Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316213

Identifier: 74316213

GI number: 74316213

Start: 206569

End: 209364

Strand: Reverse

Name: 74316213

Synonym: Tbd_0195

Alternate gene names: NA

Gene position: 209364-206569 (Counterclockwise)

Preceding gene: 74316214

Following gene: 74316212

Centisome position: 7.2

GC content: 67.13

Gene sequence:

>2796_bases
ATGACTCGACATCCCGCTCCCCTGATTGCGTCGCTGCTGGTCCTGGCCTTTTGCGCGCCGCTCGCCGGCTGCGATCCCAC
GGCCGGACTCAGCGCCCAGGAACACGTCCAGCGCGCCAAGGACTTCGAGGACAAGGGCGACCTCAAGGGCAGCGTCATCG
AACTGAAGAACGCGATCCAGAAGAATCCCGACAGCGCCGAAGCCCGGCTCCTGCTGGGACAGGTCTACCTCAAGGCGGGC
TTCGGCGCCGAAGCGGAAAAGGAACTTCGACAAGCCGAGCGGCTCGGCGTCGGCCGCGCCACCCTCGAGCCCCTGCTCGG
GGAAGCCCTGCTGCTGATGGGCGAGTACGCGCGCGTCCTCGACGAAATCCAGCCGGACACGCAGGGACCGAAGGAGCGCC
TGTCGCGCATCCTGCAACTGCGTGGCGAGGCCCTGCTGAACCAGCGGAAACTGGAGGAGGCGTGCAATCTGTTCCAGCAG
TCCTACGATGCCTCGCCCGGCAACCCGCCCACCTACTGGGGCCTTTCGCGCTGCGCGCTGGCAACGGGTGACGCGGCGAA
GGCGCGCGACTGGCTTGAACGCGCGCTCAAGCTCGAGCACAAGCGCGCCCGCACCTGGATTCACCTCGGCAACCTCGAAT
TGGCCGGCAAGGATACGGCGAAGGCGCTCGCTGCCTATTCGAAGGCTGTGAAGATCGAACCGAACAATCTGGATGCGCTG
CAGAGTCTGGTCGCGATTCACGTCAAGGCGGGAGACACCCAGCGCGCGCGCGAGTACTTGGCCGTGATCAGGAAGCTCGC
GCCCAAATCGACCCGCGCACATTACCTCGAGGCGTCGATCGCCTACAGCGAGAAGAAATTCGCCGAGGCAAACGCCGCGA
TTCAGGAAGCCCTGAAAGTCTCGCCCGACCATGTTCCGAGCCTGATGCTCGCCGGCATGAGCGCCCATGCGCTCGGCTCC
TACCAGGAGGCGGAAACGTATTTCAAGCGCTTTCTGCTGCGGGTTCCCGGCCACGCGGAAGGGCTCAAGATGCTTGCGAC
GACGCAAATCAAGTCGAAGCAATTCGACAAGGCGCTCGTCACGCTCGCCCCTTTCCTCGCCCCCGGGGTGCGGGATGCAC
AGGGTCTGGCGCTGGCGGGCGAAGCGCAGATGGCCAACGGCAACCCGAGCCAGGCCGCGGCGCTCTTCGAACGCGCGCTC
GCGCTCGAACCCGGCAACGTCACGATACGTACGCAGCTCGGCCTGAGTCAGCTCGCCGCCGGGAACACGCAAGACGCCAT
CGACGAGTTGACCGATGCCTCACAGCATTCTTCGGGCTCCCAGGCGGACACGCTGCTTGCGGTCGCCTATCTGAGCCGCA
AGGATTACGACCGCGCACTCGCCGCGCTTGCGACCCTACAGAAAAAAGGCGACGCCAGCGCGAAAATCCATCACCTGGCC
GGGCAGGCCTACCTCGGCAAGAACGACAAGCTTGCCGCCCGCCGTAATTTCGAACAGGCGCTCGCCGCCGACGCGGCGTT
CTTCCCCGCGGTCGCCAGCCTCGCGCAGCTCGACGTGGCCGAGAACAAGGCGGACGCGGCCCGCATGCGTCTCGAGCGCG
CGCTCGCCCAGGACAAGAACCGGGTCGCCGCGATGCTCGCGCTCTCGCGGATGGCTGCCCGCAATGGTCAGGAGCAGGCC
TCGATCGACTGGCTCGAGAAAGCCGCCCGCGCCGACGGCAAGGCGATACAGCCGCGCATCGAACTGGTACGGCATTACCT
GGCCCGCAACGAGGGCCAGAAGGCGCTCGCCCTGGCCAACGAGGCGGTCCGCGCCAACCCCGACCACCCTGCCGCGCTCA
ACCTGCTCGGCACGGTGCAACTCGCGCTCGACGACAAGGCGAGTTCGGCGAGCACCTTCAGCCGGCTTACCCGGGAGACT
AGGCAGTCGCCGGAAGGCTTCGTGCGTCTCGCGCAGGTGCAGCTGGCCGACGGTAAACTCGACGAAGCGCGCCGCAACCT
GCTGCACGCGCTGGAACTCGCGCCGGGACATCTCAAAAGCCAGGAGGCATTGATCAAGCTGGAACTCGCCGCCAAGCGCC
CCGAGGCCGCGCTTCTCGTCGCGCGCGACATCCAGAAGGGCCACCCCGATTCCGCCGTCGGCTTCGTACGCGAAGGCGAC
ATTCTGCTCGCCGAAAAACGCATCGCGCAGGCTGTGCCGGCCTACGTCCGCGCGCTGGAACATGGCGCCGGGCCGGCTGT
GCTGGTCCAGTTCCACCGAGCGACCGTCCTCTCGGGGCAGAACCGTGCGGCGGCCGACCGCCGGCTCGAGGACTGGATCC
GGCAGCATCCGAAGGACAGCGGCGTCGCCGCATACGCAGCCGGGTACTACCTTGTCACCGGGCAAAGCGCGCGCGCTGCG
GAGACTTATCGGCAGATCCTGAAGCACGAACCACGCAACGTCATGATCCTGAACAATCTCGCCAGCCTCTATCTGCAGCA
GCGAGACCCGCGCGCGCTCGAGCTCGCGACCCAGGCCAACCGACTCGCGCCGACCAACCCGGCCGTCCAGGACACCCTGG
GCTGGGTTCTGGTCGAACAAGGCCAGGCCCGGCGCGGACTCGGGTACCTGCGCAAGGCGATGGCCCAGACACCGAAGAAC
GCGAGCCTGCGCTACCACCACGCGGTGGCGCTCGCCCGCACCGGAGACCGCCCAGGTGCGCGCAAGCTGCTCGAGCAGCT
GCTCGCCGAAACGCCGCGCTTCGAGGAACGCGCTGCGGCGGAGACCCTACTCAAGAGCCTGCCGGCTGCTTCCTGA

Upstream 100 bases:

>100_bases
CGACGCGCTTTCCCCAGGAACAGGAAGCGCGTGAATTGCTCGCCCGGCTGCGCAACAAAAAGAGCTAGACTGCCGCCCAC
CCCTCGCCCAAGGTAGCCCC

Downstream 100 bases:

>100_bases
GCGCGCGTCGCGGGCCGAAAGCACGCGCGTCGGAAAACTTTACTCGGGCGCTTTCTTTACCCCCTAGGCCTCGCCCCAGC
AGGCACACAACGCATTGTTT

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: PEP-CTERM System TPR-Repeat Lipoprotein; Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; TPR Domain Protein; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Repeat Family; TPR Repeat Protein; Tetratricopeptide TPR_4 Containing Protein

Number of amino acids: Translated: 931; Mature: 930

Protein sequence:

>931_residues
MTRHPAPLIASLLVLAFCAPLAGCDPTAGLSAQEHVQRAKDFEDKGDLKGSVIELKNAIQKNPDSAEARLLLGQVYLKAG
FGAEAEKELRQAERLGVGRATLEPLLGEALLLMGEYARVLDEIQPDTQGPKERLSRILQLRGEALLNQRKLEEACNLFQQ
SYDASPGNPPTYWGLSRCALATGDAAKARDWLERALKLEHKRARTWIHLGNLELAGKDTAKALAAYSKAVKIEPNNLDAL
QSLVAIHVKAGDTQRAREYLAVIRKLAPKSTRAHYLEASIAYSEKKFAEANAAIQEALKVSPDHVPSLMLAGMSAHALGS
YQEAETYFKRFLLRVPGHAEGLKMLATTQIKSKQFDKALVTLAPFLAPGVRDAQGLALAGEAQMANGNPSQAAALFERAL
ALEPGNVTIRTQLGLSQLAAGNTQDAIDELTDASQHSSGSQADTLLAVAYLSRKDYDRALAALATLQKKGDASAKIHHLA
GQAYLGKNDKLAARRNFEQALAADAAFFPAVASLAQLDVAENKADAARMRLERALAQDKNRVAAMLALSRMAARNGQEQA
SIDWLEKAARADGKAIQPRIELVRHYLARNEGQKALALANEAVRANPDHPAALNLLGTVQLALDDKASSASTFSRLTRET
RQSPEGFVRLAQVQLADGKLDEARRNLLHALELAPGHLKSQEALIKLELAAKRPEAALLVARDIQKGHPDSAVGFVREGD
ILLAEKRIAQAVPAYVRALEHGAGPAVLVQFHRATVLSGQNRAAADRRLEDWIRQHPKDSGVAAYAAGYYLVTGQSARAA
ETYRQILKHEPRNVMILNNLASLYLQQRDPRALELATQANRLAPTNPAVQDTLGWVLVEQGQARRGLGYLRKAMAQTPKN
ASLRYHHAVALARTGDRPGARKLLEQLLAETPRFEERAAAETLLKSLPAAS

Sequences:

>Translated_931_residues
MTRHPAPLIASLLVLAFCAPLAGCDPTAGLSAQEHVQRAKDFEDKGDLKGSVIELKNAIQKNPDSAEARLLLGQVYLKAG
FGAEAEKELRQAERLGVGRATLEPLLGEALLLMGEYARVLDEIQPDTQGPKERLSRILQLRGEALLNQRKLEEACNLFQQ
SYDASPGNPPTYWGLSRCALATGDAAKARDWLERALKLEHKRARTWIHLGNLELAGKDTAKALAAYSKAVKIEPNNLDAL
QSLVAIHVKAGDTQRAREYLAVIRKLAPKSTRAHYLEASIAYSEKKFAEANAAIQEALKVSPDHVPSLMLAGMSAHALGS
YQEAETYFKRFLLRVPGHAEGLKMLATTQIKSKQFDKALVTLAPFLAPGVRDAQGLALAGEAQMANGNPSQAAALFERAL
ALEPGNVTIRTQLGLSQLAAGNTQDAIDELTDASQHSSGSQADTLLAVAYLSRKDYDRALAALATLQKKGDASAKIHHLA
GQAYLGKNDKLAARRNFEQALAADAAFFPAVASLAQLDVAENKADAARMRLERALAQDKNRVAAMLALSRMAARNGQEQA
SIDWLEKAARADGKAIQPRIELVRHYLARNEGQKALALANEAVRANPDHPAALNLLGTVQLALDDKASSASTFSRLTRET
RQSPEGFVRLAQVQLADGKLDEARRNLLHALELAPGHLKSQEALIKLELAAKRPEAALLVARDIQKGHPDSAVGFVREGD
ILLAEKRIAQAVPAYVRALEHGAGPAVLVQFHRATVLSGQNRAAADRRLEDWIRQHPKDSGVAAYAAGYYLVTGQSARAA
ETYRQILKHEPRNVMILNNLASLYLQQRDPRALELATQANRLAPTNPAVQDTLGWVLVEQGQARRGLGYLRKAMAQTPKN
ASLRYHHAVALARTGDRPGARKLLEQLLAETPRFEERAAAETLLKSLPAAS
>Mature_930_residues
TRHPAPLIASLLVLAFCAPLAGCDPTAGLSAQEHVQRAKDFEDKGDLKGSVIELKNAIQKNPDSAEARLLLGQVYLKAGF
GAEAEKELRQAERLGVGRATLEPLLGEALLLMGEYARVLDEIQPDTQGPKERLSRILQLRGEALLNQRKLEEACNLFQQS
YDASPGNPPTYWGLSRCALATGDAAKARDWLERALKLEHKRARTWIHLGNLELAGKDTAKALAAYSKAVKIEPNNLDALQ
SLVAIHVKAGDTQRAREYLAVIRKLAPKSTRAHYLEASIAYSEKKFAEANAAIQEALKVSPDHVPSLMLAGMSAHALGSY
QEAETYFKRFLLRVPGHAEGLKMLATTQIKSKQFDKALVTLAPFLAPGVRDAQGLALAGEAQMANGNPSQAAALFERALA
LEPGNVTIRTQLGLSQLAAGNTQDAIDELTDASQHSSGSQADTLLAVAYLSRKDYDRALAALATLQKKGDASAKIHHLAG
QAYLGKNDKLAARRNFEQALAADAAFFPAVASLAQLDVAENKADAARMRLERALAQDKNRVAAMLALSRMAARNGQEQAS
IDWLEKAARADGKAIQPRIELVRHYLARNEGQKALALANEAVRANPDHPAALNLLGTVQLALDDKASSASTFSRLTRETR
QSPEGFVRLAQVQLADGKLDEARRNLLHALELAPGHLKSQEALIKLELAAKRPEAALLVARDIQKGHPDSAVGFVREGDI
LLAEKRIAQAVPAYVRALEHGAGPAVLVQFHRATVLSGQNRAAADRRLEDWIRQHPKDSGVAAYAAGYYLVTGQSARAAE
TYRQILKHEPRNVMILNNLASLYLQQRDPRALELATQANRLAPTNPAVQDTLGWVLVEQGQARRGLGYLRKAMAQTPKNA
SLRYHHAVALARTGDRPGARKLLEQLLAETPRFEERAAAETLLKSLPAAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 100959; Mature: 100828

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRHPAPLIASLLVLAFCAPLAGCDPTAGLSAQEHVQRAKDFEDKGDLKGSVIELKNAIQ
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
KNPDSAEARLLLGQVYLKAGFGAEAEKELRQAERLGVGRATLEPLLGEALLLMGEYARVL
CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
DEIQPDTQGPKERLSRILQLRGEALLNQRKLEEACNLFQQSYDASPGNPPTYWGLSRCAL
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
ATGDAAKARDWLERALKLEHKRARTWIHLGNLELAGKDTAKALAAYSKAVKIEPNNLDAL
CCCCHHHHHHHHHHHHHHHHHHHHHEEEECCEEECCCHHHHHHHHHHHHEEECCCCHHHH
QSLVAIHVKAGDTQRAREYLAVIRKLAPKSTRAHYLEASIAYSEKKFAEANAAIQEALKV
HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SPDHVPSLMLAGMSAHALGSYQEAETYFKRFLLRVPGHAEGLKMLATTQIKSKQFDKALV
CCCHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
TLAPFLAPGVRDAQGLALAGEAQMANGNPSQAAALFERALALEPGNVTIRTQLGLSQLAA
HHHHHHCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHC
GNTQDAIDELTDASQHSSGSQADTLLAVAYLSRKDYDRALAALATLQKKGDASAKIHHLA
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
GQAYLGKNDKLAARRNFEQALAADAAFFPAVASLAQLDVAENKADAARMRLERALAQDKN
CCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
RVAAMLALSRMAARNGQEQASIDWLEKAARADGKAIQPRIELVRHYLARNEGQKALALAN
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH
EAVRANPDHPAALNLLGTVQLALDDKASSASTFSRLTRETRQSPEGFVRLAQVQLADGKL
HHHCCCCCCCHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCH
DEARRNLLHALELAPGHLKSQEALIKLELAAKRPEAALLVARDIQKGHPDSAVGFVREGD
HHHHHHHHHHHHCCCCCCCCCHHHEEEEECCCCCCHHHHHHHHHHCCCCCCHHCEEECCC
ILLAEKRIAQAVPAYVRALEHGAGPAVLVQFHRATVLSGQNRAAADRRLEDWIRQHPKDS
EEEHHHHHHHHHHHHHHHHHCCCCCEEEHEEHHHHHHCCCCHHHHHHHHHHHHHHCCCCC
GVAAYAAGYYLVTGQSARAAETYRQILKHEPRNVMILNNLASLYLQQRDPRALELATQAN
CCEEEECCEEEEECCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHC
RLAPTNPAVQDTLGWVLVEQGQARRGLGYLRKAMAQTPKNASLRYHHAVALARTGDRPGA
CCCCCCCCHHHHHHHHEECCCCCCCCHHHHHHHHHCCCCCCCEEEHHHEEEEECCCCCCH
RKLLEQLLAETPRFEERAAAETLLKSLPAAS
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TRHPAPLIASLLVLAFCAPLAGCDPTAGLSAQEHVQRAKDFEDKGDLKGSVIELKNAIQ
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
KNPDSAEARLLLGQVYLKAGFGAEAEKELRQAERLGVGRATLEPLLGEALLLMGEYARVL
CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
DEIQPDTQGPKERLSRILQLRGEALLNQRKLEEACNLFQQSYDASPGNPPTYWGLSRCAL
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
ATGDAAKARDWLERALKLEHKRARTWIHLGNLELAGKDTAKALAAYSKAVKIEPNNLDAL
CCCCHHHHHHHHHHHHHHHHHHHHHEEEECCEEECCCHHHHHHHHHHHHEEECCCCHHHH
QSLVAIHVKAGDTQRAREYLAVIRKLAPKSTRAHYLEASIAYSEKKFAEANAAIQEALKV
HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SPDHVPSLMLAGMSAHALGSYQEAETYFKRFLLRVPGHAEGLKMLATTQIKSKQFDKALV
CCCHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
TLAPFLAPGVRDAQGLALAGEAQMANGNPSQAAALFERALALEPGNVTIRTQLGLSQLAA
HHHHHHCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHC
GNTQDAIDELTDASQHSSGSQADTLLAVAYLSRKDYDRALAALATLQKKGDASAKIHHLA
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
GQAYLGKNDKLAARRNFEQALAADAAFFPAVASLAQLDVAENKADAARMRLERALAQDKN
CCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
RVAAMLALSRMAARNGQEQASIDWLEKAARADGKAIQPRIELVRHYLARNEGQKALALAN
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH
EAVRANPDHPAALNLLGTVQLALDDKASSASTFSRLTRETRQSPEGFVRLAQVQLADGKL
HHHCCCCCCCHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCH
DEARRNLLHALELAPGHLKSQEALIKLELAAKRPEAALLVARDIQKGHPDSAVGFVREGD
HHHHHHHHHHHHCCCCCCCCCHHHEEEEECCCCCCHHHHHHHHHHCCCCCCHHCEEECCC
ILLAEKRIAQAVPAYVRALEHGAGPAVLVQFHRATVLSGQNRAAADRRLEDWIRQHPKDS
EEEHHHHHHHHHHHHHHHHHCCCCCEEEHEEHHHHHHCCCCHHHHHHHHHHHHHHCCCCC
GVAAYAAGYYLVTGQSARAAETYRQILKHEPRNVMILNNLASLYLQQRDPRALELATQAN
CCEEEECCEEEEECCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHC
RLAPTNPAVQDTLGWVLVEQGQARRGLGYLRKAMAQTPKNASLRYHHAVALARTGDRPGA
CCCCCCCCHHHHHHHHEECCCCCCCCHHHHHHHHHCCCCCCCEEEHHHEEEEECCCCCCH
RKLLEQLLAETPRFEERAAAETLLKSLPAAS
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA