Click here to switch to the map view.

The map label for this gene is fixN [H]

Identifier: 74316356

GI number: 74316356

Start: 357340

End: 358794

Strand: Direct

Name: fixN [H]

Synonym: Tbd_0338

Alternate gene names: 74316356

Gene position: 357340-358794 (Clockwise)

Preceding gene: 74316355

Following gene: 74316357

Centisome position: 12.28

GC content: 60.21

Gene sequence:

>1455_bases
ATGTCGGTAAGCACATATTCCGGAGCAGAGCAGTACAACTTTGATATCGTTAAGAAATTTGCCGTCATGTCGCTCGTCTG
GGCGGTGGTGGGCATGTTCGTCGGCGTCTACATCGCCTCCGAACTCGCTTGGCCGTTTCTGAATTTCGATAGTCCCTATT
TTTCGTTCGGCCGTTTCCGGCCCGTGCACACGAGCGCGGTGATCTTCGGCTTCGGCGGCTCGGCGCTGTTCGCTACCTCT
TATTACGTGGTGCAGCGTACCTGCCAGACCCGCCTGATTTCCGACGGCATGGCGAGCTTCACGTTCTGGGGGTGGCAGAC
CGTCATCGTCCTCGCGGCGCTTTCCTACGTCATGGGCTACTCGCAGGGCCGTGAATACGCCGAGATGGAATGGCCGATCG
ACCTGCTGGTCGAGGTCGTCTGGGTCACCTATCTGATCGTGTTCGTCGGCACCATCATGCGCCGCAAGCAGCCGCACATC
TACGTCGCCAACTGGTTCTACCTGTCGTTCATTCTGGCGACGGCGCTGCTGCACACCTTCAATAACCTGGCGATGCCGAT
CGACCTGTTCTCGATGAAGTCGTACAGCCTGTTCTCCGGCACCCAGGACGCGATGACCCAGTGGTGGTACGGCCACAACG
CGGTCGGCTTCTTCCTGACCGCCGCCTTCCTCGGCATGATGTACTACTTCGTGCCCAAGCAGGCCGGCCGCCCGATCTAC
TCCTACCGGCTGTCGATCGTGCACTTCTGGGCGCTTTCCTTCATGTATATGTGGGTCGGTGGTCACCACCTGCACTGGAC
CGCGCTGCCTGACTGGACCTCCTCACTCGCCGCCGCGTTCTCGATCCTGCTCTTGATGCCCTCCTGGGGCGGCATGATCA
ACGGCATCATGACGCTGTCGGGTGCCTGGGACAAACTGCGTACCGATCCGGTCATGCGCTTCATGATCGTCGCACTGTCG
TTCTACGGCATGTCGACCTTCGAAGGCCCGATGATGTCGCTCAAGGAAGTCAACGCCCTCTCGCATTACACCGACTGGAC
CGTCGGCCACGTGCACTCGGGCGCGCTCGGCTGGGTCGCCATGATCTCGTTCGGCTCGCTGTACCACATGATGCCCAAGC
TGTGGGACACCAAGATGTACAGCCGCAAGCTGGTCGAATGGCACTTCTGGCTCGCGACCATCGGCATCGTCCTGTACATC
GTCGCGATGTGGATCTCGGGCATCACCCAGGGTCTGATGTGGCGTGCGTTCGACGAGTTCGGCAACCTCCAATACTCGTT
TGCCGAGTCGGTTGCCGCGATGATGCCTTTCTACGCGATGCGCGCGATCGGCGGGATGTTCTTCCTCAGCGGCGCCGCGA
TCATGGCCTTCAACATGTTCATGACCATTCGTCAGGGCAAGCGCGAAAGCGCGGCGCTGGAGGCCAAGCTCGCAGCCAAG
ATGGCTCACGCATGA

Upstream 100 bases:

>100_bases
TCGTCTATCATATAATCCTTCGGTTTTAATATAAGCATATGCTGTTAAAGGACGCCGTGGAGTCGGCCGGCGTCGTTTCG
GGTCAATTGGAGAGCGGTCG

Downstream 100 bases:

>100_bases
TTCTGGAAAGATAGACAATGAATTTCAATTTCAAGCACGAATGGGTTGAAACCAACATTGGCCTGATGGCCGTGTTGACC
ATGCTCGCGATCAGCGTCGG

Product: cbb3-type cytochrome c oxidase subunit I

Products: NA

Alternate protein names: Cytochrome c oxidase polypeptide I homolog [H]

Number of amino acids: Translated: 484; Mature: 483

Protein sequence:

>484_residues
MSVSTYSGAEQYNFDIVKKFAVMSLVWAVVGMFVGVYIASELAWPFLNFDSPYFSFGRFRPVHTSAVIFGFGGSALFATS
YYVVQRTCQTRLISDGMASFTFWGWQTVIVLAALSYVMGYSQGREYAEMEWPIDLLVEVVWVTYLIVFVGTIMRRKQPHI
YVANWFYLSFILATALLHTFNNLAMPIDLFSMKSYSLFSGTQDAMTQWWYGHNAVGFFLTAAFLGMMYYFVPKQAGRPIY
SYRLSIVHFWALSFMYMWVGGHHLHWTALPDWTSSLAAAFSILLLMPSWGGMINGIMTLSGAWDKLRTDPVMRFMIVALS
FYGMSTFEGPMMSLKEVNALSHYTDWTVGHVHSGALGWVAMISFGSLYHMMPKLWDTKMYSRKLVEWHFWLATIGIVLYI
VAMWISGITQGLMWRAFDEFGNLQYSFAESVAAMMPFYAMRAIGGMFFLSGAAIMAFNMFMTIRQGKRESAALEAKLAAK
MAHA

Sequences:

>Translated_484_residues
MSVSTYSGAEQYNFDIVKKFAVMSLVWAVVGMFVGVYIASELAWPFLNFDSPYFSFGRFRPVHTSAVIFGFGGSALFATS
YYVVQRTCQTRLISDGMASFTFWGWQTVIVLAALSYVMGYSQGREYAEMEWPIDLLVEVVWVTYLIVFVGTIMRRKQPHI
YVANWFYLSFILATALLHTFNNLAMPIDLFSMKSYSLFSGTQDAMTQWWYGHNAVGFFLTAAFLGMMYYFVPKQAGRPIY
SYRLSIVHFWALSFMYMWVGGHHLHWTALPDWTSSLAAAFSILLLMPSWGGMINGIMTLSGAWDKLRTDPVMRFMIVALS
FYGMSTFEGPMMSLKEVNALSHYTDWTVGHVHSGALGWVAMISFGSLYHMMPKLWDTKMYSRKLVEWHFWLATIGIVLYI
VAMWISGITQGLMWRAFDEFGNLQYSFAESVAAMMPFYAMRAIGGMFFLSGAAIMAFNMFMTIRQGKRESAALEAKLAAK
MAHA
>Mature_483_residues
SVSTYSGAEQYNFDIVKKFAVMSLVWAVVGMFVGVYIASELAWPFLNFDSPYFSFGRFRPVHTSAVIFGFGGSALFATSY
YVVQRTCQTRLISDGMASFTFWGWQTVIVLAALSYVMGYSQGREYAEMEWPIDLLVEVVWVTYLIVFVGTIMRRKQPHIY
VANWFYLSFILATALLHTFNNLAMPIDLFSMKSYSLFSGTQDAMTQWWYGHNAVGFFLTAAFLGMMYYFVPKQAGRPIYS
YRLSIVHFWALSFMYMWVGGHHLHWTALPDWTSSLAAAFSILLLMPSWGGMINGIMTLSGAWDKLRTDPVMRFMIVALSF
YGMSTFEGPMMSLKEVNALSHYTDWTVGHVHSGALGWVAMISFGSLYHMMPKLWDTKMYSRKLVEWHFWLATIGIVLYIV
AMWISGITQGLMWRAFDEFGNLQYSFAESVAAMMPFYAMRAIGGMFFLSGAAIMAFNMFMTIRQGKRESAALEAKLAAKM
AHA

Specific function: Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Co I is the catalytic subunit of the enzyme. Electrons originating in cytochrome

COG id: COG3278

COG function: function code O; Cbb3-type cytochrome oxidase, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heme-copper respiratory oxidase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004677
- InterPro:   IPR000883 [H]

Pfam domain/function: PF00115 COX1 [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 55088; Mature: 54957

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: PS50855 COX1 ; PS00077 COX1_CUB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
7.4 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
7.2 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVSTYSGAEQYNFDIVKKFAVMSLVWAVVGMFVGVYIASELAWPFLNFDSPYFSFGRFR
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PVHTSAVIFGFGGSALFATSYYVVQRTCQTRLISDGMASFTFWGWQTVIVLAALSYVMGY
CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
SQGREYAEMEWPIDLLVEVVWVTYLIVFVGTIMRRKQPHIYVANWFYLSFILATALLHTF
HCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHH
NNLAMPIDLFSMKSYSLFSGTQDAMTQWWYGHNAVGFFLTAAFLGMMYYFVPKQAGRPIY
HCCCCCHHHHHCCCCHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHH
SYRLSIVHFWALSFMYMWVGGHHLHWTALPDWTSSLAAAFSILLLMPSWGGMINGIMTLS
HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHC
GAWDKLRTDPVMRFMIVALSFYGMSTFEGPMMSLKEVNALSHYTDWTVGHVHSGALGWVA
CCHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHH
MISFGSLYHMMPKLWDTKMYSRKLVEWHFWLATIGIVLYIVAMWISGITQGLMWRAFDEF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GNLQYSFAESVAAMMPFYAMRAIGGMFFLSGAAIMAFNMFMTIRQGKRESAALEAKLAAK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
MAHA
HCCC
>Mature Secondary Structure 
SVSTYSGAEQYNFDIVKKFAVMSLVWAVVGMFVGVYIASELAWPFLNFDSPYFSFGRFR
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PVHTSAVIFGFGGSALFATSYYVVQRTCQTRLISDGMASFTFWGWQTVIVLAALSYVMGY
CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
SQGREYAEMEWPIDLLVEVVWVTYLIVFVGTIMRRKQPHIYVANWFYLSFILATALLHTF
HCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHH
NNLAMPIDLFSMKSYSLFSGTQDAMTQWWYGHNAVGFFLTAAFLGMMYYFVPKQAGRPIY
HCCCCCHHHHHCCCCHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHH
SYRLSIVHFWALSFMYMWVGGHHLHWTALPDWTSSLAAAFSILLLMPSWGGMINGIMTLS
HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHC
GAWDKLRTDPVMRFMIVALSFYGMSTFEGPMMSLKEVNALSHYTDWTVGHVHSGALGWVA
CCHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHH
MISFGSLYHMMPKLWDTKMYSRKLVEWHFWLATIGIVLYIVAMWISGITQGLMWRAFDEF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GNLQYSFAESVAAMMPFYAMRAIGGMFFLSGAAIMAFNMFMTIRQGKRESAALEAKLAAK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
MAHA
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7753030 [H]