| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316296
Identifier: 74316296
GI number: 74316296
Start: 296675
End: 297277
Strand: Reverse
Name: 74316296
Synonym: Tbd_0278
Alternate gene names: NA
Gene position: 297277-296675 (Counterclockwise)
Preceding gene: 74316297
Following gene: 74316295
Centisome position: 10.22
GC content: 67.0
Gene sequence:
>603_bases GTGAAACGCTACAAGCTGCGTATTCCGGCGCCTGCGGGCAGGCTGGAAACGGTCATCGACGACCCGGAAAACAATCGCCA GGGGCTGCTGCTCGTCGCCCACCCCCATCCGCTGCACGGCGGCAGCCTCGACAACAAGGTCGTGACGACGCTGGCCAAGG CGGCGAACGAGGCGGGATGGGTCAGCGTGCGGCCGAACTTCCGTGGCGTCGGCATGAGCGACGGCGCCTTCGACGCCGGG ATGGGCGAAACCGATGACCTGCTGGCCGTCGCCCGCTTCGTCGAAGCGAGCTACCCGGGCCTGCCCTGGGCGCTCGCCGG TTTCTCCTTCGGCGCCTTCGTGCAGCATCGGCTGCGCCAGGAATTGCCGGCGAAACGCCTGATTCTGGTCGCGCCGGCGG TGACGATGTACGAGTTCGACGCGGTGCCGGCCGATACGGTCGTGATCTTCGGCGAGGCCGACGAGCTGATCCCGCCACCC GCGATCCGCCTGTGGGCCGAGAAACAGCAGCTGACGACCAAGGCGATCCCCGACGCGGGGCATTTCTTCCACGGCAAGCT CAAGGAACTCAAACAGGCTTTTCTCGAGGCCTGCCCGTGCTGA
Upstream 100 bases:
>100_bases CCGAAGGCGTCTGGTACACCTACGTCGACGAGAGCGACATCGACGAGATCTTCGAGGCCCACCTCAAGGAAGGGCGGATC GTCGAGCGCCTGCGGCTCAG
Downstream 100 bases:
>100_bases AGGTCCACGGCCTGACCAAGCGCTACGGCGACGTCGAAGTCGTGCGCGGCCTCGACCTGCACGTACGGCGCGGCGAATGT TTCGGCCTGCTCGGGCCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MKRYKLRIPAPAGRLETVIDDPENNRQGLLLVAHPHPLHGGSLDNKVVTTLAKAANEAGWVSVRPNFRGVGMSDGAFDAG MGETDDLLAVARFVEASYPGLPWALAGFSFGAFVQHRLRQELPAKRLILVAPAVTMYEFDAVPADTVVIFGEADELIPPP AIRLWAEKQQLTTKAIPDAGHFFHGKLKELKQAFLEACPC
Sequences:
>Translated_200_residues MKRYKLRIPAPAGRLETVIDDPENNRQGLLLVAHPHPLHGGSLDNKVVTTLAKAANEAGWVSVRPNFRGVGMSDGAFDAG MGETDDLLAVARFVEASYPGLPWALAGFSFGAFVQHRLRQELPAKRLILVAPAVTMYEFDAVPADTVVIFGEADELIPPP AIRLWAEKQQLTTKAIPDAGHFFHGKLKELKQAFLEACPC >Mature_200_residues MKRYKLRIPAPAGRLETVIDDPENNRQGLLLVAHPHPLHGGSLDNKVVTTLAKAANEAGWVSVRPNFRGVGMSDGAFDAG MGETDDLLAVARFVEASYPGLPWALAGFSFGAFVQHRLRQELPAKRLILVAPAVTMYEFDAVPADTVVIFGEADELIPPP AIRLWAEKQQLTTKAIPDAGHFFHGKLKELKQAFLEACPC
Specific function: Unknown
COG id: COG2945
COG function: function code R; Predicted hydrolase of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000383 [H]
Pfam domain/function: PF02129 Peptidase_S15 [H]
EC number: NA
Molecular weight: Translated: 21792; Mature: 21792
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRYKLRIPAPAGRLETVIDDPENNRQGLLLVAHPHPLHGGSLDNKVVTTLAKAANEAGW CCCEEEECCCCCCCHHHEECCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCE VSVRPNFRGVGMSDGAFDAGMGETDDLLAVARFVEASYPGLPWALAGFSFGAFVQHRLRQ EEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHH ELPAKRLILVAPAVTMYEFDAVPADTVVIFGEADELIPPPAIRLWAEKQQLTTKAIPDAG HCCCCEEEEEECCEEEEEECCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCC HFFHGKLKELKQAFLEACPC CHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKRYKLRIPAPAGRLETVIDDPENNRQGLLLVAHPHPLHGGSLDNKVVTTLAKAANEAGW CCCEEEECCCCCCCHHHEECCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCE VSVRPNFRGVGMSDGAFDAGMGETDDLLAVARFVEASYPGLPWALAGFSFGAFVQHRLRQ EEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHH ELPAKRLILVAPAVTMYEFDAVPADTVVIFGEADELIPPPAIRLWAEKQQLTTKAIPDAG HCCCCEEEEEECCEEEEEECCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCC HFFHGKLKELKQAFLEACPC CHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]