| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316377
Identifier: 74316377
GI number: 74316377
Start: 389916
End: 390584
Strand: Direct
Name: 74316377
Synonym: Tbd_0359
Alternate gene names: NA
Gene position: 389916-390584 (Clockwise)
Preceding gene: 74316376
Following gene: 74316378
Centisome position: 13.4
GC content: 68.91
Gene sequence:
>669_bases ATGGAGCAGGGCAAACGCAAACCGGCCTGGATGCGGTGGGGCGGGGTGGCCGTGGGCCTCGTCGCCGCGGTAGTGATCGC AGTCTGGCTGAAGGACATGCTGACGCCGAAGGGGCCGGTGCAAAAAATGGAAGTGCGGCAGATCACGCTGGTAAAGCCGC CACCGCCACCGCCACCGCCACCGCCGCCACCGCCACCCGAGGAGAAGCCTCCCGAGCCCGAGATCAAGGAAGAGGTGAAA CTGGAGGAGCCTCAGCCGACGCCGGACGAGCCCCAGCAGGCCGACGCGCCGCCGCCCGACGGCATCGCCGAGGGCCCGGC GGGCGGCATGTCGACCGACATCGCGCGCGGCGTTCCCACGCTGCCGGGCAGCGGAAACGGCAACCCCTGGGCCTGGTACG ACGCGCTGGTTAACGACGCGGTGAACAGCGCGTTCCAGGCGGCGCTGGTGCGGGAAAAGGCGCTGAAAAACAAGACCTAC AAGGTGATCGTGAAGGTGTGGATCGACGGCAGCGGGCAGGTGACGCGCGTGGCGCTGGCGGGCAGCACCGGAGATGCGCA CGCCGACGAAGTGCTGAAGCAGGCGTTGACGGGCATGCGCGCGCTGCGCGACTACCCCCCCGTGGACATGCCGCAGCCGA TGAAGATACGCGTGACGTCACGCGCATGA
Upstream 100 bases:
>100_bases GGTAGTGCAGTACGGCAAGGTCATGGAGGTGCTCGATCTGCTCGGCCAGGTGGGCATCACGCAGATGGGTCTGGTGACCC AGAAGCTCGCGAAGTAGGGC
Downstream 100 bases:
>100_bases ACGTGAACAAGAGAACGGTATGACGATACGAAGAACGGCGGTCGCGCTCGCGGTCGCGGCAATATGTACGGGCAGCGCAT GGGCAGCAGCACCGGAAGAC
Product: TonB-dependent receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MEQGKRKPAWMRWGGVAVGLVAAVVIAVWLKDMLTPKGPVQKMEVRQITLVKPPPPPPPPPPPPPPEEKPPEPEIKEEVK LEEPQPTPDEPQQADAPPPDGIAEGPAGGMSTDIARGVPTLPGSGNGNPWAWYDALVNDAVNSAFQAALVREKALKNKTY KVIVKVWIDGSGQVTRVALAGSTGDAHADEVLKQALTGMRALRDYPPVDMPQPMKIRVTSRA
Sequences:
>Translated_222_residues MEQGKRKPAWMRWGGVAVGLVAAVVIAVWLKDMLTPKGPVQKMEVRQITLVKPPPPPPPPPPPPPPEEKPPEPEIKEEVK LEEPQPTPDEPQQADAPPPDGIAEGPAGGMSTDIARGVPTLPGSGNGNPWAWYDALVNDAVNSAFQAALVREKALKNKTY KVIVKVWIDGSGQVTRVALAGSTGDAHADEVLKQALTGMRALRDYPPVDMPQPMKIRVTSRA >Mature_222_residues MEQGKRKPAWMRWGGVAVGLVAAVVIAVWLKDMLTPKGPVQKMEVRQITLVKPPPPPPPPPPPPPPEEKPPEPEIKEEVK LEEPQPTPDEPQQADAPPPDGIAEGPAGGMSTDIARGVPTLPGSGNGNPWAWYDALVNDAVNSAFQAALVREKALKNKTY KVIVKVWIDGSGQVTRVALAGSTGDAHADEVLKQALTGMRALRDYPPVDMPQPMKIRVTSRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23835; Mature: 23835
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQGKRKPAWMRWGGVAVGLVAAVVIAVWLKDMLTPKGPVQKMEVRQITLVKPPPPPPPP CCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEEEEEECCCCCCCCC PPPPPPEEKPPEPEIKEEVKLEEPQPTPDEPQQADAPPPDGIAEGPAGGMSTDIARGVPT CCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC LPGSGNGNPWAWYDALVNDAVNSAFQAALVREKALKNKTYKVIVKVWIDGSGQVTRVALA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCEEEEEEE GSTGDAHADEVLKQALTGMRALRDYPPVDMPQPMKIRVTSRA CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCC >Mature Secondary Structure MEQGKRKPAWMRWGGVAVGLVAAVVIAVWLKDMLTPKGPVQKMEVRQITLVKPPPPPPPP CCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEEEEEECCCCCCCCC PPPPPPEEKPPEPEIKEEVKLEEPQPTPDEPQQADAPPPDGIAEGPAGGMSTDIARGVPT CCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC LPGSGNGNPWAWYDALVNDAVNSAFQAALVREKALKNKTYKVIVKVWIDGSGQVTRVALA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCEEEEEEE GSTGDAHADEVLKQALTGMRALRDYPPVDMPQPMKIRVTSRA CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA