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The map label for this gene is yiaO [C]

Identifier: 74316484

GI number: 74316484

Start: 488477

End: 489484

Strand: Direct

Name: yiaO [C]

Synonym: Tbd_0466

Alternate gene names: 74316484

Gene position: 488477-489484 (Clockwise)

Preceding gene: 74316483

Following gene: 74316485

Centisome position: 16.79

GC content: 67.76

Gene sequence:

>1008_bases
TTGAGGATACGAAATGTCGTCCTGTTCGTGGGTGCCTTCTTCGCCGCGACCAGCAGCCACGCCGCCGACGCCTACGTCCT
CAAGTTCGCGACGCTCGCGCCGGCCGGCTCGACCTGGATGAAGGCCTTCGACGCTTGGGGCAAGGAACTCGCGCGCGCGA
GCCAGGGGCGGCTGGTCGTGAAGTTCTACCCGGGCGGCATCGCGGGCGACGAACCCGACATGCTGAAGAAGATACGCTTC
GGCCAGTTGCAGGGCGCGGCGCTCGCGGGTCACGGCATCGGCGAGATTTTTCCCCCGGCGCGTATCCTCGAAGCGCCCTT
CCTGTTTCGTGATCATGCCGAGATCGACGCGGTCCGTGCCCGCGTGCTGCCCGCGATCGAAAAAGGCTTTCGCGACAATC
AATACGAGTTGCTCGCCTGGATGGAAGTCGGCAACGTGCACTTCTTCTCGACCAGGCCGCTCGCGAACCTCGACGAGCTC
GCGCGCCGCCGCATCTGGCAGTGGCAGGGCGACCGCTTCATCGCCGCATTTTTCGACGCCAACGGCTGGGCGGCCGTGGC
GCTGCCGATCACCGAAGTCTACCCGGCGCTCGCGACGGGACTCGTCGACACCGTCGTGAGCACGCCCCTCGCGAGCATCG
CCCTGCAATGGTCGGGGAAGACGCCCTATATGAGCACGCGCGCGATGGCAACCGGAATCGGCGCCGTGGTCGTCTCGCGC
AAGTTCTTCGGCGGTCTGCCTGCCGACTTGCAGGCCTTGCTGAAACGTACGGGCGGCCCGTTATCGCAAAGGCTGATCGC
CGACACCCGGCGCGACGACAGCAAAGCGCTCGCGCTGCTGGCCCGCCGCACGCAGCCGATGACGGCGTTCCAGCAGGTCG
ACCTCGCGGCGCAGGCCGCGCGTGCACGCAAGACCGTCGAGGCGCTCGAAGCGGCGCGTTACCTCTCCGCCGAACTCGAC
CGCCAGGTGGACACCGCGCTCGCCGACCACCGCCGCGGCGCGGACTGA

Upstream 100 bases:

>100_bases
TACGCGCGGCGGCCGCCGCTGCCGATCCGGAACTCAATCTGGCGAATGCGCTGGCCAGGAAGCAGGCGGAAGCGCTGCTC
GCGCAAGAGGAGGAATTGTT

Downstream 100 bases:

>100_bases
GGTGCCGCGCCTTCTGGGGGCCTTACGCCAACTCGAGCGGGCGCTGACCCGGCTCGAACTCGGCGTCGCGCTGCTCGCCT
TCGCCGCCATGCTCGCGCTC

Product: periplasmic C4-dicarboxylate binding protein DctP

Products: NA

Alternate protein names: TRAP Dicarboxylate Transporter DctP Subunit; TRAP Dicarboxylate Transporter; Trap Dicarboxylate Transporter; TRAP Dicarboxylate Transporter Subunit DctP; C4-Dicarboxylate Transporter Periplasmic Protein; TRAP Transporter Solute Receptor DctP Family

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MRIRNVVLFVGAFFAATSSHAADAYVLKFATLAPAGSTWMKAFDAWGKELARASQGRLVVKFYPGGIAGDEPDMLKKIRF
GQLQGAALAGHGIGEIFPPARILEAPFLFRDHAEIDAVRARVLPAIEKGFRDNQYELLAWMEVGNVHFFSTRPLANLDEL
ARRRIWQWQGDRFIAAFFDANGWAAVALPITEVYPALATGLVDTVVSTPLASIALQWSGKTPYMSTRAMATGIGAVVVSR
KFFGGLPADLQALLKRTGGPLSQRLIADTRRDDSKALALLARRTQPMTAFQQVDLAAQAARARKTVEALEAARYLSAELD
RQVDTALADHRRGAD

Sequences:

>Translated_335_residues
MRIRNVVLFVGAFFAATSSHAADAYVLKFATLAPAGSTWMKAFDAWGKELARASQGRLVVKFYPGGIAGDEPDMLKKIRF
GQLQGAALAGHGIGEIFPPARILEAPFLFRDHAEIDAVRARVLPAIEKGFRDNQYELLAWMEVGNVHFFSTRPLANLDEL
ARRRIWQWQGDRFIAAFFDANGWAAVALPITEVYPALATGLVDTVVSTPLASIALQWSGKTPYMSTRAMATGIGAVVVSR
KFFGGLPADLQALLKRTGGPLSQRLIADTRRDDSKALALLARRTQPMTAFQQVDLAAQAARARKTVEALEAARYLSAELD
RQVDTALADHRRGAD
>Mature_335_residues
MRIRNVVLFVGAFFAATSSHAADAYVLKFATLAPAGSTWMKAFDAWGKELARASQGRLVVKFYPGGIAGDEPDMLKKIRF
GQLQGAALAGHGIGEIFPPARILEAPFLFRDHAEIDAVRARVLPAIEKGFRDNQYELLAWMEVGNVHFFSTRPLANLDEL
ARRRIWQWQGDRFIAAFFDANGWAAVALPITEVYPALATGLVDTVVSTPLASIALQWSGKTPYMSTRAMATGIGAVVVSR
KFFGGLPADLQALLKRTGGPLSQRLIADTRRDDSKALALLARRTQPMTAFQQVDLAAQAARARKTVEALEAARYLSAELD
RQVDTALADHRRGAD

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36596; Mature: 36596

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIRNVVLFVGAFFAATSSHAADAYVLKFATLAPAGSTWMKAFDAWGKELARASQGRLVV
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEE
KFYPGGIAGDEPDMLKKIRFGQLQGAALAGHGIGEIFPPARILEAPFLFRDHAEIDAVRA
EECCCCCCCCCHHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHCCCHHCCCHHHHHHHH
RVLPAIEKGFRDNQYELLAWMEVGNVHFFSTRPLANLDELARRRIWQWQGDRFIAAFFDA
HHHHHHHHCCCCCCEEEEEEEEECCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECC
NGWAAVALPITEVYPALATGLVDTVVSTPLASIALQWSGKTPYMSTRAMATGIGAVVVSR
CCCEEEEEEHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCCCCHHHHHHHHHHHHHHHH
KFFGGLPADLQALLKRTGGPLSQRLIADTRRDDSKALALLARRTQPMTAFQQVDLAAQAA
HHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
RARKTVEALEAARYLSAELDRQVDTALADHRRGAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRIRNVVLFVGAFFAATSSHAADAYVLKFATLAPAGSTWMKAFDAWGKELARASQGRLVV
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEE
KFYPGGIAGDEPDMLKKIRFGQLQGAALAGHGIGEIFPPARILEAPFLFRDHAEIDAVRA
EECCCCCCCCCHHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHCCCHHCCCHHHHHHHH
RVLPAIEKGFRDNQYELLAWMEVGNVHFFSTRPLANLDELARRRIWQWQGDRFIAAFFDA
HHHHHHHHCCCCCCEEEEEEEEECCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECC
NGWAAVALPITEVYPALATGLVDTVVSTPLASIALQWSGKTPYMSTRAMATGIGAVVVSR
CCCEEEEEEHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCCCCHHHHHHHHHHHHHHHH
KFFGGLPADLQALLKRTGGPLSQRLIADTRRDDSKALALLARRTQPMTAFQQVDLAAQAA
HHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
RARKTVEALEAARYLSAELDRQVDTALADHRRGAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA