| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is anmK
Identifier: 74316475
GI number: 74316475
Start: 473902
End: 475020
Strand: Reverse
Name: anmK
Synonym: Tbd_0457
Alternate gene names: 74316475
Gene position: 475020-473902 (Counterclockwise)
Preceding gene: 74316476
Following gene: 74316470
Centisome position: 16.32
GC content: 68.72
Gene sequence:
>1119_bases TTGAGCGCAGTTCCCACGCATGAGGCCGAACCCTACGTCGGCCTCATGTCCGGCACCAGCCTTGACGGCATAGACGCGGT CCTGGCCGAGATCGGCACCGGCAACCAAGTTCGCCTGCTCCGTACCCGATACATCCATTATCCCGACGACCTGCGCGCGC AGTTGCTCGCGCTCCATACGCCGCAGGCCGACGAAGTCCATCTCGCGGCGCTTGCCGCCAACGCTCTGGCACGTCTCTAC GCCGAAGCGGTCGGAGCGCTGCTTGAGGGCATCGATCCGGCCAAAATCCGCGCGATCGGCTGCCACGGCCAGACCCTGCG CCACCGGCCGGGGGACGGCTATACGATCCAGATCGGAAACGCGTCGCTGCTGGCCGAACTCGCGGGCATCGCCGTCGTCT CGGACTTCCGAAGCCGCGACATCGCGGCGGGCGGCCAGGGCGCGCCGCTGGTCCCGGCCTTCCACGCCCGCGTGCTGGCC CATCCCGAGATTCACCGGGTCATTGCCAACGTCGGGGGGATCGCGAACATCACGGACCTTCCGCCGAATGGCCCGATCCG GGGCTGGGATACGGGGCCGGGCAACATGCTCATGGACGCGTGGATCCATCGGCATCAGGGAAGCCGGTACGATCGCGATG GGAGTTGGGCCGCCGAGGGCAGCGTGGCCGCCGGACTCCTGCAAGCATTGCTGCGCCACCCCTACCTGGAGCAGCGCCCG CCGAAAAGCGCCGGGCGCGAGCAGTTCAACCTGGAAAGTCTCGACACGACGCTGGCCGGACTAGGGCAGAGGCTCGAGCC GGGCACGGTACAGGCCACCCTGCTCGAATTTACCGCCGTCTCGCTCTGCGACGCCGTGACGCAGGAGTGCCGCGGCGCGC AAGAACTCTACGTCTGTGGCGGCGGCGCGCACAACGGCGCCTTGATGCGGCGCATCGCGGCGCTCCTCCCGCACGTCCGC GTCACGACGACTGCCGACCTGGGCATCGACCCGGATTGGGTCGAGGCGCTCGCGTTTGCTTGGCTCGCCCGGCAGACGAT GCACGGCGAAGCCGGCAACCTGCCTGCCGTGACAGGCGCATGCGGGGAACGCATACTCGGCGCGATCCATCCGGCCTGA
Upstream 100 bases:
>100_bases CGCCCTTGGCCGACGCGCAGCGCGCGCGCTTCCTCCAGCAGACCGCCGCCTGGTCTGAAAAACTCCACCTGCTGCGCGGC ACCAATCTCGCCGCACTCGA
Downstream 100 bases:
>100_bases AGCCGGACCGGAAACGAAAAAAGCGGCCGAAGCCGCTTTCTGCCGGGCGCGCAGCGCCTCAGGCCGAGAAGGACGAGCCG CAGCCGCAGGTGGTCGTGGC
Product: anhydro-N-acetylmuramic acid kinase
Products: NA
Alternate protein names: AnhMurNAc kinase
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MSAVPTHEAEPYVGLMSGTSLDGIDAVLAEIGTGNQVRLLRTRYIHYPDDLRAQLLALHTPQADEVHLAALAANALARLY AEAVGALLEGIDPAKIRAIGCHGQTLRHRPGDGYTIQIGNASLLAELAGIAVVSDFRSRDIAAGGQGAPLVPAFHARVLA HPEIHRVIANVGGIANITDLPPNGPIRGWDTGPGNMLMDAWIHRHQGSRYDRDGSWAAEGSVAAGLLQALLRHPYLEQRP PKSAGREQFNLESLDTTLAGLGQRLEPGTVQATLLEFTAVSLCDAVTQECRGAQELYVCGGGAHNGALMRRIAALLPHVR VTTTADLGIDPDWVEALAFAWLARQTMHGEAGNLPAVTGACGERILGAIHPA
Sequences:
>Translated_372_residues MSAVPTHEAEPYVGLMSGTSLDGIDAVLAEIGTGNQVRLLRTRYIHYPDDLRAQLLALHTPQADEVHLAALAANALARLY AEAVGALLEGIDPAKIRAIGCHGQTLRHRPGDGYTIQIGNASLLAELAGIAVVSDFRSRDIAAGGQGAPLVPAFHARVLA HPEIHRVIANVGGIANITDLPPNGPIRGWDTGPGNMLMDAWIHRHQGSRYDRDGSWAAEGSVAAGLLQALLRHPYLEQRP PKSAGREQFNLESLDTTLAGLGQRLEPGTVQATLLEFTAVSLCDAVTQECRGAQELYVCGGGAHNGALMRRIAALLPHVR VTTTADLGIDPDWVEALAFAWLARQTMHGEAGNLPAVTGACGERILGAIHPA >Mature_371_residues SAVPTHEAEPYVGLMSGTSLDGIDAVLAEIGTGNQVRLLRTRYIHYPDDLRAQLLALHTPQADEVHLAALAANALARLYA EAVGALLEGIDPAKIRAIGCHGQTLRHRPGDGYTIQIGNASLLAELAGIAVVSDFRSRDIAAGGQGAPLVPAFHARVLAH PEIHRVIANVGGIANITDLPPNGPIRGWDTGPGNMLMDAWIHRHQGSRYDRDGSWAAEGSVAAGLLQALLRHPYLEQRPP KSAGREQFNLESLDTTLAGLGQRLEPGTVQATLLEFTAVSLCDAVTQECRGAQELYVCGGGAHNGALMRRIAALLPHVRV TTTADLGIDPDWVEALAFAWLARQTMHGEAGNLPAVTGACGERILGAIHPA
Specific function: Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived
COG id: COG2377
COG function: function code O; Predicted molecular chaperone distantly related to HSP70-fold metalloproteases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anhydro-N-acetylmuramic acid kinase family
Homologues:
Organism=Escherichia coli, GI1787928, Length=367, Percent_Identity=48.7738419618529, Blast_Score=294, Evalue=6e-81,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ANMK_THIDA (Q3SLK0)
Other databases:
- EMBL: CP000116 - RefSeq: YP_314215.1 - ProteinModelPortal: Q3SLK0 - SMR: Q3SLK0 - STRING: Q3SLK0 - GeneID: 3673085 - GenomeReviews: CP000116_GR - KEGG: tbd:Tbd_0457 - NMPDR: fig|292415.3.peg.1028 - eggNOG: COG2377 - HOGENOM: HBG324434 - OMA: GSHGQTV - PhylomeDB: Q3SLK0 - ProtClustDB: PRK09585 - BioCyc: TDEN292415:TBD_0457-MONOMER - HAMAP: MF_01270 - InterPro: IPR005338
Pfam domain/function: PF03702 UPF0075
EC number: NA
Molecular weight: Translated: 39371; Mature: 39240
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVPTHEAEPYVGLMSGTSLDGIDAVLAEIGTGNQVRLLRTRYIHYPDDLRAQLLALHT CCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCEEEEEEEHCCCCCHHHHHHHHHCCC PQADEVHLAALAANALARLYAEAVGALLEGIDPAKIRAIGCHGQTLRHRPGDGYTIQIGN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEECCCCCHHCCCCCCCEEEEECC ASLLAELAGIAVVSDFRSRDIAAGGQGAPLVPAFHARVLAHPEIHRVIANVGGIANITDL HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCC PPNGPIRGWDTGPGNMLMDAWIHRHQGSRYDRDGSWAAEGSVAAGLLQALLRHPYLEQRP CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC PKSAGREQFNLESLDTTLAGLGQRLEPGTVQATLLEFTAVSLCDAVTQECRGAQELYVCG CCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC GGAHNGALMRRIAALLPHVRVTTTADLGIDPDWVEALAFAWLARQTMHGEAGNLPAVTGA CCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH CGERILGAIHPA HHHHHHHHCCCC >Mature Secondary Structure SAVPTHEAEPYVGLMSGTSLDGIDAVLAEIGTGNQVRLLRTRYIHYPDDLRAQLLALHT CCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCEEEEEEEHCCCCCHHHHHHHHHCCC PQADEVHLAALAANALARLYAEAVGALLEGIDPAKIRAIGCHGQTLRHRPGDGYTIQIGN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEECCCCCHHCCCCCCCEEEEECC ASLLAELAGIAVVSDFRSRDIAAGGQGAPLVPAFHARVLAHPEIHRVIANVGGIANITDL HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCC PPNGPIRGWDTGPGNMLMDAWIHRHQGSRYDRDGSWAAEGSVAAGLLQALLRHPYLEQRP CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC PKSAGREQFNLESLDTTLAGLGQRLEPGTVQATLLEFTAVSLCDAVTQECRGAQELYVCG CCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC GGAHNGALMRRIAALLPHVRVTTTADLGIDPDWVEALAFAWLARQTMHGEAGNLPAVTGA CCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH CGERILGAIHPA HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA