| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316541
Identifier: 74316541
GI number: 74316541
Start: 551556
End: 552101
Strand: Reverse
Name: 74316541
Synonym: Tbd_0523
Alternate gene names: NA
Gene position: 552101-551556 (Counterclockwise)
Preceding gene: 74316542
Following gene: 74316539
Centisome position: 18.97
GC content: 66.12
Gene sequence:
>546_bases ATGACACTGCGCACACTCGGTCTTCTGGCCGGTCTAGCCCTGGCGAGCAGCGCCCAGGCGGTCACGCTGCAACTAGTCGA CACACACTATCTCGGCGCCTTCGACGGCGGCGAACTCTACGGCGAGCTCTTCGCGGTCGCCGACGCGGGCACGATCGATC ACGCCCTCAGCTTTGACATCACCGGCGGGCTTTACGCCGGTTCCGGCGTCTTCGATCTTTCTCTGGGCAACATCACCGAC ATCACGGGGCTCAGCGCGATCATCTTCAAAGGCGCAAGCAGCACGCCCTACGTGACCTTCACCCCGGTCTCGGGGGGAGA CCTCCTGATGCTGCCAACCGGCACCTATTTCGGCGTCGGCAACTACACGCTGCAGATCGAGGGCGAGGCCATAGGCAGCG GGCTGTTCGGCCTTCCTGCCGGGTCCTACATCATCGGCGCCGCGACGCTCGCGGTTCCCGAGCCCGAAACCTGGGCCATG CTGCTCGCCGCGCTCGGCCTCGTGGTTCTACGCGTACGCGCCGCAGGCAAGGCCGACCCCGCCTGA
Upstream 100 bases:
>100_bases GAATGCGCTGACGAATCAACACGTCTCCGGGGCGGCACCGTTCTTGCTTTTCCGGCCTCCATAACAAACATAAACCCCGA TCCTGTTTGGAGGAGTATTC
Downstream 100 bases:
>100_bases GCGGATTCCCTGTCCGCTCAGACGCCGGCCGCGCCGGCGTTTTTTTCGCCCGGGTTTTGCGGCGGCGGGGCGACCGCCGG GGCTTCCGTGGCTGCCGACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MTLRTLGLLAGLALASSAQAVTLQLVDTHYLGAFDGGELYGELFAVADAGTIDHALSFDITGGLYAGSGVFDLSLGNITD ITGLSAIIFKGASSTPYVTFTPVSGGDLLMLPTGTYFGVGNYTLQIEGEAIGSGLFGLPAGSYIIGAATLAVPEPETWAM LLAALGLVVLRVRAAGKADPA
Sequences:
>Translated_181_residues MTLRTLGLLAGLALASSAQAVTLQLVDTHYLGAFDGGELYGELFAVADAGTIDHALSFDITGGLYAGSGVFDLSLGNITD ITGLSAIIFKGASSTPYVTFTPVSGGDLLMLPTGTYFGVGNYTLQIEGEAIGSGLFGLPAGSYIIGAATLAVPEPETWAM LLAALGLVVLRVRAAGKADPA >Mature_180_residues TLRTLGLLAGLALASSAQAVTLQLVDTHYLGAFDGGELYGELFAVADAGTIDHALSFDITGGLYAGSGVFDLSLGNITDI TGLSAIIFKGASSTPYVTFTPVSGGDLLMLPTGTYFGVGNYTLQIEGEAIGSGLFGLPAGSYIIGAATLAVPEPETWAML LAALGLVVLRVRAAGKADPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18303; Mature: 18172
Theoretical pI: Translated: 3.96; Mature: 3.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLRTLGLLAGLALASSAQAVTLQLVDTHYLGAFDGGELYGELFAVADAGTIDHALSFDI CCHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCHHHHEEEEEEECCCCCCCEEEEEC TGGLYAGSGVFDLSLGNITDITGLSAIIFKGASSTPYVTFTPVSGGDLLMLPTGTYFGVG CCCEEECCCEEEEECCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECC NYTLQIEGEAIGSGLFGLPAGSYIIGAATLAVPEPETWAMLLAALGLVVLRVRAAGKADP CEEEEEECCEECCCEECCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCC A C >Mature Secondary Structure TLRTLGLLAGLALASSAQAVTLQLVDTHYLGAFDGGELYGELFAVADAGTIDHALSFDI CHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCHHHHEEEEEEECCCCCCCEEEEEC TGGLYAGSGVFDLSLGNITDITGLSAIIFKGASSTPYVTFTPVSGGDLLMLPTGTYFGVG CCCEEECCCEEEEECCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCEEEEECCCEEECC NYTLQIEGEAIGSGLFGLPAGSYIIGAATLAVPEPETWAMLLAALGLVVLRVRAAGKADP CEEEEEECCEECCCEECCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA