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The map label for this gene is omp32 [H]

Identifier: 74316466

GI number: 74316466

Start: 468255

End: 469343

Strand: Direct

Name: omp32 [H]

Synonym: Tbd_0448

Alternate gene names: 74316466

Gene position: 468255-469343 (Clockwise)

Preceding gene: 74316464

Following gene: 74316467

Centisome position: 16.09

GC content: 64.19

Gene sequence:

>1089_bases
ATGAAAAAATCCCTGATCGCCCTGGCCGTCGCCAGCGCCGTCTCCGCCCCGGCTTTCGCGGCCACCAGCAACGTCGACGT
CTACGGCGTGCTGAACTTCGCCGTCGCGAGCATCGATTCCGACACCGGCACCGAAGATCGCCAGCTCTCGCTTGCTTCCC
AGAACAGCCGCATCGGCTTCAAGGGCGCCGAAGACCTCGGCGGCGGCCTGTCCGCGATCTGGCAGATCGAGTCGACCGTT
TTTCTGGACGAAAGCGGCGGCCCCTTCGCGACCCGCAACACCTTCGTCGGCCTCAAGGGCGGTTTCGGTAGCGTTCTGCT
CGGCCGTCACGACACCCCGGTCAAGATGCTGCGCGGCAAGGTCGACAACTTCGGCGACACCCTGGCCGACTCGCGCAACC
TGCTGGGCGCGAACGCCGTTTCTGGCTCGTCCTCCTATGATCTGCGTCCCAACAATACCGTGGTTTACATTTCCCCGAAC
CTCAGCGGCCTGACCCTGATGGCAGCCTACACTGCCGATCACGGCGTTTCTGGTGCGAGCGCAACCTTCCCCAGCTGCGT
GGCCGGTGCGGATTGTAACGATCGCGACGGCTACAGCGTGTCCGCCGACTACGCCAACGGTCCCCTGATGCTGGGTCTGG
GCTATGAGCGTCACAACACGCTGATCAATGCGACCAACGACGAAATCGACCGCAGCATCTGGCGCGCCGTCGCCGGCTTC
AACATCGCCGATTTCAAGCTGGGCGCGGTGTACGAGCGCGCGTCGGGCGACGCCGCACTGGCGTCCGACGATCGCAACGG
CTGGGGCCTGTTCGCCAACTACGCGCTGGGCAACGTCGTCCTCAAGGCCAACTACCTCACGGTCGGCGACTATGAGGGTG
TGAACGACAGCGGCGCCAAGCAGTACACCGTCGGCGTCGACTACAACCTGTCCAAGCGTACGACCGCCTCCCTGTTCTAC
GCGCAGATCAAGAACGACACGAACGCCGGATTCGACATCGGCCGCGCCCAGGGCGTGAGCGACTCGACCACTGTCGCAAA
TGGCGCGGATCCTTCGACCTTCGGCCTCGGCCTGAAGCACTCCTTCTGA

Upstream 100 bases:

>100_bases
GCGAGTCTGGATAATCGACCTCGTCCATCAAGCGCCTTGCATGTCGGACAGCTCTGCAGAGCTTCAATCGGTTTTATTTT
TCTTTATTAGGAGAAAAGCA

Downstream 100 bases:

>100_bases
TTCAACGCCGGGGCAACCCGGTTAGAAAGACGAAGTTTAAGCGGGCTCCTTCGGGGGCCCGTTTTGTTATTGCCTGCCGA
TGCCGTTTACGCCACCTTCA

Product: outer membrane protein (porin)

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MKKSLIALAVASAVSAPAFAATSNVDVYGVLNFAVASIDSDTGTEDRQLSLASQNSRIGFKGAEDLGGGLSAIWQIESTV
FLDESGGPFATRNTFVGLKGGFGSVLLGRHDTPVKMLRGKVDNFGDTLADSRNLLGANAVSGSSSYDLRPNNTVVYISPN
LSGLTLMAAYTADHGVSGASATFPSCVAGADCNDRDGYSVSADYANGPLMLGLGYERHNTLINATNDEIDRSIWRAVAGF
NIADFKLGAVYERASGDAALASDDRNGWGLFANYALGNVVLKANYLTVGDYEGVNDSGAKQYTVGVDYNLSKRTTASLFY
AQIKNDTNAGFDIGRAQGVSDSTTVANGADPSTFGLGLKHSF

Sequences:

>Translated_362_residues
MKKSLIALAVASAVSAPAFAATSNVDVYGVLNFAVASIDSDTGTEDRQLSLASQNSRIGFKGAEDLGGGLSAIWQIESTV
FLDESGGPFATRNTFVGLKGGFGSVLLGRHDTPVKMLRGKVDNFGDTLADSRNLLGANAVSGSSSYDLRPNNTVVYISPN
LSGLTLMAAYTADHGVSGASATFPSCVAGADCNDRDGYSVSADYANGPLMLGLGYERHNTLINATNDEIDRSIWRAVAGF
NIADFKLGAVYERASGDAALASDDRNGWGLFANYALGNVVLKANYLTVGDYEGVNDSGAKQYTVGVDYNLSKRTTASLFY
AQIKNDTNAGFDIGRAQGVSDSTTVANGADPSTFGLGLKHSF
>Mature_362_residues
MKKSLIALAVASAVSAPAFAATSNVDVYGVLNFAVASIDSDTGTEDRQLSLASQNSRIGFKGAEDLGGGLSAIWQIESTV
FLDESGGPFATRNTFVGLKGGFGSVLLGRHDTPVKMLRGKVDNFGDTLADSRNLLGANAVSGSSSYDLRPNNTVVYISPN
LSGLTLMAAYTADHGVSGASATFPSCVAGADCNDRDGYSVSADYANGPLMLGLGYERHNTLINATNDEIDRSIWRAVAGF
NIADFKLGAVYERASGDAALASDDRNGWGLFANYALGNVVLKANYLTVGDYEGVNDSGAKQYTVGVDYNLSKRTTASLFY
AQIKNDTNAGFDIGRAQGVSDSTTVANGADPSTFGLGLKHSF

Specific function: Forms anion selective channels [H]

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 37781; Mature: 37781

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSLIALAVASAVSAPAFAATSNVDVYGVLNFAVASIDSDTGTEDRQLSLASQNSRIGF
CCCHHHHHHHHHHHCCCCEEECCCCEEEEEEEEEEEECCCCCCCCCCEEEEECCCCCCCC
KGAEDLGGGLSAIWQIESTVFLDESGGPFATRNTFVGLKGGFGSVLLGRHDTPVKMLRGK
CCCHHHCCCCEEEEEEEEEEEEECCCCCCEECCEEEEECCCCCEEEECCCCCHHHHHHCC
VDNFGDTLADSRNLLGANAVSGSSSYDLRPNNTVVYISPNLSGLTLMAAYTADHGVSGAS
CCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCC
ATFPSCVAGADCNDRDGYSVSADYANGPLMLGLGYERHNTLINATNDEIDRSIWRAVAGF
CCCCHHHCCCCCCCCCCCEEEECCCCCCEEEEECCHHCCEEEECCCHHHHHHHHHHHHCC
NIADFKLGAVYERASGDAALASDDRNGWGLFANYALGNVVLKANYLTVGDYEGVNDSGAK
CEEEEEEEEEEECCCCCEEEECCCCCCCEEEEECCCCEEEEEEEEEEECCCCCCCCCCCE
QYTVGVDYNLSKRTTASLFYAQIKNDTNAGFDIGRAQGVSDSTTVANGADPSTFGLGLKH
EEEEEECCCCCCCHHHEEEEEEECCCCCCCCCCCCCCCCCCCCEECCCCCCCCEECCEEC
SF
CC
>Mature Secondary Structure
MKKSLIALAVASAVSAPAFAATSNVDVYGVLNFAVASIDSDTGTEDRQLSLASQNSRIGF
CCCHHHHHHHHHHHCCCCEEECCCCEEEEEEEEEEEECCCCCCCCCCEEEEECCCCCCCC
KGAEDLGGGLSAIWQIESTVFLDESGGPFATRNTFVGLKGGFGSVLLGRHDTPVKMLRGK
CCCHHHCCCCEEEEEEEEEEEEECCCCCCEECCEEEEECCCCCEEEECCCCCHHHHHHCC
VDNFGDTLADSRNLLGANAVSGSSSYDLRPNNTVVYISPNLSGLTLMAAYTADHGVSGAS
CCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCC
ATFPSCVAGADCNDRDGYSVSADYANGPLMLGLGYERHNTLINATNDEIDRSIWRAVAGF
CCCCHHHCCCCCCCCCCCEEEECCCCCCEEEEECCHHCCEEEECCCHHHHHHHHHHHHCC
NIADFKLGAVYERASGDAALASDDRNGWGLFANYALGNVVLKANYLTVGDYEGVNDSGAK
CEEEEEEEEEEECCCCCEEEECCCCCCCEEEEECCCCEEEEEEEEEEECCCCCCCCCCCE
QYTVGVDYNLSKRTTASLFYAQIKNDTNAGFDIGRAQGVSDSTTVANGADPSTFGLGLKH
EEEEEECCCCCCCHHHEEEEEEECCCCCCCCCCCCCCCCCCCCEECCCCCCCCEECCEEC
SF
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]