Click here to switch to the map view.

The map label for this gene is yhcV [H]

Identifier: 74316108

GI number: 74316108

Start: 94422

End: 96311

Strand: Reverse

Name: yhcV [H]

Synonym: Tbd_0090

Alternate gene names: 74316108

Gene position: 96311-94422 (Counterclockwise)

Preceding gene: 74316109

Following gene: 74316107

Centisome position: 3.31

GC content: 65.87

Gene sequence:

>1890_bases
ATGTCAGAGGCTGTCAATTCGCTGGTCCAGGCGACCGTCGACCACCTCGCTCAGTTCGCCCCCTTCGATCAGATGGCACG
CGAGCACCTGCTCTGGATGGCCCGGCGATTGTCGCTCGGCTATTTCGCCCAGGGCGAGGTCATTCTTGCGCCCGAGCAGG
TCGCGCCGCTGCAGTTTTTCGTGATCAAGCAGGGGGTCGTGCAAGGTGAACAGGGCCGCGCGCAAACTACGGACGGCGCG
CCCTGGCTCGAGCTGCGCGAAGGCGAATGTTTCCCGCTCGGCGCGCTACTCGCCGAGCGCCCGGTCACGAGCGTCTACCG
CGCCGGCAGCGACGCCTTCTGCTACCAGCTCGCGGCAGCGGATTTCCTGCAGTTGACGCAGCTGAGCGAGCCCTTCAAGG
ATTTTTGTACGCGGCGGATCGCCAATCTGCTCGAGCATTCGCTGCGCCGGATTCACGCCGGCTACTCGAGGGCAAGCGCC
GAGCAGCAGTCGATGAGCAGCCGCCTCGCGGCCATCGTGCGCCGCGAGCCCGTGACCTGCTCGCCGCAAAGCTCGGTGCG
GCAGGCCTTGCAGTCGATGAAGACACAGGGCGTCGGGGCGATGGTCGCCGTCGAAAATGGCGTCCCGCGAGGCATCCTCA
CGCTTCACGACGTGTTGGACCGCGTCGCGCTCGCGGGCGCCGACCTCGAACGGCCCGTGATCGACATCATGAGCACGCAA
CTCACCACGCTGCCGCCGCACGCGCTTGCCCACGATGCGGCGCTGACCATGGCCAAGGAGGGCATCCGCCACGTTCTCGT
GACCGACAACGGCCGCCTCACCGGCGTGGTCTCGGAAAAGGATCTGTTCAGCCTGCAACGCGTTGGGCTCAGCGAAATCA
GCACGGCGATCCGTCACGCGCCCGATCTCGATCTGCTCAAGCAGAGCGCTCGCGACATCCAGCAGCTCTCGCGCAACATG
CTCGCGCAGGGCATCGCAGCCGAGCAGTTGACGCAGATCATCACCACGCTCAACGACCTGCTGACGACGCGTGTCATCGA
GCTCGAATTGCAGGAGAGTCCCGCCCGCGACATCGAATTCTGCTGGCTAGCGCTGGGCTCCGAGGGGCGCTTCGAGCAGA
CGCTGAACACCGATCAGGACAACGGCATCATCTTCGCGCCGAAGGCGGGCGAGTCGCCCACCGCGCAGCGCGAGGCGCTA
TTGCCCTTCGCCAAACGCGTCAACCTCGCGCTCGCCGAATGCGGGTTTCCGCTCTGCGGCGGCGAGGTCATGGCGTCGAA
TCCGAAGTGGTGCCTTTCGCTCGAGGAATGGCAGGACACCTTCGACCGCTGGATCTATCACGGCGCGCCGATGGACCTGC
TGCATGCGACGATCTTCTTCGATTTCCGTCCGCTCTACGGTGCGGTCGGTCTCGGCGTCGAATTGCGCGACTGGCTGCGC
GCCGCCGCACCGAAGAACTCGCGCTTCCTGCACCAGCTTGCGGTCAACGCCCTGCGCAACCGCCCGCCGCTCGGGGTCGT
GCGCGACTTCGTCACCGGCGACGATCACGCGGTCGACCTCAAGCTCAACGGCATCACCCCCTTCGTCGACGCTGCGCGCA
TCTTCAGTCTCGCGATCGGCGGCACGCAGACCAACACGCTCGAGCGCCTGCGCGAGATCGCGGCGCCGCTGAAGCTTGCC
AGCCGCGATGTCGACGCCTACTGCGAGGCCTTCCTCTTCATCCAGCTGTTGCGCCTGCGCCTTCACCACGGACAAAGCGA
ACAGGGTGCGTCGCTCGGCAACCGGGTCGACCCCGACACGCTCAACAATCTCGACAGCCGCATCCTCAAGGAAGCCTTCC
GCCAGGCGCGCAAGCTGCAGACCAAGCTCGGCCTGCACTACCAGGTATGA

Upstream 100 bases:

>100_bases
GGGCTTTTTCATGCACGCCACTCGCGCTTCTCGCCCAGCACCTTGCCGAGCGAAGCGTCGCCTGACGATAATGGGGCGAC
GACACGCCACAGGAGAGTCC

Downstream 100 bases:

>100_bases
ACTGGCTGGCGCCTCGCTTCGGCAGAAAACCGGAACTCTCGCCGCAGCAGGCCGCGCGTCTGGCCGCCTGGCGCGCGCTG
CCGTCGCCGCGCCACGATCT

Product: CBS signal-transduction protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 629; Mature: 628

Protein sequence:

>629_residues
MSEAVNSLVQATVDHLAQFAPFDQMAREHLLWMARRLSLGYFAQGEVILAPEQVAPLQFFVIKQGVVQGEQGRAQTTDGA
PWLELREGECFPLGALLAERPVTSVYRAGSDAFCYQLAAADFLQLTQLSEPFKDFCTRRIANLLEHSLRRIHAGYSRASA
EQQSMSSRLAAIVRREPVTCSPQSSVRQALQSMKTQGVGAMVAVENGVPRGILTLHDVLDRVALAGADLERPVIDIMSTQ
LTTLPPHALAHDAALTMAKEGIRHVLVTDNGRLTGVVSEKDLFSLQRVGLSEISTAIRHAPDLDLLKQSARDIQQLSRNM
LAQGIAAEQLTQIITTLNDLLTTRVIELELQESPARDIEFCWLALGSEGRFEQTLNTDQDNGIIFAPKAGESPTAQREAL
LPFAKRVNLALAECGFPLCGGEVMASNPKWCLSLEEWQDTFDRWIYHGAPMDLLHATIFFDFRPLYGAVGLGVELRDWLR
AAAPKNSRFLHQLAVNALRNRPPLGVVRDFVTGDDHAVDLKLNGITPFVDAARIFSLAIGGTQTNTLERLREIAAPLKLA
SRDVDAYCEAFLFIQLLRLRLHHGQSEQGASLGNRVDPDTLNNLDSRILKEAFRQARKLQTKLGLHYQV

Sequences:

>Translated_629_residues
MSEAVNSLVQATVDHLAQFAPFDQMAREHLLWMARRLSLGYFAQGEVILAPEQVAPLQFFVIKQGVVQGEQGRAQTTDGA
PWLELREGECFPLGALLAERPVTSVYRAGSDAFCYQLAAADFLQLTQLSEPFKDFCTRRIANLLEHSLRRIHAGYSRASA
EQQSMSSRLAAIVRREPVTCSPQSSVRQALQSMKTQGVGAMVAVENGVPRGILTLHDVLDRVALAGADLERPVIDIMSTQ
LTTLPPHALAHDAALTMAKEGIRHVLVTDNGRLTGVVSEKDLFSLQRVGLSEISTAIRHAPDLDLLKQSARDIQQLSRNM
LAQGIAAEQLTQIITTLNDLLTTRVIELELQESPARDIEFCWLALGSEGRFEQTLNTDQDNGIIFAPKAGESPTAQREAL
LPFAKRVNLALAECGFPLCGGEVMASNPKWCLSLEEWQDTFDRWIYHGAPMDLLHATIFFDFRPLYGAVGLGVELRDWLR
AAAPKNSRFLHQLAVNALRNRPPLGVVRDFVTGDDHAVDLKLNGITPFVDAARIFSLAIGGTQTNTLERLREIAAPLKLA
SRDVDAYCEAFLFIQLLRLRLHHGQSEQGASLGNRVDPDTLNNLDSRILKEAFRQARKLQTKLGLHYQV
>Mature_628_residues
SEAVNSLVQATVDHLAQFAPFDQMAREHLLWMARRLSLGYFAQGEVILAPEQVAPLQFFVIKQGVVQGEQGRAQTTDGAP
WLELREGECFPLGALLAERPVTSVYRAGSDAFCYQLAAADFLQLTQLSEPFKDFCTRRIANLLEHSLRRIHAGYSRASAE
QQSMSSRLAAIVRREPVTCSPQSSVRQALQSMKTQGVGAMVAVENGVPRGILTLHDVLDRVALAGADLERPVIDIMSTQL
TTLPPHALAHDAALTMAKEGIRHVLVTDNGRLTGVVSEKDLFSLQRVGLSEISTAIRHAPDLDLLKQSARDIQQLSRNML
AQGIAAEQLTQIITTLNDLLTTRVIELELQESPARDIEFCWLALGSEGRFEQTLNTDQDNGIIFAPKAGESPTAQREALL
PFAKRVNLALAECGFPLCGGEVMASNPKWCLSLEEWQDTFDRWIYHGAPMDLLHATIFFDFRPLYGAVGLGVELRDWLRA
AAPKNSRFLHQLAVNALRNRPPLGVVRDFVTGDDHAVDLKLNGITPFVDAARIFSLAIGGTQTNTLERLREIAAPLKLAS
RDVDAYCEAFLFIQLLRLRLHHGQSEQGASLGNRVDPDTLNNLDSRILKEAFRQARKLQTKLGLHYQV

Specific function: Unknown

COG id: COG2905

COG function: function code T; Predicted signal-transduction protein containing cAMP-binding and CBS domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644 [H]

Pfam domain/function: PF00571 CBS [H]

EC number: NA

Molecular weight: Translated: 69570; Mature: 69438

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEAVNSLVQATVDHLAQFAPFDQMAREHLLWMARRLSLGYFAQGEVILAPEQVAPLQFF
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEECCCEEECCCCCCCHHHH
VIKQGVVQGEQGRAQTTDGAPWLELREGECFPLGALLAERPVTSVYRAGSDAFCYQLAAA
HHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHCCHHHHHHCCCHHHHHHHHHH
DFLQLTQLSEPFKDFCTRRIANLLEHSLRRIHAGYSRASAEQQSMSSRLAAIVRREPVTC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SPQSSVRQALQSMKTQGVGAMVAVENGVPRGILTLHDVLDRVALAGADLERPVIDIMSTQ
CCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LTTLPPHALAHDAALTMAKEGIRHVLVTDNGRLTGVVSEKDLFSLQRVGLSEISTAIRHA
HCCCCCHHHHHHHHHHHHHHCCCEEEEECCCEEEEEECHHHHHHHHHCCHHHHHHHHHCC
PDLDLLKQSARDIQQLSRNMLAQGIAAEQLTQIITTLNDLLTTRVIELELQESPARDIEF
CCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEE
CWLALGSEGRFEQTLNTDQDNGIIFAPKAGESPTAQREALLPFAKRVNLALAECGFPLCG
EEEEECCCCCCHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
GEVMASNPKWCLSLEEWQDTFDRWIYHGAPMDLLHATIFFDFRPLYGAVGLGVELRDWLR
CCEEECCCCEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
AAAPKNSRFLHQLAVNALRNRPPLGVVRDFVTGDDHAVDLKLNGITPFVDAARIFSLAIG
HHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCC
GTQTNTLERLREIAAPLKLASRDVDAYCEAFLFIQLLRLRLHHGQSEQGASLGNRVDPDT
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH
LNNLDSRILKEAFRQARKLQTKLGLHYQV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SEAVNSLVQATVDHLAQFAPFDQMAREHLLWMARRLSLGYFAQGEVILAPEQVAPLQFF
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEECCCEEECCCCCCCHHHH
VIKQGVVQGEQGRAQTTDGAPWLELREGECFPLGALLAERPVTSVYRAGSDAFCYQLAAA
HHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHCCHHHHHHCCCHHHHHHHHHH
DFLQLTQLSEPFKDFCTRRIANLLEHSLRRIHAGYSRASAEQQSMSSRLAAIVRREPVTC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SPQSSVRQALQSMKTQGVGAMVAVENGVPRGILTLHDVLDRVALAGADLERPVIDIMSTQ
CCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LTTLPPHALAHDAALTMAKEGIRHVLVTDNGRLTGVVSEKDLFSLQRVGLSEISTAIRHA
HCCCCCHHHHHHHHHHHHHHCCCEEEEECCCEEEEEECHHHHHHHHHCCHHHHHHHHHCC
PDLDLLKQSARDIQQLSRNMLAQGIAAEQLTQIITTLNDLLTTRVIELELQESPARDIEF
CCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEE
CWLALGSEGRFEQTLNTDQDNGIIFAPKAGESPTAQREALLPFAKRVNLALAECGFPLCG
EEEEECCCCCCHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
GEVMASNPKWCLSLEEWQDTFDRWIYHGAPMDLLHATIFFDFRPLYGAVGLGVELRDWLR
CCEEECCCCEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
AAAPKNSRFLHQLAVNALRNRPPLGVVRDFVTGDDHAVDLKLNGITPFVDAARIFSLAIG
HHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCC
GTQTNTLERLREIAAPLKLASRDVDAYCEAFLFIQLLRLRLHHGQSEQGASLGNRVDPDT
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH
LNNLDSRILKEAFRQARKLQTKLGLHYQV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]