Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316254

Identifier: 74316254

GI number: 74316254

Start: 259697

End: 260728

Strand: Reverse

Name: 74316254

Synonym: Tbd_0236

Alternate gene names: NA

Gene position: 260728-259697 (Counterclockwise)

Preceding gene: 74316255

Following gene: 74316252

Centisome position: 8.96

GC content: 69.57

Gene sequence:

>1032_bases
ATGAGCGACCCGCTTGAATCGTGGCATGAAGAAAAGCGTTCGGCCTGGCTTTACCGGGTCGTCGCCGAATGCGAGCAGGG
CACGCCGCGCGCGGCGCTGTTCGGTGAACTCGCGCAGGCCGCCGACGACCAGGCGGAAATCTGGTTGCGCGTCCTCGCTG
CGGACGGCGCGCCGCCCCCCGCGCCCTTCCGCCCCGACCTGCGCACCCGCGTCGTCGCGTCCCTGACGCGTCTGTTCACG
CCGCGTGCGATGCACGGTGTACTCGCCGCGATGAAGGTGCGCGGCATGAGTCTGTATACGCAGCACGCGCCGCACGCGAC
ACCGTCCAAACGCGACGATATCGGCAAGCGCCACCGCACCGGCGCCGCCGGCAACGCCCTGCGTGCCGGCGTGTTCGGGG
TCAACGACGGGCTGGTCTCCAACGCCGCGCTGATTTACGGCGTCGCCGGCGCCGCGCAGGCGTCCGAGGTCATTCTGCTG
ACCGGCGTCGCCGGCCTGCTCGCCGGTGCGTTTTCGATGGCCGCCGGCGAATACGTGTCGATGCGCTCGCAGCGCGAGAT
GTTCGAGTATCAAATCGGCCTCGAACGCGACGAACTGGAAAAGTATCCTGCCGAAGAAGCGGCCGAACTCGCGCTGATCT
ATGCCGCCAAGGGCATGCCCGAAGGCGAGGCGAAGCGGGTCGCCGACACGCTGATGGAGAACCCGGAGCGCGCGCTCGAC
ACGCTTGCGCGCGAGGAACTCGGCCTCAACCCCGACGAACTGGGCTCGCCGTGGACCGCGGCCTTGGCGTCGTTCGCCGC
GTTCAGCGTTGGTGCCGCGGTACCCCTGCTCCCGTTCCTGCTCGGCGCCGGCAATTCGCTCGCGCTATCGGTCGCGTTCA
CGGCGCTGGGGCTTTTCGCCGTCGGCGCGAGCATGAGCCTTTTCACCGGACGCCGCGCGCCGCTGAGCGGCTTGCGCATG
CTCGCGATCGGCGGCGGCGCCGGGCTCGCGACGTATTTCATCGGCGCCTGGCTGGGGGTGACGCTGGGCTGA

Upstream 100 bases:

>100_bases
ACCGCGTGCTCCGGCTCGCGCGCAGCGTCGCGGATCTCGCGGGCAGCGACGCGATCACCACGACCCACCTCGCCGAGGCG
ATCCAATACCGGCGACAGGC

Downstream 100 bases:

>100_bases
ATCGCCGGCGGCTGGCCGCGAACGCAGGCGACCAGCAAGCAGACGGGAGCAACGAGCAGAGGGAATTCGCGGTGACCGCG
GCGCCTCAGGTCTGCTCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: Nodulin; Nodulin Protein; Iron And Manganese Transporter; Nodulin- Domain-Containing Protein; Ferritin-Like Domain Fused ; Mebrane Associated Protein DUF

Number of amino acids: Translated: 343; Mature: 342

Protein sequence:

>343_residues
MSDPLESWHEEKRSAWLYRVVAECEQGTPRAALFGELAQAADDQAEIWLRVLAADGAPPPAPFRPDLRTRVVASLTRLFT
PRAMHGVLAAMKVRGMSLYTQHAPHATPSKRDDIGKRHRTGAAGNALRAGVFGVNDGLVSNAALIYGVAGAAQASEVILL
TGVAGLLAGAFSMAAGEYVSMRSQREMFEYQIGLERDELEKYPAEEAAELALIYAAKGMPEGEAKRVADTLMENPERALD
TLAREELGLNPDELGSPWTAALASFAAFSVGAAVPLLPFLLGAGNSLALSVAFTALGLFAVGASMSLFTGRRAPLSGLRM
LAIGGGAGLATYFIGAWLGVTLG

Sequences:

>Translated_343_residues
MSDPLESWHEEKRSAWLYRVVAECEQGTPRAALFGELAQAADDQAEIWLRVLAADGAPPPAPFRPDLRTRVVASLTRLFT
PRAMHGVLAAMKVRGMSLYTQHAPHATPSKRDDIGKRHRTGAAGNALRAGVFGVNDGLVSNAALIYGVAGAAQASEVILL
TGVAGLLAGAFSMAAGEYVSMRSQREMFEYQIGLERDELEKYPAEEAAELALIYAAKGMPEGEAKRVADTLMENPERALD
TLAREELGLNPDELGSPWTAALASFAAFSVGAAVPLLPFLLGAGNSLALSVAFTALGLFAVGASMSLFTGRRAPLSGLRM
LAIGGGAGLATYFIGAWLGVTLG
>Mature_342_residues
SDPLESWHEEKRSAWLYRVVAECEQGTPRAALFGELAQAADDQAEIWLRVLAADGAPPPAPFRPDLRTRVVASLTRLFTP
RAMHGVLAAMKVRGMSLYTQHAPHATPSKRDDIGKRHRTGAAGNALRAGVFGVNDGLVSNAALIYGVAGAAQASEVILLT
GVAGLLAGAFSMAAGEYVSMRSQREMFEYQIGLERDELEKYPAEEAAELALIYAAKGMPEGEAKRVADTLMENPERALDT
LAREELGLNPDELGSPWTAALASFAAFSVGAAVPLLPFLLGAGNSLALSVAFTALGLFAVGASMSLFTGRRAPLSGLRML
AIGGGAGLATYFIGAWLGVTLG

Specific function: Unknown

COG id: COG1814

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36127; Mature: 35996

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDPLESWHEEKRSAWLYRVVAECEQGTPRAALFGELAQAADDQAEIWLRVLAADGAPPP
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC
APFRPDLRTRVVASLTRLFTPRAMHGVLAAMKVRGMSLYTQHAPHATPSKRDDIGKRHRT
CCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCHHHHHHHHCC
GAAGNALRAGVFGVNDGLVSNAALIYGVAGAAQASEVILLTGVAGLLAGAFSMAAGEYVS
CCCCCHHHHCCCCCCCCHHHCCHHEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHH
MRSQREMFEYQIGLERDELEKYPAEEAAELALIYAAKGMPEGEAKRVADTLMENPERALD
HHHHHHHHHHHCCCCHHHHHHCCHHHHHHEEHHHHHCCCCCHHHHHHHHHHHHCHHHHHH
TLAREELGLNPDELGSPWTAALASFAAFSVGAAVPLLPFLLGAGNSLALSVAFTALGLFA
HHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
VGASMSLFTGRRAPLSGLRMLAIGGGAGLATYFIGAWLGVTLG
HHCHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SDPLESWHEEKRSAWLYRVVAECEQGTPRAALFGELAQAADDQAEIWLRVLAADGAPPP
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC
APFRPDLRTRVVASLTRLFTPRAMHGVLAAMKVRGMSLYTQHAPHATPSKRDDIGKRHRT
CCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCHHHHHHHHCC
GAAGNALRAGVFGVNDGLVSNAALIYGVAGAAQASEVILLTGVAGLLAGAFSMAAGEYVS
CCCCCHHHHCCCCCCCCHHHCCHHEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHH
MRSQREMFEYQIGLERDELEKYPAEEAAELALIYAAKGMPEGEAKRVADTLMENPERALD
HHHHHHHHHHHCCCCHHHHHHCCHHHHHHEEHHHHHCCCCCHHHHHHHHHHHHCHHHHHH
TLAREELGLNPDELGSPWTAALASFAAFSVGAAVPLLPFLLGAGNSLALSVAFTALGLFA
HHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
VGASMSLFTGRRAPLSGLRMLAIGGGAGLATYFIGAWLGVTLG
HHCHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA