Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316378

Identifier: 74316378

GI number: 74316378

Start: 390604

End: 392190

Strand: Direct

Name: 74316378

Synonym: Tbd_0360

Alternate gene names: NA

Gene position: 390604-392190 (Clockwise)

Preceding gene: 74316377

Following gene: 74316379

Centisome position: 13.42

GC content: 62.95

Gene sequence:

>1587_bases
ATGACGATACGAAGAACGGCGGTCGCGCTCGCGGTCGCGGCAATATGTACGGGCAGCGCATGGGCAGCAGCACCGGAAGA
CGAGCGCGCGCGCGTCGAACTGCTGCATGAGACGACGCTGAACCTGATCCAGCTGCTGGTCGAACAGGGGGTGTTGAAGC
AGGAAGCGGCCGACGCGATGCTGAAGAAAGCACAGCAGCAGGCCGCCGAGAAAACCGCGCAGGCCCAGGCCGCCGAGGCA
GAGGCGACTAAGGGTGTGGTGCGCGTCACCTTCGTGCCCGAGACCGTCAAGCGCGAAATCCGCGAGCAGGTGCGCCAGGA
AGTCGTGGCGCAGGCAAAGCTCGAACGCTGGGGCGACGTCAACGCGGTGCCCGAATGGCTCGACCGCCTGAAGTGGGAGG
GAGACTTCCGTCTGCGCTATCAGGGCGACCTATTTTCGGAGAACAACGCACCTGAAGCGACGTTTCAGGCGATCGGCCAG
AATGTCAGCAACACGCTCGAGGACCGTCAGCGTGAACGCGTCCGCCTGCGCCTGGGGCTGAGCGCCAACGTCGCGGGCGG
TGTCGACGCCGGCATCCGCATCACGACGGGCAATACGTCCGATCCGGTGTCGACCAACCAGACACTGGGCAACTACGACA
ACAAATACAGCCTGGTACTCGATCGCGCCTACCTCAAATTGACGCCGGTCGACGACCTCGCGTTGTGGGGCGGCCGTATC
CCGAATCCTTTCTTCTCGACCGATCTGGTATGGGACGACGACCTCAACTTCGAGGGCGCCGCCGTGAGGTACGCGCCGGG
GGCACCAAACCTCGCGCGCGCGTTCAAGCCTTTCGTCACCGCGGGCGTGTTTCCACTGCAGGAAATCGAACAACGGACTG
GCGTCGCGGCGCAGGACAAGTGGTTGTACGGCGCCCAAGCCGGACTGGAGTGGGCGCCGTCGACGCGTGCGCGCTTCAAG
TTCGGCGCGGCGTACTACGCCTATCGGAACATCGCCGGCGTCTTGAATACCACGCCCACGACGACCGGACTGTATGACCT
CACCGCGCCGCAATCGCGCCAGAAGGGCAATTCGCTGTTCGTCATCGACAGCGACGCGAACAACGACAACACGCAGGACG
ACCCGGTCCATGGGCTTGCCGCCGACTATCGCATCGCGAACGTCACGCTCGTCGCCGACCTAGCGGAGTTCCACCCGGTC
CACGTCATCGGCACGTTCGATTGGGCGCGCAACGTCGGATACGACCAGACCGAAATCCTGACGCGCACCGGCCAGAATAT
CGAGCCCGAAACCGACGCTTACTTGGTCAAACTCACGATCGGGCATACCAAATTCAGCTACGTCGACGACCACGAATGGC
AGGCGTTCGTCGGCTACCGCTACGTCGAACGCGACGCCGTGCTCGACGCGTTCACCGATTCGGATTTCCACTTGGGCGGC
ACCAACCACAAGGGCTTCATGATCGGCGGTTCGTATGCGCTCTTCAAGAACACCTGGCTGTCGGCAAAGTGGATGTCGTC
GGACGAGATCAGCGGCCTGCCGCTCGCTATCGACGTCTTCCAGCTCGACCTCAATGCAAAGTTCTAA

Upstream 100 bases:

>100_bases
ACGGGCATGCGCGCGCTGCGCGACTACCCCCCCGTGGACATGCCGCAGCCGATGAAGATACGCGTGACGTCACGCGCATG
AACGTGAACAAGAGAACGGT

Downstream 100 bases:

>100_bases
GGCCTTGATTCTCCTCGTGGGGCTAGCGCCGGCCTACGCAGTTGCGCAGCCGCTGGCCGACACCGAGCTGGGATGGCTGG
TCACCGAATCGACCGAGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 528; Mature: 527

Protein sequence:

>528_residues
MTIRRTAVALAVAAICTGSAWAAAPEDERARVELLHETTLNLIQLLVEQGVLKQEAADAMLKKAQQQAAEKTAQAQAAEA
EATKGVVRVTFVPETVKREIREQVRQEVVAQAKLERWGDVNAVPEWLDRLKWEGDFRLRYQGDLFSENNAPEATFQAIGQ
NVSNTLEDRQRERVRLRLGLSANVAGGVDAGIRITTGNTSDPVSTNQTLGNYDNKYSLVLDRAYLKLTPVDDLALWGGRI
PNPFFSTDLVWDDDLNFEGAAVRYAPGAPNLARAFKPFVTAGVFPLQEIEQRTGVAAQDKWLYGAQAGLEWAPSTRARFK
FGAAYYAYRNIAGVLNTTPTTTGLYDLTAPQSRQKGNSLFVIDSDANNDNTQDDPVHGLAADYRIANVTLVADLAEFHPV
HVIGTFDWARNVGYDQTEILTRTGQNIEPETDAYLVKLTIGHTKFSYVDDHEWQAFVGYRYVERDAVLDAFTDSDFHLGG
TNHKGFMIGGSYALFKNTWLSAKWMSSDEISGLPLAIDVFQLDLNAKF

Sequences:

>Translated_528_residues
MTIRRTAVALAVAAICTGSAWAAAPEDERARVELLHETTLNLIQLLVEQGVLKQEAADAMLKKAQQQAAEKTAQAQAAEA
EATKGVVRVTFVPETVKREIREQVRQEVVAQAKLERWGDVNAVPEWLDRLKWEGDFRLRYQGDLFSENNAPEATFQAIGQ
NVSNTLEDRQRERVRLRLGLSANVAGGVDAGIRITTGNTSDPVSTNQTLGNYDNKYSLVLDRAYLKLTPVDDLALWGGRI
PNPFFSTDLVWDDDLNFEGAAVRYAPGAPNLARAFKPFVTAGVFPLQEIEQRTGVAAQDKWLYGAQAGLEWAPSTRARFK
FGAAYYAYRNIAGVLNTTPTTTGLYDLTAPQSRQKGNSLFVIDSDANNDNTQDDPVHGLAADYRIANVTLVADLAEFHPV
HVIGTFDWARNVGYDQTEILTRTGQNIEPETDAYLVKLTIGHTKFSYVDDHEWQAFVGYRYVERDAVLDAFTDSDFHLGG
TNHKGFMIGGSYALFKNTWLSAKWMSSDEISGLPLAIDVFQLDLNAKF
>Mature_527_residues
TIRRTAVALAVAAICTGSAWAAAPEDERARVELLHETTLNLIQLLVEQGVLKQEAADAMLKKAQQQAAEKTAQAQAAEAE
ATKGVVRVTFVPETVKREIREQVRQEVVAQAKLERWGDVNAVPEWLDRLKWEGDFRLRYQGDLFSENNAPEATFQAIGQN
VSNTLEDRQRERVRLRLGLSANVAGGVDAGIRITTGNTSDPVSTNQTLGNYDNKYSLVLDRAYLKLTPVDDLALWGGRIP
NPFFSTDLVWDDDLNFEGAAVRYAPGAPNLARAFKPFVTAGVFPLQEIEQRTGVAAQDKWLYGAQAGLEWAPSTRARFKF
GAAYYAYRNIAGVLNTTPTTTGLYDLTAPQSRQKGNSLFVIDSDANNDNTQDDPVHGLAADYRIANVTLVADLAEFHPVH
VIGTFDWARNVGYDQTEILTRTGQNIEPETDAYLVKLTIGHTKFSYVDDHEWQAFVGYRYVERDAVLDAFTDSDFHLGGT
NHKGFMIGGSYALFKNTWLSAKWMSSDEISGLPLAIDVFQLDLNAKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58505; Mature: 58374

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS00099 THIOLASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIRRTAVALAVAAICTGSAWAAAPEDERARVELLHETTLNLIQLLVEQGVLKQEAADAM
CCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
LKKAQQQAAEKTAQAQAAEAEATKGVVRVTFVPETVKREIREQVRQEVVAQAKLERWGDV
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCC
NAVPEWLDRLKWEGDFRLRYQGDLFSENNAPEATFQAIGQNVSNTLEDRQRERVRLRLGL
CHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECC
SANVAGGVDAGIRITTGNTSDPVSTNQTLGNYDNKYSLVLDRAYLKLTPVDDLALWGGRI
CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCHHHHHCCCCC
PNPFFSTDLVWDDDLNFEGAAVRYAPGAPNLARAFKPFVTAGVFPLQEIEQRTGVAAQDK
CCCCCCCCEEECCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCC
WLYGAQAGLEWAPSTRARFKFGAAYYAYRNIAGVLNTTPTTTGLYDLTAPQSRQKGNSLF
EEEECCCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCEEE
VIDSDANNDNTQDDPVHGLAADYRIANVTLVADLAEFHPVHVIGTFDWARNVGYDQTEIL
EEECCCCCCCCCCCCCCCCCCCEEEEEEEEEEEHHHCCCEEEEEECHHHHCCCCCHHHHH
TRTGQNIEPETDAYLVKLTIGHTKFSYVDDHEWQAFVGYRYVERDAVLDAFTDSDFHLGG
HHCCCCCCCCCCEEEEEEEECCEEECCCCCCCCEEECCEEEEHHHHHHHHCCCCCEEECC
TNHKGFMIGGSYALFKNTWLSAKWMSSDEISGLPLAIDVFQLDLNAKF
CCCCCEEEECCEEEECCCCCEEEECCCCCCCCCCEEEEEEEEECCCCC
>Mature Secondary Structure 
TIRRTAVALAVAAICTGSAWAAAPEDERARVELLHETTLNLIQLLVEQGVLKQEAADAM
CCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
LKKAQQQAAEKTAQAQAAEAEATKGVVRVTFVPETVKREIREQVRQEVVAQAKLERWGDV
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCC
NAVPEWLDRLKWEGDFRLRYQGDLFSENNAPEATFQAIGQNVSNTLEDRQRERVRLRLGL
CHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECC
SANVAGGVDAGIRITTGNTSDPVSTNQTLGNYDNKYSLVLDRAYLKLTPVDDLALWGGRI
CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCHHHHHCCCCC
PNPFFSTDLVWDDDLNFEGAAVRYAPGAPNLARAFKPFVTAGVFPLQEIEQRTGVAAQDK
CCCCCCCCEEECCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCC
WLYGAQAGLEWAPSTRARFKFGAAYYAYRNIAGVLNTTPTTTGLYDLTAPQSRQKGNSLF
EEEECCCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCEEE
VIDSDANNDNTQDDPVHGLAADYRIANVTLVADLAEFHPVHVIGTFDWARNVGYDQTEIL
EEECCCCCCCCCCCCCCCCCCCEEEEEEEEEEEHHHCCCEEEEEECHHHHCCCCCHHHHH
TRTGQNIEPETDAYLVKLTIGHTKFSYVDDHEWQAFVGYRYVERDAVLDAFTDSDFHLGG
HHCCCCCCCCCCEEEEEEEECCEEECCCCCCCCEEECCEEEEHHHHHHHHCCCCCEEECC
TNHKGFMIGGSYALFKNTWLSAKWMSSDEISGLPLAIDVFQLDLNAKF
CCCCCEEEECCEEEECCCCCEEEECCCCCCCCCCEEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA