| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is asnB [H]
Identifier: 74316310
GI number: 74316310
Start: 310921
End: 312840
Strand: Direct
Name: asnB [H]
Synonym: Tbd_0292
Alternate gene names: 74316310
Gene position: 310921-312840 (Clockwise)
Preceding gene: 74316309
Following gene: 74316311
Centisome position: 10.69
GC content: 66.46
Gene sequence:
>1920_bases ATGTGCGGCATCACCGGGATTTTCGACACCAGCGGCGTCAACGCGATTTCACGCGACCTGCTGCAGCGCATGAACGAGAC CCAGCACCACCGCGGTCCCGACGAAGGCGGCCTGCATCTCGAACCTGGACTCGGGCTCGGGCATCGGCGCCTGTCGATCA TCGACCTGTCGAGCGGTCAGCAGCCCTTGGCGAACGAGGACGGCAGCGTCGTCGTCGTGTTCAACGGCGAGATCTACAAC TTCCAGGAACTCGTCCCAGAGCTCGAGGCGCTCGGCCATGTCTTCCGCACCCATTCCGACACCGAAGTCATCGTCCACGC GTGGGAGGCCTGGGGCGAGGCATGCGTCGCGCGCTTTCGCGGCATGTTCGCGTTCGTGCTGTGGGATCGCAACCAGGAAA CGCTCTTCGTGGTGCGCGACCGCTTCGGCGTCAAACCGCTCTATTACGCCTTCCTCGACACCGGCGAGTTCATTTTCGGT TCCGAGCTCAAGTCGCTGATGGTCCACCCGAGTCTCGGGCGCGAGGTCGACCCGCTCGCGGTCGAGGACTACTTCGCCTA CGGCTACGTGCCCGAGCCGCGCACCATCTTCAAGCGCGTGCACAAGCTGCCGCCCGGCTTCACGCTGACGCTGAAGCGCG GTGCGCCGCGCGCGCTGCCGAAGCAATACTGGGACATGCCCTTCGCGCCGGTCGCGGTGAAGGACGAAGCCGGCGCGATG GACGAGCTGGTCGAACGCATGAAGGAATCGATCCGCCTGCGCATGATCGCCGACGTGCCGCTCGGCGCCTTCCTCTCGGG CGGCGTCGACTCGAGCGCCGTCGTCGCGATGATGGCGACCCAGTCGTCGACGCCGGTCAACACCTGCTCGATCGGCTTCG ACGACCCGGCGTTCAACGAGATCGAGTACGCGCAGCAGGTCGCCGACCGCTACCACACCCGGCACCACGTCGAGACCGTC GCCGCCGACGACTTCAGCCTGGTTGGCAAGCTCGCCCAGGTCTACGACGAGCCCTACGCTGATTCGTCGGCGCTGCCGAC CTATCGCGTCTGCGAACTCGCGCGCAAGCACGTCAAGGTCGCGCTGTCGGGCGACGGCGGCGACGAGCATTTCGCCGGCT ACCGGCGTTACCGCTGGTTCCGCTACGAGGAACGCATGCGCTCCATCATCCCGCTCGGTCTGCGCCGCCCGCTGTTCGGA ACGCTCGGCCTGCTCTACCCGAAGGCCGACTGGGCACCGAAGATGTTTCGCGCCAAGACGACTTTCGAGGCGCTCGCGCG CGACACTGTCGAAGGCTATTTCCATGGCGTCTCGCTGCTCTCGAACGCCCAGCGCGCCCAGCTTTTTTCGCCGGCGTTCC GGCGTGAGCTGCAGGGCTACCAGGCGGTCGACGTGCTGCGACGCCACGCCGCGGTGGCGCCGACCGACGACCCGCTGTCG CTTGTGCAGTATCTCGACATGAAGACCTATCTCGTCGGCGACATCCTGACCAAGGTCGACCGCGCGAGCATGGCGCATGC GCTCGAAGTGCGCGAGCCGCTGCTCGATCACGAGCTGATGGGCTGGGTCTCCGGTCTTCCGGTCGACCTCAAGCTGCGCG GCAGCGAAGGCAAGTACCTGCTCAAGAAGGCGATGGAGCCCTACCTGCCGCACGACGTGTTGTACCGGAAGAAAATGGGC TTCTCGGTACCGCTCGCGGCCTGGTTCCGCGGCCCGCTCGCGGCGACGATCCGCACGGTCGTGCTCGGCGAGCGGCTCGC CGGGACCGGCATGTTCAACTGCGAATTCCTCCGCGAGGTGGTCGAGGCGCACCAGTCCGGCCGCCGCGATTTTTCGGTGA TCCTGTGGACCGTCCTGATGTTCGACGCCTTCCTCGGCCAGGTGCTGGGCCTCGACGACACGGCGCGCGAGGCGGCATGA
Upstream 100 bases:
>100_bases GGCGCGGGCCTACGCCGACGTTTACGAACAGACGCTTGGCAGGCGACGCCAAACGGCCGTCGACCGGCCCGAATAATCGA CAGAACAGGATTCGACACGC
Downstream 100 bases:
>100_bases AGATCCTGCACGTATTCGACCACACGCTGCCGCTGCATTCCGGCTACACCTTCCGCAGCGCGGCGATCCTGCGCAACCAG CAGAAGCTGGGCTGGCAGAC
Product: asparagine synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 639; Mature: 639
Protein sequence:
>639_residues MCGITGIFDTSGVNAISRDLLQRMNETQHHRGPDEGGLHLEPGLGLGHRRLSIIDLSSGQQPLANEDGSVVVVFNGEIYN FQELVPELEALGHVFRTHSDTEVIVHAWEAWGEACVARFRGMFAFVLWDRNQETLFVVRDRFGVKPLYYAFLDTGEFIFG SELKSLMVHPSLGREVDPLAVEDYFAYGYVPEPRTIFKRVHKLPPGFTLTLKRGAPRALPKQYWDMPFAPVAVKDEAGAM DELVERMKESIRLRMIADVPLGAFLSGGVDSSAVVAMMATQSSTPVNTCSIGFDDPAFNEIEYAQQVADRYHTRHHVETV AADDFSLVGKLAQVYDEPYADSSALPTYRVCELARKHVKVALSGDGGDEHFAGYRRYRWFRYEERMRSIIPLGLRRPLFG TLGLLYPKADWAPKMFRAKTTFEALARDTVEGYFHGVSLLSNAQRAQLFSPAFRRELQGYQAVDVLRRHAAVAPTDDPLS LVQYLDMKTYLVGDILTKVDRASMAHALEVREPLLDHELMGWVSGLPVDLKLRGSEGKYLLKKAMEPYLPHDVLYRKKMG FSVPLAAWFRGPLAATIRTVVLGERLAGTGMFNCEFLREVVEAHQSGRRDFSVILWTVLMFDAFLGQVLGLDDTAREAA
Sequences:
>Translated_639_residues MCGITGIFDTSGVNAISRDLLQRMNETQHHRGPDEGGLHLEPGLGLGHRRLSIIDLSSGQQPLANEDGSVVVVFNGEIYN FQELVPELEALGHVFRTHSDTEVIVHAWEAWGEACVARFRGMFAFVLWDRNQETLFVVRDRFGVKPLYYAFLDTGEFIFG SELKSLMVHPSLGREVDPLAVEDYFAYGYVPEPRTIFKRVHKLPPGFTLTLKRGAPRALPKQYWDMPFAPVAVKDEAGAM DELVERMKESIRLRMIADVPLGAFLSGGVDSSAVVAMMATQSSTPVNTCSIGFDDPAFNEIEYAQQVADRYHTRHHVETV AADDFSLVGKLAQVYDEPYADSSALPTYRVCELARKHVKVALSGDGGDEHFAGYRRYRWFRYEERMRSIIPLGLRRPLFG TLGLLYPKADWAPKMFRAKTTFEALARDTVEGYFHGVSLLSNAQRAQLFSPAFRRELQGYQAVDVLRRHAAVAPTDDPLS LVQYLDMKTYLVGDILTKVDRASMAHALEVREPLLDHELMGWVSGLPVDLKLRGSEGKYLLKKAMEPYLPHDVLYRKKMG FSVPLAAWFRGPLAATIRTVVLGERLAGTGMFNCEFLREVVEAHQSGRRDFSVILWTVLMFDAFLGQVLGLDDTAREAA >Mature_639_residues MCGITGIFDTSGVNAISRDLLQRMNETQHHRGPDEGGLHLEPGLGLGHRRLSIIDLSSGQQPLANEDGSVVVVFNGEIYN FQELVPELEALGHVFRTHSDTEVIVHAWEAWGEACVARFRGMFAFVLWDRNQETLFVVRDRFGVKPLYYAFLDTGEFIFG SELKSLMVHPSLGREVDPLAVEDYFAYGYVPEPRTIFKRVHKLPPGFTLTLKRGAPRALPKQYWDMPFAPVAVKDEAGAM DELVERMKESIRLRMIADVPLGAFLSGGVDSSAVVAMMATQSSTPVNTCSIGFDDPAFNEIEYAQQVADRYHTRHHVETV AADDFSLVGKLAQVYDEPYADSSALPTYRVCELARKHVKVALSGDGGDEHFAGYRRYRWFRYEERMRSIIPLGLRRPLFG TLGLLYPKADWAPKMFRAKTTFEALARDTVEGYFHGVSLLSNAQRAQLFSPAFRRELQGYQAVDVLRRHAAVAPTDDPLS LVQYLDMKTYLVGDILTKVDRASMAHALEVREPLLDHELMGWVSGLPVDLKLRGSEGKYLLKKAMEPYLPHDVLYRKKMG FSVPLAAWFRGPLAATIRTVVLGERLAGTGMFNCEFLREVVEAHQSGRRDFSVILWTVLMFDAFLGQVLGLDDTAREAA
Specific function: Main asparagine synthetase in vegetative cells [H]
COG id: COG0367
COG function: function code E; Asparagine synthase (glutamine-hydrolyzing)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-2 domain [H]
Homologues:
Organism=Homo sapiens, GI168229248, Length=418, Percent_Identity=26.555023923445, Blast_Score=105, Evalue=2e-22, Organism=Homo sapiens, GI168229252, Length=418, Percent_Identity=26.555023923445, Blast_Score=105, Evalue=2e-22, Organism=Homo sapiens, GI168229250, Length=418, Percent_Identity=26.555023923445, Blast_Score=105, Evalue=2e-22, Organism=Homo sapiens, GI296010848, Length=389, Percent_Identity=26.4781491002571, Blast_Score=99, Evalue=1e-20, Organism=Escherichia coli, GI1786889, Length=392, Percent_Identity=30.3571428571429, Blast_Score=159, Evalue=5e-40, Organism=Caenorhabditis elegans, GI71993933, Length=390, Percent_Identity=31.5384615384615, Blast_Score=142, Evalue=6e-34, Organism=Caenorhabditis elegans, GI25147557, Length=390, Percent_Identity=31.5384615384615, Blast_Score=142, Evalue=7e-34, Organism=Caenorhabditis elegans, GI25147560, Length=355, Percent_Identity=30.4225352112676, Blast_Score=127, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6325403, Length=419, Percent_Identity=27.6849642004773, Blast_Score=111, Evalue=4e-25, Organism=Saccharomyces cerevisiae, GI6321563, Length=418, Percent_Identity=27.9904306220096, Blast_Score=104, Evalue=5e-23, Organism=Drosophila melanogaster, GI45553209, Length=396, Percent_Identity=29.040404040404, Blast_Score=141, Evalue=1e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006426 - InterPro: IPR001962 - InterPro: IPR017932 - InterPro: IPR014729 [H]
Pfam domain/function: PF00733 Asn_synthase [H]
EC number: =6.3.5.4 [H]
Molecular weight: Translated: 71746; Mature: 71746
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCGITGIFDTSGVNAISRDLLQRMNETQHHRGPDEGGLHLEPGLGLGHRRLSIIDLSSGQ CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCEEEEEECCCCC QPLANEDGSVVVVFNGEIYNFQELVPELEALGHVFRTHSDTEVIVHAWEAWGEACVARFR CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHH GMFAFVLWDRNQETLFVVRDRFGVKPLYYAFLDTGEFIFGSELKSLMVHPSLGREVDPLA HHEEEEEEECCCCEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCC VEDYFAYGYVPEPRTIFKRVHKLPPGFTLTLKRGAPRALPKQYWDMPFAPVAVKDEAGAM HHHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHCCCCCCCEEECCCCCCH DELVERMKESIRLRMIADVPLGAFLSGGVDSSAVVAMMATQSSTPVNTCSIGFDDPAFNE HHHHHHHHHHHEEEEEECCCHHHHHCCCCCCHHHEEEEECCCCCCCCEEECCCCCCCCHH IEYAQQVADRYHTRHHVETVAADDFSLVGKLAQVYDEPYADSSALPTYRVCELARKHVKV HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHEEE ALSGDGGDEHFAGYRRYRWFRYEERMRSIIPLGLRRPLFGTLGLLYPKADWAPKMFRAKT EEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHCCCCCCCHHHHHHHH TFEALARDTVEGYFHGVSLLSNAQRAQLFSPAFRRELQGYQAVDVLRRHAAVAPTDDPLS HHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHCCHHHHHHHHHHCCCCCCCCHHH LVQYLDMKTYLVGDILTKVDRASMAHALEVREPLLDHELMGWVSGLPVDLKLRGSEGKYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHH LKKAMEPYLPHDVLYRKKMGFSVPLAAWFRGPLAATIRTVVLGERLAGTGMFNCEFLREV HHHHCCCCCCHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH VEAHQSGRRDFSVILWTVLMFDAFLGQVLGLDDTAREAA HHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC >Mature Secondary Structure MCGITGIFDTSGVNAISRDLLQRMNETQHHRGPDEGGLHLEPGLGLGHRRLSIIDLSSGQ CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCEEEEEECCCCC QPLANEDGSVVVVFNGEIYNFQELVPELEALGHVFRTHSDTEVIVHAWEAWGEACVARFR CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHH GMFAFVLWDRNQETLFVVRDRFGVKPLYYAFLDTGEFIFGSELKSLMVHPSLGREVDPLA HHEEEEEEECCCCEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCC VEDYFAYGYVPEPRTIFKRVHKLPPGFTLTLKRGAPRALPKQYWDMPFAPVAVKDEAGAM HHHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHCCCCCCCEEECCCCCCH DELVERMKESIRLRMIADVPLGAFLSGGVDSSAVVAMMATQSSTPVNTCSIGFDDPAFNE HHHHHHHHHHHEEEEEECCCHHHHHCCCCCCHHHEEEEECCCCCCCCEEECCCCCCCCHH IEYAQQVADRYHTRHHVETVAADDFSLVGKLAQVYDEPYADSSALPTYRVCELARKHVKV HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHEEE ALSGDGGDEHFAGYRRYRWFRYEERMRSIIPLGLRRPLFGTLGLLYPKADWAPKMFRAKT EEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHCCCCCCCHHHHHHHH TFEALARDTVEGYFHGVSLLSNAQRAQLFSPAFRRELQGYQAVDVLRRHAAVAPTDDPLS HHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHCCHHHHHHHHHHCCCCCCCCHHH LVQYLDMKTYLVGDILTKVDRASMAHALEVREPLLDHELMGWVSGLPVDLKLRGSEGKYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHH LKKAMEPYLPHDVLYRKKMGFSVPLAAWFRGPLAATIRTVVLGERLAGTGMFNCEFLREV HHHHCCCCCCHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH VEAHQSGRRDFSVILWTVLMFDAFLGQVLGLDDTAREAA HHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377; 8755891; 10498721 [H]