGRGRVVRRQDAEWAALRHHFADLPGERQIIVLDIDSVQTSCGYAVPRYRYLGERETLARWVEKKGPVGLVE
YWREKNQVSVDGLPTGLLDDAAPDPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20946; Mature: 20815

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARFYPALEARHRAFIAAQKVFFTASGTADGRLNLSPKGMDSVRVLSDVRVAYLDLTGSG
CCCCCCHHHHHHHHHHEEEEEEEEECCCCCCEEECCCCCCCHHHHHHCCEEEEEEEECCC
NETAAHLRHDGRLTMMWCSFDADPLILRAYGRGRVVRRQDAEWAALRHHFADLPGERQII
CCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEECCCHHHHHHHHHHCCCCCCEEE
VLDIDSVQTSCGYAVPRYRYLGERETLARWVEKKGPVGLVEYWREKNQVSVDGLPTGLLD
EEECCCCCCCCCCCCCHHHHCCCHHHHHHHHHCCCCCCHHHHHHCCCCEEECCCCCCCCC
DAAPDPS
CCCCCCC
>Mature Secondary Structure 
ARFYPALEARHRAFIAAQKVFFTASGTADGRLNLSPKGMDSVRVLSDVRVAYLDLTGSG
CCCCCHHHHHHHHHHEEEEEEEEECCCCCCEEECCCCCCCHHHHHHCCEEEEEEEECCC
NETAAHLRHDGRLTMMWCSFDADPLILRAYGRGRVVRRQDAEWAALRHHFADLPGERQII
CCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEECCCHHHHHHHHHHCCCCCCEEE
VLDIDSVQTSCGYAVPRYRYLGERETLARWVEKKGPVGLVEYWREKNQVSVDGLPTGLLD
EEECCCCCCCCCCCCCHHHHCCCHHHHHHHHHCCCCCCHHHHHHCCCCEEECCCCCCCCC
DAAPDPS
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA