| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316274
Identifier: 74316274
GI number: 74316274
Start: 277246
End: 277893
Strand: Direct
Name: 74316274
Synonym: Tbd_0256
Alternate gene names: NA
Gene position: 277246-277893 (Clockwise)
Preceding gene: 74316273
Following gene: 74316278
Centisome position: 9.53
GC content: 68.67
Gene sequence:
>648_bases ATGCGAACCGACGTACGGAATTGCAGGCCGTGGCGAATTACCGCGAAAACTACGGCGTCTAGGCTGCTGGCTGTCGCCCT GGCGCTGGCAGCGGGCGGCGCGCAGGCCGGGATGTACCGCTGGGTCGACGGCAACGGCCGCGTGCAGTACAGCGACACGC CGCCGACGACATTCCAGACGAGCGGCGGCGTCGAGATGAGCAAGCAGGGCAACGTCGTCAGGCGCACCCAGTCCGAAGCC GAGCGCCGCGCCGAAGCCGAGCGCGTCGCCGAGCAGAAGCGCGTCGCGAAGATCCAGCAGCGCCAGGCGCAACTCGATCG CGCGCTGATGTCGACCTACACGAGCGAGGCGGAAATCGACCTCGCCCGCGACCGTGCGCTCGAGCATCACAAGCTGGCGA TCAAGGGCGCGCGCATCCGCGCCGAGACGGTCGAGCGCAACCTCGCGGAATTGCGTGCACGGATCGCCGGCATCGAAAAA GCCGGCCGCCCGGTCGGGCCGGGCCTCAAGGATCAGCTGGCGCAGGCGGGCCGGGAAAGCGCGGACCTCGCCCACACGGT CGACAGCAACGAGGAAGCGATGACCAAGGTGCGCGAGAAATACGCCGCCGACAAGGCCCGTTTTCGCGAGCTGACGGGCC AGCCCTAA
Upstream 100 bases:
>100_bases CAGGGCGACAAGTCCGCGGTCCAGGAAGTGCGAGAGCAATACGATATTCCGGTCGTGGCCGTGGTCACGCTGGACAACCT GGTGGAGTTTCTGGAACGTG
Downstream 100 bases:
>100_bases GGCGCGGCGCCTTCGCGCCCGCGGCAAGCGCGCAGCTCGCCGGGTCGTCCCCTACTGCAGCTTGGCTTTCAGCAGTTCGT TGACCTGTGCGGGATTGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MRTDVRNCRPWRITAKTTASRLLAVALALAAGGAQAGMYRWVDGNGRVQYSDTPPTTFQTSGGVEMSKQGNVVRRTQSEA ERRAEAERVAEQKRVAKIQQRQAQLDRALMSTYTSEAEIDLARDRALEHHKLAIKGARIRAETVERNLAELRARIAGIEK AGRPVGPGLKDQLAQAGRESADLAHTVDSNEEAMTKVREKYAADKARFRELTGQP
Sequences:
>Translated_215_residues MRTDVRNCRPWRITAKTTASRLLAVALALAAGGAQAGMYRWVDGNGRVQYSDTPPTTFQTSGGVEMSKQGNVVRRTQSEA ERRAEAERVAEQKRVAKIQQRQAQLDRALMSTYTSEAEIDLARDRALEHHKLAIKGARIRAETVERNLAELRARIAGIEK AGRPVGPGLKDQLAQAGRESADLAHTVDSNEEAMTKVREKYAADKARFRELTGQP >Mature_215_residues MRTDVRNCRPWRITAKTTASRLLAVALALAAGGAQAGMYRWVDGNGRVQYSDTPPTTFQTSGGVEMSKQGNVVRRTQSEA ERRAEAERVAEQKRVAKIQQRQAQLDRALMSTYTSEAEIDLARDRALEHHKLAIKGARIRAETVERNLAELRARIAGIEK AGRPVGPGLKDQLAQAGRESADLAHTVDSNEEAMTKVREKYAADKARFRELTGQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23780; Mature: 23780
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTDVRNCRPWRITAKTTASRLLAVALALAAGGAQAGMYRWVDGNGRVQYSDTPPTTFQT CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEECCCCCCEEEC SGGVEMSKQGNVVRRTQSEAERRAEAERVAEQKRVAKIQQRQAQLDRALMSTYTSEAEID CCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH LARDRALEHHKLAIKGARIRAETVERNLAELRARIAGIEKAGRPVGPGLKDQLAQAGRES HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHH ADLAHTVDSNEEAMTKVREKYAADKARFRELTGQP HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRTDVRNCRPWRITAKTTASRLLAVALALAAGGAQAGMYRWVDGNGRVQYSDTPPTTFQT CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEECCCCCCEEEC SGGVEMSKQGNVVRRTQSEAERRAEAERVAEQKRVAKIQQRQAQLDRALMSTYTSEAEID CCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH LARDRALEHHKLAIKGARIRAETVERNLAELRARIAGIEKAGRPVGPGLKDQLAQAGRES HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHH ADLAHTVDSNEEAMTKVREKYAADKARFRELTGQP HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA