| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316208
Identifier: 74316208
GI number: 74316208
Start: 202715
End: 203497
Strand: Direct
Name: 74316208
Synonym: Tbd_0190
Alternate gene names: NA
Gene position: 202715-203497 (Clockwise)
Preceding gene: 74316207
Following gene: 74316209
Centisome position: 6.97
GC content: 59.13
Gene sequence:
>783_bases GTGACGCTGGATTTGCAAAAACTGATCGGGCGCGGCCGAAGCGTCGCGGATGACTTCGATCGAACCATCATCAGCTTCGA GTCGCCTTACCGCCTCAAGGACCTGAGCCCTGTTTCCGGAAGCGATCCCGAGACGCAGGAAGAAGGTCTGGGCGAAAAGC TCTTCAAGCTGCGCTTCGCCCAGCACGACGAGGTGTTCAACAACGCCAGCATGCTCGTGCAAAAGCGCTACGCCTGGCGC GGCTTCCCCAAGGCCCAGCTCAAGAAGTATCCGAACCGCATCACGATCCTGTCGTTTCACCAGGAAAAGATCGTCGGCAC GGTCACGGTCGGCTACGACTCCGAAGAGGGCATGCTGGTCGACGAGATATACAAGCCGGAAATCGACGCGTTGCGCGCGC AGGGCAGGAAGGTCGGCGAACTCAGCAAGCTCGCGATCGACGAGAACATCGGTTCCAAGCAGTTGCTCGCGAGCCTGATC CACATCGCCTATTTATATGGCGTCATCCACGACTGCACCGACGCGATCATCGAGATCGTGCCGCGCCACAAGGCCTTCTA CGAGCGAATGCTCGGCTTCAAGCAGATCGGCGAGGAACGCATGAACAACCGGGTCAACTTTCCGGTCCTGCTGATGCATC TCGAGCTCGATTACATGCGGCAGAAAATCGAGGAATTCGGCGGCCAGGGCAAAGCGGCCAAGGATCGCAGCCTCTATCCC TACTTCTTCTCGGCCCGCGATCAGCAGGGGATTCTCGCCCGGCTGCTGAGGGAGGAAGGTTGA
Upstream 100 bases:
>100_bases CGACGCCGCGCGTTGGTTACGAAGCTAAATTTCGCTGCGCGGGGGGCCGATAAAAGCACGTGGGACCGCCTTTTCCAACT GACGAATCGGGAGTGGCAAG
Downstream 100 bases:
>100_bases CCGCAGGCGCTTTCGATTACGACGAGGCCTTCAGCCGCAACCTCGGCTGGCTGACGCCCGATGAACAGCGGACGCTGCGC GGCAAGAAGATCGCGATCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MTLDLQKLIGRGRSVADDFDRTIISFESPYRLKDLSPVSGSDPETQEEGLGEKLFKLRFAQHDEVFNNASMLVQKRYAWR GFPKAQLKKYPNRITILSFHQEKIVGTVTVGYDSEEGMLVDEIYKPEIDALRAQGRKVGELSKLAIDENIGSKQLLASLI HIAYLYGVIHDCTDAIIEIVPRHKAFYERMLGFKQIGEERMNNRVNFPVLLMHLELDYMRQKIEEFGGQGKAAKDRSLYP YFFSARDQQGILARLLREEG
Sequences:
>Translated_260_residues MTLDLQKLIGRGRSVADDFDRTIISFESPYRLKDLSPVSGSDPETQEEGLGEKLFKLRFAQHDEVFNNASMLVQKRYAWR GFPKAQLKKYPNRITILSFHQEKIVGTVTVGYDSEEGMLVDEIYKPEIDALRAQGRKVGELSKLAIDENIGSKQLLASLI HIAYLYGVIHDCTDAIIEIVPRHKAFYERMLGFKQIGEERMNNRVNFPVLLMHLELDYMRQKIEEFGGQGKAAKDRSLYP YFFSARDQQGILARLLREEG >Mature_259_residues TLDLQKLIGRGRSVADDFDRTIISFESPYRLKDLSPVSGSDPETQEEGLGEKLFKLRFAQHDEVFNNASMLVQKRYAWRG FPKAQLKKYPNRITILSFHQEKIVGTVTVGYDSEEGMLVDEIYKPEIDALRAQGRKVGELSKLAIDENIGSKQLLASLIH IAYLYGVIHDCTDAIIEIVPRHKAFYERMLGFKQIGEERMNNRVNFPVLLMHLELDYMRQKIEEFGGQGKAAKDRSLYPY FFSARDQQGILARLLREEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29865; Mature: 29734
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLDLQKLIGRGRSVADDFDRTIISFESPYRLKDLSPVSGSDPETQEEGLGEKLFKLRFA CCCCHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH QHDEVFNNASMLVQKRYAWRGFPKAQLKKYPNRITILSFHQEKIVGTVTVGYDSEEGMLV HHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEEEECCCCEEEEEEECCCCCCCCCH DEIYKPEIDALRAQGRKVGELSKLAIDENIGSKQLLASLIHIAYLYGVIHDCTDAIIEIV HHHHCCHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PRHKAFYERMLGFKQIGEERMNNRVNFPVLLMHLELDYMRQKIEEFGGQGKAAKDRSLYP HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCC YFFSARDQQGILARLLREEG CEECCCCCHHHHHHHHHHCC >Mature Secondary Structure TLDLQKLIGRGRSVADDFDRTIISFESPYRLKDLSPVSGSDPETQEEGLGEKLFKLRFA CCCHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH QHDEVFNNASMLVQKRYAWRGFPKAQLKKYPNRITILSFHQEKIVGTVTVGYDSEEGMLV HHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEEEECCCCEEEEEEECCCCCCCCCH DEIYKPEIDALRAQGRKVGELSKLAIDENIGSKQLLASLIHIAYLYGVIHDCTDAIIEIV HHHHCCHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PRHKAFYERMLGFKQIGEERMNNRVNFPVLLMHLELDYMRQKIEEFGGQGKAAKDRSLYP HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCC YFFSARDQQGILARLLREEG CEECCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA