| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316485
Identifier: 74316485
GI number: 74316485
Start: 489486
End: 489971
Strand: Direct
Name: 74316485
Synonym: Tbd_0467
Alternate gene names: NA
Gene position: 489486-489971 (Clockwise)
Preceding gene: 74316484
Following gene: 74316486
Centisome position: 16.82
GC content: 71.6
Gene sequence:
>486_bases GTGCCGCGCCTTCTGGGGGCCTTACGCCAACTCGAGCGGGCGCTGACCCGGCTCGAACTCGGCGTCGCGCTGCTCGCCTT CGCCGCCATGCTCGCGCTCTCACTCGCCGATATCGTCGGGCGCAACCTGCTCCATGCGACCGTGCCGGCGGGCGACGTCG TGCTGCGTCACCTCGTGCTGTGGGTCGCCCTGCCCGGCGCCGCGCTGGCGGCCGCTGCAGGCCGCCATCTGCACCTCGAT CCTGCCAACCTCGCGGCCTGGCCGCGCTGGCGCAGGCTTAGCGCAATCCCCGTCAATCTGGTCGCCGCTGTCGTCTGCAC GTTCCTCGCGCGTGCCGCGTGGGCGTTCTGGCTCGACGAATGGCGGCACCCCTCGGGCCAAGCCTGGCTGGCCTGGCTGA GCCTCATCCTGCCCGCTGCGTTCGCGCTGCTGACGCTGCATTTTCTGCTGCGGGCCGTCCTCGCCCGCGACGTGAAGACG CCATGA
Upstream 100 bases:
>100_bases AAGACCGTCGAGGCGCTCGAAGCGGCGCGTTACCTCTCCGCCGAACTCGACCGCCAGGTGGACACCGCGCTCGCCGACCA CCGCCGCGGCGCGGACTGAG
Downstream 100 bases:
>100_bases CGCTGTTGCCGTTCGTGGCGCTGGCCTTGCTCGGCGTGCCGCTCTTCGTCGTGCTGGGCGCGGCGGCGCTCGTCGCGACC CGCGATGCGCAACTCGATTC
Product: ABC transporter permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MPRLLGALRQLERALTRLELGVALLAFAAMLALSLADIVGRNLLHATVPAGDVVLRHLVLWVALPGAALAAAAGRHLHLD PANLAAWPRWRRLSAIPVNLVAAVVCTFLARAAWAFWLDEWRHPSGQAWLAWLSLILPAAFALLTLHFLLRAVLARDVKT P
Sequences:
>Translated_161_residues MPRLLGALRQLERALTRLELGVALLAFAAMLALSLADIVGRNLLHATVPAGDVVLRHLVLWVALPGAALAAAAGRHLHLD PANLAAWPRWRRLSAIPVNLVAAVVCTFLARAAWAFWLDEWRHPSGQAWLAWLSLILPAAFALLTLHFLLRAVLARDVKT P >Mature_160_residues PRLLGALRQLERALTRLELGVALLAFAAMLALSLADIVGRNLLHATVPAGDVVLRHLVLWVALPGAALAAAAGRHLHLDP ANLAAWPRWRRLSAIPVNLVAAVVCTFLARAAWAFWLDEWRHPSGQAWLAWLSLILPAAFALLTLHFLLRAVLARDVKTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17554; Mature: 17423
Theoretical pI: Translated: 12.11; Mature: 12.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLLGALRQLERALTRLELGVALLAFAAMLALSLADIVGRNLLHATVPAGDVVLRHLVL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH WVALPGAALAAAAGRHLHLDPANLAAWPRWRRLSAIPVNLVAAVVCTFLARAAWAFWLDE HHHCCHHHHHHHCCCCCCCCCHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH WRHPSGQAWLAWLSLILPAAFALLTLHFLLRAVLARDVKTP HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PRLLGALRQLERALTRLELGVALLAFAAMLALSLADIVGRNLLHATVPAGDVVLRHLVL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH WVALPGAALAAAAGRHLHLDPANLAAWPRWRRLSAIPVNLVAAVVCTFLARAAWAFWLDE HHHCCHHHHHHHCCCCCCCCCHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH WRHPSGQAWLAWLSLILPAAFALLTLHFLLRAVLARDVKTP HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA