| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316378
Identifier: 74316378
GI number: 74316378
Start: 390604
End: 392190
Strand: Direct
Name: 74316378
Synonym: Tbd_0360
Alternate gene names: NA
Gene position: 390604-392190 (Clockwise)
Preceding gene: 74316377
Following gene: 74316379
Centisome position: 13.42
GC content: 62.95
Gene sequence:
>1587_bases ATGACGATACGAAGAACGGCGGTCGCGCTCGCGGTCGCGGCAATATGTACGGGCAGCGCATGGGCAGCAGCACCGGAAGA CGAGCGCGCGCGCGTCGAACTGCTGCATGAGACGACGCTGAACCTGATCCAGCTGCTGGTCGAACAGGGGGTGTTGAAGC AGGAAGCGGCCGACGCGATGCTGAAGAAAGCACAGCAGCAGGCCGCCGAGAAAACCGCGCAGGCCCAGGCCGCCGAGGCA GAGGCGACTAAGGGTGTGGTGCGCGTCACCTTCGTGCCCGAGACCGTCAAGCGCGAAATCCGCGAGCAGGTGCGCCAGGA AGTCGTGGCGCAGGCAAAGCTCGAACGCTGGGGCGACGTCAACGCGGTGCCCGAATGGCTCGACCGCCTGAAGTGGGAGG GAGACTTCCGTCTGCGCTATCAGGGCGACCTATTTTCGGAGAACAACGCACCTGAAGCGACGTTTCAGGCGATCGGCCAG AATGTCAGCAACACGCTCGAGGACCGTCAGCGTGAACGCGTCCGCCTGCGCCTGGGGCTGAGCGCCAACGTCGCGGGCGG TGTCGACGCCGGCATCCGCATCACGACGGGCAATACGTCCGATCCGGTGTCGACCAACCAGACACTGGGCAACTACGACA ACAAATACAGCCTGGTACTCGATCGCGCCTACCTCAAATTGACGCCGGTCGACGACCTCGCGTTGTGGGGCGGCCGTATC CCGAATCCTTTCTTCTCGACCGATCTGGTATGGGACGACGACCTCAACTTCGAGGGCGCCGCCGTGAGGTACGCGCCGGG GGCACCAAACCTCGCGCGCGCGTTCAAGCCTTTCGTCACCGCGGGCGTGTTTCCACTGCAGGAAATCGAACAACGGACTG GCGTCGCGGCGCAGGACAAGTGGTTGTACGGCGCCCAAGCCGGACTGGAGTGGGCGCCGTCGACGCGTGCGCGCTTCAAG TTCGGCGCGGCGTACTACGCCTATCGGAACATCGCCGGCGTCTTGAATACCACGCCCACGACGACCGGACTGTATGACCT CACCGCGCCGCAATCGCGCCAGAAGGGCAATTCGCTGTTCGTCATCGACAGCGACGCGAACAACGACAACACGCAGGACG ACCCGGTCCATGGGCTTGCCGCCGACTATCGCATCGCGAACGTCACGCTCGTCGCCGACCTAGCGGAGTTCCACCCGGTC CACGTCATCGGCACGTTCGATTGGGCGCGCAACGTCGGATACGACCAGACCGAAATCCTGACGCGCACCGGCCAGAATAT CGAGCCCGAAACCGACGCTTACTTGGTCAAACTCACGATCGGGCATACCAAATTCAGCTACGTCGACGACCACGAATGGC AGGCGTTCGTCGGCTACCGCTACGTCGAACGCGACGCCGTGCTCGACGCGTTCACCGATTCGGATTTCCACTTGGGCGGC ACCAACCACAAGGGCTTCATGATCGGCGGTTCGTATGCGCTCTTCAAGAACACCTGGCTGTCGGCAAAGTGGATGTCGTC GGACGAGATCAGCGGCCTGCCGCTCGCTATCGACGTCTTCCAGCTCGACCTCAATGCAAAGTTCTAA
Upstream 100 bases:
>100_bases ACGGGCATGCGCGCGCTGCGCGACTACCCCCCCGTGGACATGCCGCAGCCGATGAAGATACGCGTGACGTCACGCGCATG AACGTGAACAAGAGAACGGT
Downstream 100 bases:
>100_bases GGCCTTGATTCTCCTCGTGGGGCTAGCGCCGGCCTACGCAGTTGCGCAGCCGCTGGCCGACACCGAGCTGGGATGGCTGG TCACCGAATCGACCGAGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 528; Mature: 527
Protein sequence:
>528_residues MTIRRTAVALAVAAICTGSAWAAAPEDERARVELLHETTLNLIQLLVEQGVLKQEAADAMLKKAQQQAAEKTAQAQAAEA EATKGVVRVTFVPETVKREIREQVRQEVVAQAKLERWGDVNAVPEWLDRLKWEGDFRLRYQGDLFSENNAPEATFQAIGQ NVSNTLEDRQRERVRLRLGLSANVAGGVDAGIRITTGNTSDPVSTNQTLGNYDNKYSLVLDRAYLKLTPVDDLALWGGRI PNPFFSTDLVWDDDLNFEGAAVRYAPGAPNLARAFKPFVTAGVFPLQEIEQRTGVAAQDKWLYGAQAGLEWAPSTRARFK FGAAYYAYRNIAGVLNTTPTTTGLYDLTAPQSRQKGNSLFVIDSDANNDNTQDDPVHGLAADYRIANVTLVADLAEFHPV HVIGTFDWARNVGYDQTEILTRTGQNIEPETDAYLVKLTIGHTKFSYVDDHEWQAFVGYRYVERDAVLDAFTDSDFHLGG TNHKGFMIGGSYALFKNTWLSAKWMSSDEISGLPLAIDVFQLDLNAKF
Sequences:
>Translated_528_residues MTIRRTAVALAVAAICTGSAWAAAPEDERARVELLHETTLNLIQLLVEQGVLKQEAADAMLKKAQQQAAEKTAQAQAAEA EATKGVVRVTFVPETVKREIREQVRQEVVAQAKLERWGDVNAVPEWLDRLKWEGDFRLRYQGDLFSENNAPEATFQAIGQ NVSNTLEDRQRERVRLRLGLSANVAGGVDAGIRITTGNTSDPVSTNQTLGNYDNKYSLVLDRAYLKLTPVDDLALWGGRI PNPFFSTDLVWDDDLNFEGAAVRYAPGAPNLARAFKPFVTAGVFPLQEIEQRTGVAAQDKWLYGAQAGLEWAPSTRARFK FGAAYYAYRNIAGVLNTTPTTTGLYDLTAPQSRQKGNSLFVIDSDANNDNTQDDPVHGLAADYRIANVTLVADLAEFHPV HVIGTFDWARNVGYDQTEILTRTGQNIEPETDAYLVKLTIGHTKFSYVDDHEWQAFVGYRYVERDAVLDAFTDSDFHLGG TNHKGFMIGGSYALFKNTWLSAKWMSSDEISGLPLAIDVFQLDLNAKF >Mature_527_residues TIRRTAVALAVAAICTGSAWAAAPEDERARVELLHETTLNLIQLLVEQGVLKQEAADAMLKKAQQQAAEKTAQAQAAEAE ATKGVVRVTFVPETVKREIREQVRQEVVAQAKLERWGDVNAVPEWLDRLKWEGDFRLRYQGDLFSENNAPEATFQAIGQN VSNTLEDRQRERVRLRLGLSANVAGGVDAGIRITTGNTSDPVSTNQTLGNYDNKYSLVLDRAYLKLTPVDDLALWGGRIP NPFFSTDLVWDDDLNFEGAAVRYAPGAPNLARAFKPFVTAGVFPLQEIEQRTGVAAQDKWLYGAQAGLEWAPSTRARFKF GAAYYAYRNIAGVLNTTPTTTGLYDLTAPQSRQKGNSLFVIDSDANNDNTQDDPVHGLAADYRIANVTLVADLAEFHPVH VIGTFDWARNVGYDQTEILTRTGQNIEPETDAYLVKLTIGHTKFSYVDDHEWQAFVGYRYVERDAVLDAFTDSDFHLGGT NHKGFMIGGSYALFKNTWLSAKWMSSDEISGLPLAIDVFQLDLNAKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58505; Mature: 58374
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: PS00099 THIOLASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIRRTAVALAVAAICTGSAWAAAPEDERARVELLHETTLNLIQLLVEQGVLKQEAADAM CCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH LKKAQQQAAEKTAQAQAAEAEATKGVVRVTFVPETVKREIREQVRQEVVAQAKLERWGDV HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCC NAVPEWLDRLKWEGDFRLRYQGDLFSENNAPEATFQAIGQNVSNTLEDRQRERVRLRLGL CHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECC SANVAGGVDAGIRITTGNTSDPVSTNQTLGNYDNKYSLVLDRAYLKLTPVDDLALWGGRI CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCHHHHHCCCCC PNPFFSTDLVWDDDLNFEGAAVRYAPGAPNLARAFKPFVTAGVFPLQEIEQRTGVAAQDK CCCCCCCCEEECCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCC WLYGAQAGLEWAPSTRARFKFGAAYYAYRNIAGVLNTTPTTTGLYDLTAPQSRQKGNSLF EEEECCCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCEEE VIDSDANNDNTQDDPVHGLAADYRIANVTLVADLAEFHPVHVIGTFDWARNVGYDQTEIL EEECCCCCCCCCCCCCCCCCCCEEEEEEEEEEEHHHCCCEEEEEECHHHHCCCCCHHHHH TRTGQNIEPETDAYLVKLTIGHTKFSYVDDHEWQAFVGYRYVERDAVLDAFTDSDFHLGG HHCCCCCCCCCCEEEEEEEECCEEECCCCCCCCEEECCEEEEHHHHHHHHCCCCCEEECC TNHKGFMIGGSYALFKNTWLSAKWMSSDEISGLPLAIDVFQLDLNAKF CCCCCEEEECCEEEECCCCCEEEECCCCCCCCCCEEEEEEEEECCCCC >Mature Secondary Structure TIRRTAVALAVAAICTGSAWAAAPEDERARVELLHETTLNLIQLLVEQGVLKQEAADAM CCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH LKKAQQQAAEKTAQAQAAEAEATKGVVRVTFVPETVKREIREQVRQEVVAQAKLERWGDV HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCC NAVPEWLDRLKWEGDFRLRYQGDLFSENNAPEATFQAIGQNVSNTLEDRQRERVRLRLGL CHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECC SANVAGGVDAGIRITTGNTSDPVSTNQTLGNYDNKYSLVLDRAYLKLTPVDDLALWGGRI CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCHHHHHCCCCC PNPFFSTDLVWDDDLNFEGAAVRYAPGAPNLARAFKPFVTAGVFPLQEIEQRTGVAAQDK CCCCCCCCEEECCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCC WLYGAQAGLEWAPSTRARFKFGAAYYAYRNIAGVLNTTPTTTGLYDLTAPQSRQKGNSLF EEEECCCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCEEE VIDSDANNDNTQDDPVHGLAADYRIANVTLVADLAEFHPVHVIGTFDWARNVGYDQTEIL EEECCCCCCCCCCCCCCCCCCCEEEEEEEEEEEHHHCCCEEEEEECHHHHCCCCCHHHHH TRTGQNIEPETDAYLVKLTIGHTKFSYVDDHEWQAFVGYRYVERDAVLDAFTDSDFHLGG HHCCCCCCCCCCEEEEEEEECCEEECCCCCCCCEEECCEEEEHHHHHHHHCCCCCEEECC TNHKGFMIGGSYALFKNTWLSAKWMSSDEISGLPLAIDVFQLDLNAKF CCCCCEEEECCEEEECCCCCEEEECCCCCCCCCCEEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA