| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316236
Identifier: 74316236
GI number: 74316236
Start: 238815
End: 239243
Strand: Reverse
Name: 74316236
Synonym: Tbd_0218
Alternate gene names: NA
Gene position: 239243-238815 (Counterclockwise)
Preceding gene: 74316237
Following gene: 74316233
Centisome position: 8.22
GC content: 69.0
Gene sequence:
>429_bases ATGCCCGCTTGCCCGCTATGCGACACCCCGGGCGGGACGATCCTGTGGCAGGACGATTTCTGCCGCGTCGTCCTCGCCGA CGAGCCGGACTATCCCGGCTTCCTCCGCGTGATCCTCGCCGCCCACGTGAAGGAAATGAGCGATCTCGCGCCAGCCGACC AGCAGCGCCTGCTGCAGGTCGTACTCGCGACCGAAGCCGCGCTGCGCGAGGTCGTGGCGCCCCACAAGGTCAATCTCGCC TCGCTCGGCAACCTGGTGCCGCATCTGCACTGGCATGTGATCCCGCGTTTTACCGACGACCCGCATTTCCCGAATGCGGT GTGGGGCGTGAGGCAACGGGATACGCCGCGCGCCGCAGCGCCCGACCTGGACGCGCGGCTTGGCGCGGCGCTCAGGCGGC GCCTTGGTCGCGCGCAGGAAACGGAATGA
Upstream 100 bases:
>100_bases GGCGCTGGTCGGTGGCGGGCACGCCGGCGATACTCCTAAGGCTTGCCAGTCCTGTTCACGCCCCGCATGATGCGGGGCGT TTTGTTTGTGGAGTCCCGAC
Downstream 100 bases:
>100_bases CTTGGGCGTTCTCGGGCGCCGCGAGGACGCGCTGAGCCGGGAAGATCGCGGAGAAGGCGCTACCGCGCCCGGGTGTCGAC TGGATGTCGAGACGCGCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: Histidine Triad Family Protein; HIT Family Hydrolase; HIT Family Protein; Diadenosine Tetraphosphate Hydrolase; Histidine Triad-Like; Histidine Triad Family Hydrolase; HIT Hydrolase; Histidine Triad Domain Protein; HIT Domain-Containing Protein; HIT Domain-Containing
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MPACPLCDTPGGTILWQDDFCRVVLADEPDYPGFLRVILAAHVKEMSDLAPADQQRLLQVVLATEAALREVVAPHKVNLA SLGNLVPHLHWHVIPRFTDDPHFPNAVWGVRQRDTPRAAAPDLDARLGAALRRRLGRAQETE
Sequences:
>Translated_142_residues MPACPLCDTPGGTILWQDDFCRVVLADEPDYPGFLRVILAAHVKEMSDLAPADQQRLLQVVLATEAALREVVAPHKVNLA SLGNLVPHLHWHVIPRFTDDPHFPNAVWGVRQRDTPRAAAPDLDARLGAALRRRLGRAQETE >Mature_141_residues PACPLCDTPGGTILWQDDFCRVVLADEPDYPGFLRVILAAHVKEMSDLAPADQQRLLQVVLATEAALREVVAPHKVNLAS LGNLVPHLHWHVIPRFTDDPHFPNAVWGVRQRDTPRAAAPDLDARLGAALRRRLGRAQETE
Specific function: Unknown
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15735; Mature: 15604
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPACPLCDTPGGTILWQDDFCRVVLADEPDYPGFLRVILAAHVKEMSDLAPADQQRLLQV CCCCCCCCCCCCEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH VLATEAALREVVAPHKVNLASLGNLVPHLHWHVIPRFTDDPHFPNAVWGVRQRDTPRAAA HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCHHCCCCCCCCCCCCC PDLDARLGAALRRRLGRAQETE CCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PACPLCDTPGGTILWQDDFCRVVLADEPDYPGFLRVILAAHVKEMSDLAPADQQRLLQV CCCCCCCCCCCEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH VLATEAALREVVAPHKVNLASLGNLVPHLHWHVIPRFTDDPHFPNAVWGVRQRDTPRAAA HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCHHCCCCCCCCCCCCC PDLDARLGAALRRRLGRAQETE CCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA