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The map label for this gene is yebA [C]

Identifier: 74316476

GI number: 74316476

Start: 475017

End: 476333

Strand: Reverse

Name: yebA [C]

Synonym: Tbd_0458

Alternate gene names: 74316476

Gene position: 476333-475017 (Counterclockwise)

Preceding gene: 74316481

Following gene: 74316475

Centisome position: 16.37

GC content: 65.98

Gene sequence:

>1317_bases
ATGCCGCTCACCAAACTGAGAATCTTAACCGATCGCATGACGGGAGCGGAACGCCGCTTCAAATTGCGTACCCTGGTCAC
GCTGTCGAGCCTACCGTTGTTTGGGGTCGTCGCGGCCTTCGGCCTTGCACCCGACACCAACACCAACAGCATTACGCCGC
AGACGGTCATCGAAGGCATCGCCCTGCCCGCTTCCTACGCCGGTAGCGGGGACATGACGTTCGAGCGCGAGAGCACCATC
CAATCCGGCGACACGCTCTCGAGCGCGCTCGCCCGCCTGCAGCTTGACGACCTGGAGATCCAGCAGCTCGTGTCAAACAA
GGCGCTGCGTCCGCTCGCGGCGGAAATCCGCGCCGGCAAGCGCATCCAGGCGACGACCACCCAGGACGGCCAGCTCGTGT
CGCTGCGGTTCGAGCGGCGCGGCGCGCCGACAATGACCGTGACCCGGGAAGGCGACGGCTACGTGGCGACCGAGGCCAGT
GACGCGCTGGAGACTCGCGTGGTGATGCGCTCGGGCCGCATCCTGCTGTCGTTGTACGGCGCCACCGACGCCGCCGGAAT
ACCGGACAAGATCGCCGACCAGATGGCCGAGACGTTCTCGACGAATCTCGACTTCCGCGAGGACCTGCGCCGCGGCGACA
GCTTCTCGGTGATTTATACGGTCAACTATCGCAACGGCGAACCGGTTTCGCCCGGCAAGCTGCTGGCAGCCGAGTTCGTC
AACGCCGGCAAGCCGTATCGCGCCGTGCTCTTCCAGGATCCGTTCGGACGTGAGGACTACTACACGCCCGAGGGCGAGTC
GCTCAAGAAAGGCTTTCTGCGCTCGCCGCTCGAGTTTTCCCGCGTAACCTCGAGCTTCAGCAACTCGCGCAAGCATCCGG
TTTACGGCTTCCACCGCGCCCATACCGGCGTCGATTTCGGCGCCCCGACGGGCACGCGGGTCAAGGCCACCGGCGACGCG
ACCGTCGTCTTTGCCGGGCGCCGCGGCGGCTACGGCAATCTCGTCGTGTTGCGACACCCCAACGGATTCGAAACCTACTA
CGCACACCTGAGCGCCTTCGCTACCGGCATCCGCCCGGGGCGCAGCATCGCTCAGGGCCAGCTCATCGCCTATGTCGGCT
CGACGGGGGCTTCAACCGGTCCGCACCTCCACTACGAGGTCCGTATCGCCGGACGTCCGCAGAACCCGATGACCGTCAAG
CTGCCAGGGTCGCCGCCCTTGGCCGACGCGCAGCGCGCGCGCTTCCTCCAGCAGACCGCCGCCTGGTCTGAAAAACTCCA
CCTGCTGCGCGGCACCAATCTCGCCGCACTCGATTGA

Upstream 100 bases:

>100_bases
CTTGCTCAAACGCGTGTGTAAGCCGCTGTTTGAATTCAAAAAAGTCGCCGAGGGGCATTTGTGGTAGACTCCCGGCTCGA
TTACAGAAGGGAAACGGTCC

Downstream 100 bases:

>100_bases
GCGCAGTTCCCACGCATGAGGCCGAACCCTACGTCGGCCTCATGTCCGGCACCAGCCTTGACGGCATAGACGCGGTCCTG
GCCGAGATCGGCACCGGCAA

Product: peptidase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 437

Protein sequence:

>438_residues
MPLTKLRILTDRMTGAERRFKLRTLVTLSSLPLFGVVAAFGLAPDTNTNSITPQTVIEGIALPASYAGSGDMTFERESTI
QSGDTLSSALARLQLDDLEIQQLVSNKALRPLAAEIRAGKRIQATTTQDGQLVSLRFERRGAPTMTVTREGDGYVATEAS
DALETRVVMRSGRILLSLYGATDAAGIPDKIADQMAETFSTNLDFREDLRRGDSFSVIYTVNYRNGEPVSPGKLLAAEFV
NAGKPYRAVLFQDPFGREDYYTPEGESLKKGFLRSPLEFSRVTSSFSNSRKHPVYGFHRAHTGVDFGAPTGTRVKATGDA
TVVFAGRRGGYGNLVVLRHPNGFETYYAHLSAFATGIRPGRSIAQGQLIAYVGSTGASTGPHLHYEVRIAGRPQNPMTVK
LPGSPPLADAQRARFLQQTAAWSEKLHLLRGTNLAALD

Sequences:

>Translated_438_residues
MPLTKLRILTDRMTGAERRFKLRTLVTLSSLPLFGVVAAFGLAPDTNTNSITPQTVIEGIALPASYAGSGDMTFERESTI
QSGDTLSSALARLQLDDLEIQQLVSNKALRPLAAEIRAGKRIQATTTQDGQLVSLRFERRGAPTMTVTREGDGYVATEAS
DALETRVVMRSGRILLSLYGATDAAGIPDKIADQMAETFSTNLDFREDLRRGDSFSVIYTVNYRNGEPVSPGKLLAAEFV
NAGKPYRAVLFQDPFGREDYYTPEGESLKKGFLRSPLEFSRVTSSFSNSRKHPVYGFHRAHTGVDFGAPTGTRVKATGDA
TVVFAGRRGGYGNLVVLRHPNGFETYYAHLSAFATGIRPGRSIAQGQLIAYVGSTGASTGPHLHYEVRIAGRPQNPMTVK
LPGSPPLADAQRARFLQQTAAWSEKLHLLRGTNLAALD
>Mature_437_residues
PLTKLRILTDRMTGAERRFKLRTLVTLSSLPLFGVVAAFGLAPDTNTNSITPQTVIEGIALPASYAGSGDMTFERESTIQ
SGDTLSSALARLQLDDLEIQQLVSNKALRPLAAEIRAGKRIQATTTQDGQLVSLRFERRGAPTMTVTREGDGYVATEASD
ALETRVVMRSGRILLSLYGATDAAGIPDKIADQMAETFSTNLDFREDLRRGDSFSVIYTVNYRNGEPVSPGKLLAAEFVN
AGKPYRAVLFQDPFGREDYYTPEGESLKKGFLRSPLEFSRVTSSFSNSRKHPVYGFHRAHTGVDFGAPTGTRVKATGDAT
VVFAGRRGGYGNLVVLRHPNGFETYYAHLSAFATGIRPGRSIAQGQLIAYVGSTGASTGPHLHYEVRIAGRPQNPMTVKL
PGSPPLADAQRARFLQQTAAWSEKLHLLRGTNLAALD

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=345, Percent_Identity=34.7826086956522, Blast_Score=169, Evalue=3e-43,
Organism=Escherichia coli, GI1789099, Length=98, Percent_Identity=36.734693877551, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI87082174, Length=108, Percent_Identity=36.1111111111111, Blast_Score=62, Evalue=8e-11,
Organism=Escherichia coli, GI87082297, Length=95, Percent_Identity=36.8421052631579, Blast_Score=62, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 47558; Mature: 47427

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLTKLRILTDRMTGAERRFKLRTLVTLSSLPLFGVVAAFGLAPDTNTNSITPQTVIEGI
CCCCCEEEEHHHCCCHHHHEEEEEEEEHHCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHH
ALPASYAGSGDMTFERESTIQSGDTLSSALARLQLDDLEIQQLVSNKALRPLAAEIRAGK
CCCCCCCCCCCEEEEHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHCCC
RIQATTTQDGQLVSLRFERRGAPTMTVTREGDGYVATEASDALETRVVMRSGRILLSLYG
EEEEECCCCCEEEEEEEECCCCCEEEEEECCCCEEEECCHHHHHHHHHHHCCCEEEEEEC
ATDAAGIPDKIADQMAETFSTNLDFREDLRRGDSFSVIYTVNYRNGEPVSPGKLLAAEFV
CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHH
NAGKPYRAVLFQDPFGREDYYTPEGESLKKGFLRSPLEFSRVTSSFSNSRKHPVYGFHRA
CCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEHHH
HTGVDFGAPTGTRVKATGDATVVFAGRRGGYGNLVVLRHPNGFETYYAHLSAFATGIRPG
CCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCC
RSIAQGQLIAYVGSTGASTGPHLHYEVRIAGRPQNPMTVKLPGSPPLADAQRARFLQQTA
CCCCCCEEEEEEECCCCCCCCEEEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHH
AWSEKLHLLRGTNLAALD
HHHHHHHHHCCCCEECCC
>Mature Secondary Structure 
PLTKLRILTDRMTGAERRFKLRTLVTLSSLPLFGVVAAFGLAPDTNTNSITPQTVIEGI
CCCCEEEEHHHCCCHHHHEEEEEEEEHHCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHH
ALPASYAGSGDMTFERESTIQSGDTLSSALARLQLDDLEIQQLVSNKALRPLAAEIRAGK
CCCCCCCCCCCEEEEHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHCCC
RIQATTTQDGQLVSLRFERRGAPTMTVTREGDGYVATEASDALETRVVMRSGRILLSLYG
EEEEECCCCCEEEEEEEECCCCCEEEEEECCCCEEEECCHHHHHHHHHHHCCCEEEEEEC
ATDAAGIPDKIADQMAETFSTNLDFREDLRRGDSFSVIYTVNYRNGEPVSPGKLLAAEFV
CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHH
NAGKPYRAVLFQDPFGREDYYTPEGESLKKGFLRSPLEFSRVTSSFSNSRKHPVYGFHRA
CCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEHHH
HTGVDFGAPTGTRVKATGDATVVFAGRRGGYGNLVVLRHPNGFETYYAHLSAFATGIRPG
CCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCC
RSIAQGQLIAYVGSTGASTGPHLHYEVRIAGRPQNPMTVKLPGSPPLADAQRARFLQQTA
CCCCCCEEEEEEECCCCCCCCEEEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHH
AWSEKLHLLRGTNLAALD
HHHHHHHHHCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]