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The map label for this gene is yicC [C]

Identifier: 74316492

GI number: 74316492

Start: 496742

End: 497608

Strand: Reverse

Name: yicC [C]

Synonym: Tbd_0474

Alternate gene names: 74316492

Gene position: 497608-496742 (Counterclockwise)

Preceding gene: 74316506

Following gene: 74316491

Centisome position: 17.1

GC content: 67.13

Gene sequence:

>867_bases
ATGACCACCAGCATGACCGGGTTCGCCGCCCACAGCTTCAATGTCGACCATGCGAGCGTCAATGTCGAGCTGCGAAGCGT
CAACCAACGTTATCTCGAACTGCACTTCCGCCTCGCCGATGAGTTCCGTCCGCTCGAAACGCAGCTGCGTGAACTGCTTC
AGCAGCGCCTGGCGCGGGGCAAGGTCGAGTGCAGGATCGGCCTGGCGCACCTGTCCGCCGCCCCGCCCGATAACGGCCTG
AATCCGGCCATTCTTGAGCGGCTGGTGCGTTGGCAGGACGACGTGCTCGAGCGGCTCCCCGGCGCCGCCCCCTTGAGCGT
CAACGAAGTGCTGCGCTGGCCGGGGGCGATGCAAAACGCCGTGGTATCGCAGGCGACGCTCGACGAGGCAGCGCTCGCCG
GGTTTCGCGCAGCCCTCGACGAACTCGTGGAAAGCCGGCGCCGCGAAGGCGCCAAGCTGCGGCAGCACATCCTCGATCGC
CTCGATGCCGCCGAGGCGCAGGTCGCCGTCCTGAAGCCGCTGCTGCCCGTTCTTGCCGCAGCCCAGCGCGAGAAACTCGG
CGAGCGCCTGCGCGAGGCCCTCGGCGAGGCCGGCCACGAGCGGCTCGCCCAGGAAGTGGCGCTCGCCGCCCAGAAGGTCG
ACGTCGACGAGGAAGTGTCGCGCCTGGCTACCCACTTCACCGAGGTGAGGCGCGTGCTCGATCAGTCCGGCGCGGTCGGC
AAGCGCCTCGACTTCCTGATGCAGGAATTGCATCGCGAAGCGAACACGCTCGGCTCGAAGTCGGTCGCGGTCGAGACCTC
GCGCACCTCGCTCGAACTCAAGGTGCTGATCGAGCAGATGCGCGAGCAGGTGCAGAATATTGAATGA

Upstream 100 bases:

>100_bases
GTCGCCATAGTCGAACGTCTATTATCTCGTCAAATCTCCGGCAGGCCCGGCAGACAACCGCTCCCGGACCGCGCCCACAA
CAATTTCAAAGCCTGCATCC

Downstream 100 bases:

>100_bases
GCGATCCGGAGCAACCATGACCCCCCCCGCCAGCCCTGGTGTTCTTTACATCGTCAGCGCCCCCTCCGGCGCCGGCAAGA
CCAGCCTCGTCAAGGCGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MTTSMTGFAAHSFNVDHASVNVELRSVNQRYLELHFRLADEFRPLETQLRELLQQRLARGKVECRIGLAHLSAAPPDNGL
NPAILERLVRWQDDVLERLPGAAPLSVNEVLRWPGAMQNAVVSQATLDEAALAGFRAALDELVESRRREGAKLRQHILDR
LDAAEAQVAVLKPLLPVLAAAQREKLGERLREALGEAGHERLAQEVALAAQKVDVDEEVSRLATHFTEVRRVLDQSGAVG
KRLDFLMQELHREANTLGSKSVAVETSRTSLELKVLIEQMREQVQNIE

Sequences:

>Translated_288_residues
MTTSMTGFAAHSFNVDHASVNVELRSVNQRYLELHFRLADEFRPLETQLRELLQQRLARGKVECRIGLAHLSAAPPDNGL
NPAILERLVRWQDDVLERLPGAAPLSVNEVLRWPGAMQNAVVSQATLDEAALAGFRAALDELVESRRREGAKLRQHILDR
LDAAEAQVAVLKPLLPVLAAAQREKLGERLREALGEAGHERLAQEVALAAQKVDVDEEVSRLATHFTEVRRVLDQSGAVG
KRLDFLMQELHREANTLGSKSVAVETSRTSLELKVLIEQMREQVQNIE
>Mature_287_residues
TTSMTGFAAHSFNVDHASVNVELRSVNQRYLELHFRLADEFRPLETQLRELLQQRLARGKVECRIGLAHLSAAPPDNGLN
PAILERLVRWQDDVLERLPGAAPLSVNEVLRWPGAMQNAVVSQATLDEAALAGFRAALDELVESRRREGAKLRQHILDRL
DAAEAQVAVLKPLLPVLAAAQREKLGERLREALGEAGHERLAQEVALAAQKVDVDEEVSRLATHFTEVRRVLDQSGAVGK
RLDFLMQELHREANTLGSKSVAVETSRTSLELKVLIEQMREQVQNIE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=294, Percent_Identity=39.7959183673469, Blast_Score=195, Evalue=4e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 32112; Mature: 31981

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSMTGFAAHSFNVDHASVNVELRSVNQRYLELHFRLADEFRPLETQLRELLQQRLARG
CCCCCCCCCHHCCCCCHHEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
KVECRIGLAHLSAAPPDNGLNPAILERLVRWQDDVLERLPGAAPLSVNEVLRWPGAMQNA
CHHHEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHH
VVSQATLDEAALAGFRAALDELVESRRREGAKLRQHILDRLDAAEAQVAVLKPLLPVLAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQREKLGERLREALGEAGHERLAQEVALAAQKVDVDEEVSRLATHFTEVRRVLDQSGAVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHH
KRLDFLMQELHREANTLGSKSVAVETSRTSLELKVLIEQMREQVQNIE
HHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TTSMTGFAAHSFNVDHASVNVELRSVNQRYLELHFRLADEFRPLETQLRELLQQRLARG
CCCCCCCCHHCCCCCHHEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
KVECRIGLAHLSAAPPDNGLNPAILERLVRWQDDVLERLPGAAPLSVNEVLRWPGAMQNA
CHHHEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHH
VVSQATLDEAALAGFRAALDELVESRRREGAKLRQHILDRLDAAEAQVAVLKPLLPVLAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQREKLGERLREALGEAGHERLAQEVALAAQKVDVDEEVSRLATHFTEVRRVLDQSGAVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHH
KRLDFLMQELHREANTLGSKSVAVETSRTSLELKVLIEQMREQVQNIE
HHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]